BLASTX nr result

ID: Coptis24_contig00013832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013832
         (1422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280044.1| PREDICTED: uncharacterized protein LOC100250...    87   2e-24
emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera]    81   2e-23
ref|XP_003523998.1| PREDICTED: uncharacterized protein LOC100802...    79   5e-22
ref|XP_002313586.1| predicted protein [Populus trichocarpa] gi|1...    78   6e-20
gb|ACJ85037.1| unknown [Medicago truncatula]                           79   2e-18

>ref|XP_002280044.1| PREDICTED: uncharacterized protein LOC100250489 [Vitis vinifera]
          Length = 290

 Score = 86.7 bits (213), Expect(2) = 2e-24
 Identities = 52/134 (38%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
 Frame = +2

Query: 386 MIDSNQNAHGLINPGTRLVSREKHQPAEARKTALRDLQNAN-TMVALQTANRGPTL-DSF 559
           MI+S  N++ L + G+ L +  K  P   +K  LRD+QN N +++   T + G ++ D+ 
Sbjct: 1   MINSKLNSNRLGDNGSGLPTYHKQPPLAIKKIPLRDVQNDNRSLLHSHTESEGGSIADAI 60

Query: 560 KVSGTKRSTPEFPMGPPCRQSPSSNGTNGNFVYMRRKSEQEGEKINTFGNLDNNGGCPQS 739
           K SGTKR TP+ P  PPC Q  SSNG N + VY RR+ E E  K       + N     S
Sbjct: 61  KTSGTKRLTPDCPQSPPCHQFFSSNGANDHLVYARRRFESELGKRRILDLPNKNADNLHS 120

Query: 740 RQFSHGIQETPRQQ 781
            QF   +Q+ P+QQ
Sbjct: 121 TQFCQNMQQIPQQQ 134



 Score = 53.9 bits (128), Expect(2) = 2e-24
 Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +3

Query: 810  AFAHIPGASLNPYPSGGPSLPVSLGKPVDALPVRELNH-PAGSPAVIPLDSQKEDDQHFM 986
            AFA IP ASL  +  G PS+P+S+GKP + L   E N+    S     + S++ DDQ   
Sbjct: 147  AFAPIPLASLVTFAFGEPSVPLSMGKPSNELLDVESNYLKVTSEVPHSVHSKETDDQQRK 206

Query: 987  ERFHRLQAFLKSYDNSSHEEYTQ 1055
            ERF RLQ  LK  D     +Y Q
Sbjct: 207  ERFLRLQKVLKQCDEFDQNDYIQ 229


>emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera]
          Length = 511

 Score = 80.9 bits (198), Expect(2) = 2e-23
 Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
 Frame = +2

Query: 428 GTRLVSREKHQPAEARKTALRDLQNAN-TMVALQTANRGPTL-DSFKVSGTKRSTPEFPM 601
           G+ L +  K  P   +K  LRD+QN N +++   T + G ++ D+ K SGTKR TP+ P 
Sbjct: 82  GSGLPTYHKQPPXAIKKIPLRDVQNDNRSLLHXHTESEGGSIADAIKTSGTKRLTPDCPQ 141

Query: 602 GPPCRQSPSSNGTNGNFVYMRRKSEQEGEKINTFGNLDNNGGCPQSRQFSHGIQETPRQQ 781
            PPC Q  SSNG N + VY RR+ E E  K       + N     S QF   +Q+ P QQ
Sbjct: 142 SPPCHQFFSSNGANDHLVYARRRFESELGKRRILDXPNKNADNLHSTQFCQNMQQIPZQQ 201



 Score = 55.8 bits (133), Expect(2) = 2e-23
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +3

Query: 810  AFAHIPGASLNPYPSGGPSLPVSLGKPVDALPVRELNH-PAGSPAVIPLDSQKEDDQHFM 986
            AFA IP ASL  +  G PS+P+S+GKP + L   E N+    S     + S++ DDQ   
Sbjct: 214  AFAPIPLASLVTFAFGEPSVPLSMGKPSNELLDVESNYLKVTSEVPHSVHSKETDDQQRK 273

Query: 987  ERFHRLQAFLKSYDNSSHEEYTQT 1058
            ERF RLQ  LK  D     +Y QT
Sbjct: 274  ERFLRLQKVLKQCDEFDQNDYIQT 297


>ref|XP_003523998.1| PREDICTED: uncharacterized protein LOC100802245 [Glycine max]
          Length = 306

 Score = 78.6 bits (192), Expect(2) = 5e-22
 Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
 Frame = +2

Query: 374 IVAKMIDSNQNAHGLINPGTRLVSREKHQPAEARKTALRDLQNANTMVALQTA------- 532
           ++ + IDS    + L N    L +R+K Q   A KTALRDLQN N ++   +        
Sbjct: 1   MIQQGIDSKFCEYSLGNCKMDLPNRDK-QLTVAVKTALRDLQNDNKIMVPTSVGSSSFLK 59

Query: 533 NRGPTLDSFKVSGTKRSTPEFPMGPPCRQSPSSNGTNGNFVYMRRKSEQEGEKINTFGNL 712
           ++ P  DS +VSGTKR   ++P+    +QSPS+N  NG+ VY+RRKSE E  K   + N 
Sbjct: 60  DKDPGTDSNRVSGTKRPLSDYPLNHQLQQSPSNNAANGHLVYVRRKSEAELSKGIAYENP 119

