BLASTX nr result

ID: Coptis24_contig00013791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013791
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase ...   166   5e-39
ref|XP_002516509.1| peptidyl-tRNA hydrolase, putative [Ricinus c...   164   1e-38
ref|XP_002309541.1| predicted protein [Populus trichocarpa] gi|1...   160   2e-37
gb|AFW82511.1| hypothetical protein ZEAMMB73_250734 [Zea mays] g...   158   8e-37
gb|AFK36548.1| unknown [Lotus japonicus]                              158   8e-37

>ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase 2-like [Vitis vinifera]
           gi|296081837|emb|CBI20842.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  166 bits (419), Expect = 5e-39
 Identities = 86/112 (76%), Positives = 92/112 (82%)
 Frame = +1

Query: 1   VLVVRQDLRMGVGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQQEMN 180
           VLVVRQDL+MG GKIASQCAHAATGMYA                GQ KIVV+CKNQQEMN
Sbjct: 82  VLVVRQDLKMGTGKIASQCAHAATGMYAELVQSQRSLLRQWEQCGQAKIVVTCKNQQEMN 141

Query: 181 KMKEMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 336
           K+KE AESIGLPTFVVADAGRTQV++GSKTVLAIGPGRKASVDS+TGK RLL
Sbjct: 142 KLKEAAESIGLPTFVVADAGRTQVLSGSKTVLAIGPGRKASVDSITGKQRLL 193


>ref|XP_002516509.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
           gi|223544329|gb|EEF45850.1| peptidyl-tRNA hydrolase,
           putative [Ricinus communis]
          Length = 195

 Score =  164 bits (415), Expect = 1e-38
 Identities = 84/112 (75%), Positives = 93/112 (83%)
 Frame = +1

Query: 1   VLVVRQDLRMGVGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQQEMN 180
           VLVVRQDL+MG GKIASQCAHAATGMY+                GQPKIVV+C+NQQEMN
Sbjct: 84  VLVVRQDLKMGAGKIASQCAHAATGMYSELMQSQQLLLSRWEQCGQPKIVVTCRNQQEMN 143

Query: 181 KMKEMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 336
           K++E A+SIGLPTFVVADAGRTQV+AGSKTVLAIGPG KASVD+VTGKLRLL
Sbjct: 144 KLQEAADSIGLPTFVVADAGRTQVLAGSKTVLAIGPGSKASVDAVTGKLRLL 195


>ref|XP_002309541.1| predicted protein [Populus trichocarpa] gi|118485090|gb|ABK94408.1|
           unknown [Populus trichocarpa]
           gi|222855517|gb|EEE93064.1| predicted protein [Populus
           trichocarpa]
          Length = 190

 Score =  160 bits (406), Expect = 2e-37
 Identities = 83/112 (74%), Positives = 89/112 (79%)
 Frame = +1

Query: 1   VLVVRQDLRMGVGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQQEMN 180
           V VVRQDL+MG GKIASQCAHAATGMYA                GQPKIVV+CKNQQEMN
Sbjct: 79  VFVVRQDLKMGAGKIASQCAHAATGMYAELIYSHRILLRQWEQSGQPKIVVTCKNQQEMN 138

Query: 181 KMKEMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 336
           K++E AE+IGLPTF VADAGRTQV AGSKTVLA+GPG K SVDSVTGKLRLL
Sbjct: 139 KIREAAENIGLPTFAVADAGRTQVSAGSKTVLAVGPGPKESVDSVTGKLRLL 190


>gb|AFW82511.1| hypothetical protein ZEAMMB73_250734 [Zea mays]
           gi|413949863|gb|AFW82512.1| hypothetical protein
           ZEAMMB73_250734 [Zea mays]
          Length = 202

 Score =  158 bits (400), Expect = 8e-37
 Identities = 80/112 (71%), Positives = 90/112 (80%)
 Frame = +1

Query: 1   VLVVRQDLRMGVGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQQEMN 180
           VLVVRQDL+MG GKIASQCAHAATG+YA                GQ KIV++CKNQQEMN
Sbjct: 91  VLVVRQDLKMGAGKIASQCAHAATGLYAELLSSNRGLLRQWEQLGQAKIVLTCKNQQEMN 150

Query: 181 KMKEMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 336
           ++KE AE  G+PTF+VADAGRTQV+AGSKTVLAIGPGRKA +DSVTGKLRLL
Sbjct: 151 RLKETAEHRGIPTFIVADAGRTQVLAGSKTVLAIGPGRKADIDSVTGKLRLL 202


>gb|AFK36548.1| unknown [Lotus japonicus]
          Length = 195

 Score =  158 bits (400), Expect = 8e-37
 Identities = 82/112 (73%), Positives = 90/112 (80%)
 Frame = +1

Query: 1   VLVVRQDLRMGVGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQQEMN 180
           VLVVRQDL+M  GK+ASQCAHAATGMYA                GQPKIVV+C+NQQEMN
Sbjct: 84  VLVVRQDLKMKSGKVASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCRNQQEMN 143

Query: 181 KMKEMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 336
           K+KE AESIGLPTFVVADAGRT+V AGSKTVLA+GPG KASVDSVTG+L LL
Sbjct: 144 KLKETAESIGLPTFVVADAGRTEVSAGSKTVLAVGPGPKASVDSVTGRLALL 195


Top