BLASTX nr result

ID: Coptis24_contig00013803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013803
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535079.1| PREDICTED: probable LRR receptor-like serine...    63   2e-08
ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine...    61   1e-07
emb|CAN83900.1| hypothetical protein VITISV_034202 [Vitis vinifera]    58   7e-07
ref|XP_003531816.1| PREDICTED: probable LRR receptor-like serine...    57   1e-06
ref|XP_003530399.1| PREDICTED: probable LRR receptor-like serine...    56   3e-06

>ref|XP_003535079.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Glycine max]
          Length = 1027

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -2

Query: 301  LTGDIEVSTVASRPGYLTDWQFNDMSIFNGSPESSTSEAPLHRSNSLSSASKVSGADYSP 122
            L GDIEVSTV SRPGYLTDW+F+D   F     +  S+   +  NS +S S V GADYSP
Sbjct: 954  LLGDIEVSTVTSRPGYLTDWKFDDEISFMTEVATKGSDTSFY--NSSASFSIVGGADYSP 1011

Query: 121  TTVTQAMSH 95
               ++ + H
Sbjct: 1012 IDASKPILH 1020


>ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Vitis vinifera]
          Length = 1028

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/74 (47%), Positives = 44/74 (59%)
 Frame = -2

Query: 301  LTGDIEVSTVASRPGYLTDWQFNDMSIFNGSPESSTSEAPLHRSNSLSSASKVSGADYSP 122
            L+GDIEVS V ++PGYLTDW+FND S F    E+S         NS +S S  + AD SP
Sbjct: 962  LSGDIEVSRVTTKPGYLTDWKFNDASSF--MSENS-------HFNSSTSISMAADADRSP 1012

Query: 121  TTVTQAMSH*VTGE 80
             T T+   H + GE
Sbjct: 1013 VTATKTKIHEIIGE 1026


>emb|CAN83900.1| hypothetical protein VITISV_034202 [Vitis vinifera]
          Length = 946

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = -2

Query: 301  LTGDIEVSTVASRPGYLTDWQFNDMSIFNGSPESSTSEAPLHRSNSLSSASKVSGADYSP 122
            L+GDIE S V ++PGYLTDW+FND+S F            +H  NSL+S S  + AD SP
Sbjct: 880  LSGDIEASRVPTKPGYLTDWKFNDVSSF--------MSENIH-FNSLASISMAADADPSP 930

Query: 121  TTVTQAMSH*VTGE 80
             T T+   + + GE
Sbjct: 931  VTATKTELNEIVGE 944


>ref|XP_003531816.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Glycine max]
          Length = 1034

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = -2

Query: 301  LTGDIEVSTVASRPGYLTDWQFNDMSIFNGSPESSTSEAPLHRSNSLSSASKVSGAD-YS 125
            L+GDIEVSTV S+PGYL+DW+F D+S F    E   S+   +  NS  S S + G D YS
Sbjct: 960  LSGDIEVSTVTSKPGYLSDWKFEDVSSFMTGIEIKGSDT--NYQNSSGSTSMMGGVDYYS 1017

Query: 124  PTTVTQ 107
            P  V++
Sbjct: 1018 PRDVSK 1023


>ref|XP_003530399.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Glycine max]
          Length = 1029

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/60 (48%), Positives = 36/60 (60%)
 Frame = -2

Query: 301  LTGDIEVSTVASRPGYLTDWQFNDMSIFNGSPESSTSEAPLHRSNSLSSASKVSGADYSP 122
            L+GDIEV TV S+PGYL+DW+F D+S F    E   S+      NS  S S + G DY P
Sbjct: 955  LSGDIEVGTVPSKPGYLSDWKFEDVSSFMTGIEIKGSDTSY--QNSSGSTSMMGGVDYYP 1012


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