BLASTX nr result

ID: Coptis24_contig00013836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013836
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265472.1| PREDICTED: proteasomal ubiquitin receptor AD...   122   2e-25
ref|XP_002522941.1| adhesion regulating molecule, putative [Rici...   120   5e-25
gb|AFK46139.1| unknown [Medicago truncatula]                          120   7e-25
gb|AFK36183.1| unknown [Medicago truncatula]                          120   7e-25
ref|XP_003630599.1| Proteasomal ubiquitin receptor ADRM1 [Medica...   120   7e-25

>ref|XP_002265472.1| PREDICTED: proteasomal ubiquitin receptor ADRM1 [Vitis vinifera]
           gi|297736028|emb|CBI24066.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  122 bits (305), Expect = 2e-25
 Identities = 57/66 (86%), Positives = 63/66 (95%)
 Frame = +3

Query: 288 ETLHLEQRLASYLPEGQWTPEDLLELLQSPPFRQQVEAFTYVLRTGEVDLSQFGIDPSKY 467
           ETL +EQRLASYLPEGQW PEDLLELLQSPPFRQQV++FTYVLRTG++DLSQFGIDPSKY
Sbjct: 217 ETLPMEQRLASYLPEGQWNPEDLLELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKY 276

Query: 468 KLSVLS 485
           K +VLS
Sbjct: 277 KFTVLS 282



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 35/45 (77%), Positives = 38/45 (84%)
 Frame = +1

Query: 1   EDDISSRAGNLVDLNFGAEGTSEVTSSSGPVRLEDLQRILSNIAP 135
           EDDISSRAGNLV  + GAE TS+VTS SGPV+L DLQRILSNI P
Sbjct: 146 EDDISSRAGNLVGPSLGAEVTSDVTSLSGPVKLADLQRILSNIEP 190


>ref|XP_002522941.1| adhesion regulating molecule, putative [Ricinus communis]
           gi|223537835|gb|EEF39452.1| adhesion regulating
           molecule, putative [Ricinus communis]
          Length = 557

 Score =  120 bits (301), Expect = 5e-25
 Identities = 55/66 (83%), Positives = 64/66 (96%)
 Frame = +3

Query: 288 ETLHLEQRLASYLPEGQWTPEDLLELLQSPPFRQQVEAFTYVLRTGEVDLSQFGIDPSKY 467
           +TL LE+RLASYLPEGQWTPED+LELLQSPPFRQQ+++FTYVLRTG++DLSQFGIDPSKY
Sbjct: 454 DTLPLEERLASYLPEGQWTPEDILELLQSPPFRQQMDSFTYVLRTGQIDLSQFGIDPSKY 513

Query: 468 KLSVLS 485
           K +VLS
Sbjct: 514 KFTVLS 519



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +1

Query: 1   EDDISSRAGNLVDLNFGAEGTSEVTSSSGPVRLEDLQRILSNI 129
           EDDISSRAGNLV  N GAE  S+V+SSSGPV+LEDLQRILSNI
Sbjct: 384 EDDISSRAGNLVVPNLGAE-VSDVSSSSGPVKLEDLQRILSNI 425


>gb|AFK46139.1| unknown [Medicago truncatula]
          Length = 101

 Score =  120 bits (300), Expect = 7e-25
 Identities = 56/66 (84%), Positives = 63/66 (95%)
 Frame = +3

Query: 288 ETLHLEQRLASYLPEGQWTPEDLLELLQSPPFRQQVEAFTYVLRTGEVDLSQFGIDPSKY 467
           ETL LEQRLASYLPEG W+PED+LELLQSPPFRQQV++FTYVLRTG++DLSQFGIDPSKY
Sbjct: 2   ETLPLEQRLASYLPEGTWSPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKY 61

Query: 468 KLSVLS 485
           K +VLS
Sbjct: 62  KFTVLS 67


>gb|AFK36183.1| unknown [Medicago truncatula]
          Length = 316

 Score =  120 bits (300), Expect = 7e-25
 Identities = 56/66 (84%), Positives = 63/66 (95%)
 Frame = +3

Query: 288 ETLHLEQRLASYLPEGQWTPEDLLELLQSPPFRQQVEAFTYVLRTGEVDLSQFGIDPSKY 467
           ETL LEQRLASYLPEG W+PED+LELLQSPPFRQQV++FTYVLRTG++DLSQFGIDPSKY
Sbjct: 217 ETLPLEQRLASYLPEGTWSPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKY 276

Query: 468 KLSVLS 485
           K +VLS
Sbjct: 277 KFTVLS 282



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   EDDISSRAGNLVDLNFGAEGTSEVTSSSGPVRLEDLQRILSNIAP 135
           EDDISSRA NLV  NFG + TS+VT SSGPV+L DLQRILSNI P
Sbjct: 146 EDDISSRAANLVVPNFGVDATSDVT-SSGPVKLADLQRILSNIGP 189


>ref|XP_003630599.1| Proteasomal ubiquitin receptor ADRM1 [Medicago truncatula]
           gi|355524621|gb|AET05075.1| Proteasomal ubiquitin
           receptor ADRM1 [Medicago truncatula]
          Length = 312

 Score =  120 bits (300), Expect = 7e-25
 Identities = 56/66 (84%), Positives = 63/66 (95%)
 Frame = +3

Query: 288 ETLHLEQRLASYLPEGQWTPEDLLELLQSPPFRQQVEAFTYVLRTGEVDLSQFGIDPSKY 467
           ETL LEQRLASYLPEG W+PED+LELLQSPPFRQQV++FTYVLRTG++DLSQFGIDPSKY
Sbjct: 213 ETLPLEQRLASYLPEGTWSPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKY 272

Query: 468 KLSVLS 485
           K +VLS
Sbjct: 273 KFTVLS 278



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   EDDISSRAGNLVDLNFGAEGTSEVTSSSGPVRLEDLQRILSNIAP 135
           EDDISSRA NLV  NFG + TS+VT SSGPV+L DLQRILSNI P
Sbjct: 142 EDDISSRAANLVVPNFGVDATSDVT-SSGPVKLADLQRILSNIGP 185


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