BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013829
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]    67   1e-09
gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa s...    60   2e-07
gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]        59   5e-07
ref|XP_003622670.1| B3 domain-containing protein [Medicago trunc...    55   5e-06

>emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]
          Length = 749

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/70 (50%), Positives = 46/70 (65%)
 Frame = +2

Query: 104 SAVEQEASSFFKIINSSILESQQLGIPKKFVCKHRKYLPDVVVLKVPSGDVWRVEVKRVD 283
           S +      FFKII+S+IL    LGIPK+FV ++ K L +++ LKVPSG VW+V +KR D
Sbjct: 16  STISATRPHFFKIIHSTILRDGTLGIPKRFVSRYGKNLSNIMFLKVPSGAVWQVGLKRGD 75

Query: 284 ENGVVWLQNG 313
             G VWL  G
Sbjct: 76  --GEVWLDGG 83


>gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa subsp. campestris]
          Length = 329

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +2

Query: 131 FFKIINSSILESQQLGIPKKFVCKHRKYLPDVVVLKVPSGDVWRVEVKRVDENGVVWLQN 310
           F K+I SS ++ ++L +P KFV K +  L   V L VP G VWRV +++ D N  +W Q+
Sbjct: 6   FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWFQD 65

Query: 311 GLQ 319
           G Q
Sbjct: 66  GWQ 68


>gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]
          Length = 329

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/63 (41%), Positives = 39/63 (61%)
 Frame = +2

Query: 131 FFKIINSSILESQQLGIPKKFVCKHRKYLPDVVVLKVPSGDVWRVEVKRVDENGVVWLQN 310
           F K+I SS ++ ++L +P KFV + +  L   V L VP G VWRV +++ D N  +W Q+
Sbjct: 6   FHKLIFSSTIQEKRLRVPDKFVSRFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWFQD 65

Query: 311 GLQ 319
           G Q
Sbjct: 66  GWQ 68


>ref|XP_003622670.1| B3 domain-containing protein [Medicago truncatula]
           gi|355497685|gb|AES78888.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 116

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/61 (44%), Positives = 39/61 (63%)
 Frame = +2

Query: 131 FFKIINSSILESQQLGIPKKFVCKHRKYLPDVVVLKVPSGDVWRVEVKRVDENGVVWLQN 310
           FFKII    L   +L IP+KFV K+R  LP+ + LK PSG  W++++ ++D  G +W Q 
Sbjct: 13  FFKIITIQSLLVGKLMIPRKFVEKYRNCLPNAIYLKTPSGAKWKLDLVKID--GKIWFQK 70

Query: 311 G 313
           G
Sbjct: 71  G 71