BLASTX nr result

ID: Coptis24_contig00013809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013809
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sat...   248   1e-63
dbj|BAD35445.1| putative yip1 interacting factor [Oryza sativa J...   247   3e-63
ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]       247   3e-63
gb|EEC80990.1| hypothetical protein OsI_23725 [Oryza sativa Indi...   247   3e-63
gb|EAZ37663.1| hypothetical protein OsJ_21998 [Oryza sativa Japo...   247   3e-63

>ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sativus]
            gi|449502274|ref|XP_004161595.1| PREDICTED: protein
            YIF1B-A-like [Cucumis sativus]
          Length = 269

 Score =  248 bits (634), Expect = 1e-63
 Identities = 120/155 (77%), Positives = 131/155 (84%)
 Frame = +1

Query: 640  IIRDRLGAYGERILGSSSEYVQSNVREYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGHW 819
            +IR  LGAYGE+I GSSSEYVQSN+  YFSDPQYYFQVN QYVRNKLKV+LFPFLHRGHW
Sbjct: 34   LIRGGLGAYGEKIFGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHW 93

Query: 820  TRITEPVGGRLSYKPPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFTK 999
            TRIT+P+GGRLSYKPP +DINAPDLYIP M+FGTYVVLAGF+LGL GKF+PEALS  F K
Sbjct: 94   TRITDPIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIK 153

Query: 1000 GXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGY 1104
            G           KV+L SLGSGEAPLLDIVAYAGY
Sbjct: 154  GLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGY 188


>dbj|BAD35445.1| putative yip1 interacting factor [Oryza sativa Japonica Group]
            gi|51090829|dbj|BAD35357.1| putative yip1 interacting
            factor [Oryza sativa Japonica Group]
          Length = 264

 Score =  247 bits (631), Expect = 3e-63
 Identities = 117/155 (75%), Positives = 134/155 (86%)
 Frame = +1

Query: 640  IIRDRLGAYGERILGSSSEYVQSNVREYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGHW 819
            +IR  LGAYGE+ LGSSSE++QSN+ +Y S+PQYYFQVN QYVRNKLKVILFPFLHRGHW
Sbjct: 31   LIRSGLGAYGEKFLGSSSEFMQSNITQYLSNPQYYFQVNSQYVRNKLKVILFPFLHRGHW 90

Query: 820  TRITEPVGGRLSYKPPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFTK 999
            TRITEPVGGRLSYKPP  DINAPDLYIPLM+FGTYVV+AG+ LG++G+F+PEAL+LQFTK
Sbjct: 91   TRITEPVGGRLSYKPPIQDINAPDLYIPLMAFGTYVVIAGYALGVLGRFTPEALTLQFTK 150

Query: 1000 GXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGY 1104
            G           +V LY+LGSGEAPLLDIVAYAGY
Sbjct: 151  GLLGWFLQVILIRVLLYTLGSGEAPLLDIVAYAGY 185


>ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]
          Length = 273

 Score =  247 bits (631), Expect = 3e-63
 Identities = 120/155 (77%), Positives = 131/155 (84%)
 Frame = +1

Query: 640  IIRDRLGAYGERILGSSSEYVQSNVREYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGHW 819
            +IR  LGAYGE+ILGSSSEYVQSN+  YFSDPQYYFQVN  YV+NKLKV+LFPFLHRGHW
Sbjct: 38   LIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHW 97

Query: 820  TRITEPVGGRLSYKPPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFTK 999
            TRITEPVGGRLSYKPP +DINAPDLYIPLM+FGTYVVLAG +LGL GKFSPEAL+  F K
Sbjct: 98   TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 157

Query: 1000 GXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGY 1104
            G           KV+L SLGSGEAPLLDI+AYAGY
Sbjct: 158  GLVGWFMQTALLKVTLLSLGSGEAPLLDIIAYAGY 192


>gb|EEC80990.1| hypothetical protein OsI_23725 [Oryza sativa Indica Group]
          Length = 264

 Score =  247 bits (631), Expect = 3e-63
 Identities = 117/155 (75%), Positives = 134/155 (86%)
 Frame = +1

Query: 640  IIRDRLGAYGERILGSSSEYVQSNVREYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGHW 819
            +IR  LGAYGE+ LGSSSE++QSN+ +Y S+PQYYFQVN QYVRNKLKVILFPFLHRGHW
Sbjct: 31   LIRSGLGAYGEKFLGSSSEFMQSNITQYLSNPQYYFQVNSQYVRNKLKVILFPFLHRGHW 90

Query: 820  TRITEPVGGRLSYKPPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFTK 999
            TRITEPVGGRLSYKPP  DINAPDLYIPLM+FGTYVV+AG+ LG++G+F+PEAL+LQFTK
Sbjct: 91   TRITEPVGGRLSYKPPIQDINAPDLYIPLMAFGTYVVIAGYALGVLGRFTPEALTLQFTK 150

Query: 1000 GXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGY 1104
            G           +V LY+LGSGEAPLLDIVAYAGY
Sbjct: 151  GLLGWFLQVILIRVLLYTLGSGEAPLLDIVAYAGY 185


>gb|EAZ37663.1| hypothetical protein OsJ_21998 [Oryza sativa Japonica Group]
          Length = 372

 Score =  247 bits (631), Expect = 3e-63
 Identities = 117/155 (75%), Positives = 134/155 (86%)
 Frame = +1

Query: 640  IIRDRLGAYGERILGSSSEYVQSNVREYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGHW 819
            +IR  LGAYGE+ LGSSSE++QSN+ +Y S+PQYYFQVN QYVRNKLKVILFPFLHRGHW
Sbjct: 139  LIRSGLGAYGEKFLGSSSEFMQSNITQYLSNPQYYFQVNSQYVRNKLKVILFPFLHRGHW 198

Query: 820  TRITEPVGGRLSYKPPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFTK 999
            TRITEPVGGRLSYKPP  DINAPDLYIPLM+FGTYVV+AG+ LG++G+F+PEAL+LQFTK
Sbjct: 199  TRITEPVGGRLSYKPPIQDINAPDLYIPLMAFGTYVVIAGYALGVLGRFTPEALTLQFTK 258

Query: 1000 GXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGY 1104
            G           +V LY+LGSGEAPLLDIVAYAGY
Sbjct: 259  GLLGWFLQVILIRVLLYTLGSGEAPLLDIVAYAGY 293


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