BLASTX nr result

ID: Coptis24_contig00013835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013835
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525677.1| conserved hypothetical protein [Ricinus comm...   231   5e-59
ref|XP_002319730.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56
ref|XP_002319731.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-55
ref|XP_003524663.1| PREDICTED: uncharacterized protein LOC100807...   218   4e-55
ref|XP_002276331.1| PREDICTED: uncharacterized protein LOC100253...   216   1e-54

>ref|XP_002525677.1| conserved hypothetical protein [Ricinus communis]
            gi|223534977|gb|EEF36660.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1000

 Score =  231 bits (589), Expect = 5e-59
 Identities = 109/130 (83%), Positives = 119/130 (91%)
 Frame = -3

Query: 392  RLPANMDPRISYVDAVGSDELDEEFDTFPTTRSADQVRVRYDRLRALAGRVQSLLGDIAA 213
            R+P NMDPR+SYVDAVG DELDEEFD FPTTRSAD VR+RYDRLRAL+GR Q+LLGD+AA
Sbjct: 865  RVPHNMDPRLSYVDAVGPDELDEEFDGFPTTRSADVVRIRYDRLRALSGRAQTLLGDLAA 924

Query: 212  QGERVEALMNWRDPRATGIFVVFCLLASLVFYVVPFRGFVLGAGFYYLRHPRFRGDMPSV 33
            QGER+EAL NWRDPRATGIFVVFCL ASLVFYVVPF+ FVLGAGFYY RHP FR DMPS+
Sbjct: 925  QGERLEALFNWRDPRATGIFVVFCLFASLVFYVVPFKVFVLGAGFYYFRHPMFRHDMPSI 984

Query: 32   PVNFFRRLPS 3
            P+NFFRRLPS
Sbjct: 985  PINFFRRLPS 994


>ref|XP_002319730.1| predicted protein [Populus trichocarpa] gi|222858106|gb|EEE95653.1|
            predicted protein [Populus trichocarpa]
          Length = 996

 Score =  223 bits (569), Expect = 1e-56
 Identities = 107/130 (82%), Positives = 116/130 (89%)
 Frame = -3

Query: 392  RLPANMDPRISYVDAVGSDELDEEFDTFPTTRSADQVRVRYDRLRALAGRVQSLLGDIAA 213
            R+P NMD R+SYVD VG DELDEEFD FPTTRS D VR+RYDRLRALAGR Q+LLGD AA
Sbjct: 861  RVPLNMDSRLSYVDMVGPDELDEEFDGFPTTRSQDVVRIRYDRLRALAGRAQTLLGDFAA 920

Query: 212  QGERVEALMNWRDPRATGIFVVFCLLASLVFYVVPFRGFVLGAGFYYLRHPRFRGDMPSV 33
             GER+EAL NWRDPRATGIFVVFCL+ASLVFYVVPF+ FVLG GFYYLRHPRFR DMPS+
Sbjct: 921  HGERLEALWNWRDPRATGIFVVFCLVASLVFYVVPFKVFVLGFGFYYLRHPRFRDDMPSI 980

Query: 32   PVNFFRRLPS 3
            PV+FFRRLPS
Sbjct: 981  PVSFFRRLPS 990


>ref|XP_002319731.1| predicted protein [Populus trichocarpa] gi|222858107|gb|EEE95654.1|
            predicted protein [Populus trichocarpa]
          Length = 993

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/130 (80%), Positives = 116/130 (89%)
 Frame = -3

Query: 392  RLPANMDPRISYVDAVGSDELDEEFDTFPTTRSADQVRVRYDRLRALAGRVQSLLGDIAA 213
            R+P N+D R+SYVD VG DELDEEFD FP+TRS D VR+RYDRLRALAGR Q+LLGD AA
Sbjct: 858  RVPLNIDSRLSYVDMVGLDELDEEFDGFPSTRSQDVVRIRYDRLRALAGRAQTLLGDFAA 917

Query: 212  QGERVEALMNWRDPRATGIFVVFCLLASLVFYVVPFRGFVLGAGFYYLRHPRFRGDMPSV 33
             GER+EAL NWRDPRATGIFVVFCL+ASLVFYV+PF+ FVLG GFYYLRHPRFR DMPSV
Sbjct: 918  HGERLEALWNWRDPRATGIFVVFCLVASLVFYVIPFKVFVLGFGFYYLRHPRFRDDMPSV 977

Query: 32   PVNFFRRLPS 3
            PV+FFRRLPS
Sbjct: 978  PVSFFRRLPS 987


>ref|XP_003524663.1| PREDICTED: uncharacterized protein LOC100807205 [Glycine max]
          Length = 972

 Score =  218 bits (555), Expect = 4e-55
 Identities = 102/130 (78%), Positives = 114/130 (87%)
 Frame = -3

Query: 392  RLPANMDPRISYVDAVGSDELDEEFDTFPTTRSADQVRVRYDRLRALAGRVQSLLGDIAA 213
            R+P NMDPR+SYVD V  DELDEEFD FPTTR A+ VR+RYDRLRALAGR Q+LLGD+AA
Sbjct: 837  RVPQNMDPRMSYVDMVSLDELDEEFDGFPTTRPAEVVRIRYDRLRALAGRAQTLLGDVAA 896

Query: 212  QGERVEALMNWRDPRATGIFVVFCLLASLVFYVVPFRGFVLGAGFYYLRHPRFRGDMPSV 33
            QGER+EAL +WRDPRATG+F V CL+ SL+FY VPFRGFVL AGFYYLRHPRFR DMPS+
Sbjct: 897  QGERLEALFSWRDPRATGLFAVLCLVMSLLFYAVPFRGFVLVAGFYYLRHPRFRDDMPSI 956

Query: 32   PVNFFRRLPS 3
            P NFFRRLPS
Sbjct: 957  PANFFRRLPS 966


>ref|XP_002276331.1| PREDICTED: uncharacterized protein LOC100253604 [Vitis vinifera]
          Length = 996

 Score =  216 bits (551), Expect = 1e-54
 Identities = 102/130 (78%), Positives = 115/130 (88%)
 Frame = -3

Query: 392  RLPANMDPRISYVDAVGSDELDEEFDTFPTTRSADQVRVRYDRLRALAGRVQSLLGDIAA 213
            R+  +MD R+SY +A+ +DELDEEFD+FPT +S DQVR RYDRLR LAGR Q+LLGD+AA
Sbjct: 861  RVLLSMDTRLSYAEAISADELDEEFDSFPTIKSIDQVRQRYDRLRILAGRAQTLLGDMAA 920

Query: 212  QGERVEALMNWRDPRATGIFVVFCLLASLVFYVVPFRGFVLGAGFYYLRHPRFRGDMPSV 33
            QGER+EAL NWRDPRATG+FVVFCL+ASLVFY VPFR FVLG GFYYLRHPRFRGDMPSV
Sbjct: 921  QGERLEALFNWRDPRATGLFVVFCLVASLVFYTVPFRAFVLGWGFYYLRHPRFRGDMPSV 980

Query: 32   PVNFFRRLPS 3
            P NFFRRLPS
Sbjct: 981  PFNFFRRLPS 990


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