Query: 713 DNNGGCPQSRQ 745
             N  C  SRQ
Sbjct: 120 SINAYCSHSRQ 130



 Score = 53.5 bits (127), Expect(2) = 5e-22
 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
 Frame = +3

Query: 786  LQGPKG--FSAFAHIPGASLNPYPSGGPSLPVSLGKPVDALPVRELNHPAGSPAVIPLDS 959
            L+ PK   F AFA  P AS +   SG PS+P+SLGK    L   E N+   S     + +
Sbjct: 150  LKEPKASCFPAFAPFPMAS-SMNSSGKPSVPISLGKSAKKLAPVESNYVTASSGPTTIGN 208

Query: 960  QKE-DDQHFMERFHRLQAFLKSYDNSSHEEYTQ 1055
             K   + H+ ER+ +LQ FL+  D S  EEY Q
Sbjct: 209  PKGLKNLHWDERYQQLQMFLRKLDQSDREEYIQ 241


>ref|XP_002313586.1| predicted protein [Populus trichocarpa] gi|118483646|gb|ABK93717.1|
           unknown [Populus trichocarpa]
           gi|222849994|gb|EEE87541.1| predicted protein [Populus
           trichocarpa]
          Length = 278

 Score = 78.2 bits (191), Expect(2) = 6e-20
 Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
 Frame = +2

Query: 374 IVAKMIDSNQNAHGLINPGTRLVSREKHQPAEARKTALRDLQNANTMV-----ALQTANR 538
           +V + IDS  + +GL N  T L + +K  P   +KTALRD+QN N +      +  + +R
Sbjct: 1   MVQQTIDSKFSEYGLSNTDTNLSTHDKQFPLVLKKTALRDVQNENRIPKSVGNSPLSKDR 60

Query: 539 GPTLDSFKVSGTKRSTPEFPMGPPC--RQSPSSNGTNGNFVYMRRKSEQEGEKI 694
           G T++SFKVSG KR + E  M PP    +S SS   N + VY+RRKSE E  K+
Sbjct: 61  GQTMNSFKVSGAKRPSSEGLMNPPVLRYESSSSGAPNSHLVYVRRKSEAETGKL 114



 Score = 47.0 bits (110), Expect(2) = 6e-20
 Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +3

Query: 765  KHPGNKSLQGPKGFSAFAHIPGASLNPYPSGG-PSLPVSLGKP-VDALPVRELNHPAGSP 938
            K P   SLQ      A A +P AS  P  S G PS+P+ LG+  +   P     HP GS 
Sbjct: 129  KEPTVSSLQ------ALAPMPVAS--PISSSGKPSVPLPLGQSSIRFAPAESSCHPVGST 180

Query: 939  AVIPLDSQKEDDQHFMERFHRLQAFLKSYDNSSHEEYTQ 1055
            A    +   E + H+ ER+ +LQ  LK  D S  EEY Q
Sbjct: 181  APSS-NPMAEKNMHWEERYCQLQILLKKLDESDQEEYAQ 218


>gb|ACJ85037.1| unknown [Medicago truncatula]
          Length = 299

 Score = 79.0 bits (193), Expect(2) = 2e-18
 Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
 Frame = +2

Query: 374 IVAKMIDSNQNAHGLINPGTRLVSREKHQPAEARKTALRDLQNAN-TMVALQTAN----- 535
           +V + IDS    + L N    L + +K Q    +KT+L+DLQN N  MV     N     
Sbjct: 1   MVQQGIDSRFCEYNLGNSKMDLPNGDK-QLVILKKTSLKDLQNDNKNMVPTSVGNSSFLK 59

Query: 536 -RGPTLDSFKVSGTKRSTPEFPMGPPCRQSPSSNGTNGNFVYMRRKSEQEGEKINTFGNL 712
            + P  DS + +GTKR + ++P+    +QSP +N  NG+ VY+RRKSE E  K   F N 
Sbjct: 60  DKDPGTDSNRATGTKRPSSDYPVIHHLQQSPGNNAANGHLVYVRRKSEGEMSKSTAFENT 119

Query: 713 DNNGGCPQSRQ 745
             NG CP SRQ
Sbjct: 120 SINGCCPHSRQ 130



 Score = 40.8 bits (94), Expect(2) = 2e-18
 Identities = 28/82 (34%), Positives = 41/82 (50%)
 Frame = +3

Query: 810  AFAHIPGASLNPYPSGGPSLPVSLGKPVDALPVRELNHPAGSPAVIPLDSQKEDDQHFME 989
            AF+  P AS +   SG PS+P+SLG+    L   E N+ A S      + +   + H+ E
Sbjct: 154  AFSPFPMAS-SISTSGKPSIPISLGRSGMMLTPVESNYVAASSGHTIGNPKVFKNVHWEE 212

Query: 990  RFHRLQAFLKSYDNSSHEEYTQ 1055
            ++  LQ  L+  D S   EY Q
Sbjct: 213  QYQHLQMLLRKLDQSDQAEYIQ 234


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