BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013785
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190989.1| 50S ribosomal protein L17 [Arabidopsis thaliana...   283   5e-74
gb|AAM63452.1| ribosomal protein L17-like protein [Arabidopsis t...   283   5e-74
ref|XP_002877962.1| hypothetical protein ARALYDRAFT_485818 [Arab...   281   1e-73
ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloro...   274   3e-71
emb|CBI38998.3| unnamed protein product [Vitis vinifera]              271   1e-70

>ref|NP_190989.1| 50S ribosomal protein L17 [Arabidopsis thaliana]
           gi|75311820|sp|Q9M385.1|RK17_ARATH RecName: Full=50S
           ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor
           gi|14030669|gb|AAK53009.1|AF375425_1
           AT3g54210/F24B22_170 [Arabidopsis thaliana]
           gi|6822067|emb|CAB70995.1| ribosomal protein L17-like
           protein [Arabidopsis thaliana]
           gi|21700779|gb|AAM70513.1| AT3g54210/F24B22_170
           [Arabidopsis thaliana] gi|22530904|gb|AAM96956.1|
           ribosomal protein L17-like protein [Arabidopsis
           thaliana] gi|23198410|gb|AAN15732.1| ribosomal protein
           L17-like protein [Arabidopsis thaliana]
           gi|332645678|gb|AEE79199.1| 50S ribosomal protein L17
           [Arabidopsis thaliana]
          Length = 211

 Score =  283 bits (723), Expect = 5e-74
 Identities = 141/160 (88%), Positives = 149/160 (93%)
 Frame = +3

Query: 246 IPSPLIPSFNGLSLHNPLLSMGSFEYTSFENSFVIIDNGGRIYAMRHGRKVPKLNRPPDQ 425
           I SP +PSF+GLS  NPLLS+G  ++ SFEN F I+D GGRIYAMRHGR+VPKLNRPPDQ
Sbjct: 52  ISSPSLPSFSGLSPVNPLLSIGLPDWQSFENGFKIVDGGGRIYAMRHGRRVPKLNRPPDQ 111

Query: 426 RKALLRGLITQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV 605
           RKALLRGL TQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV
Sbjct: 112 RKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV 171

Query: 606 HALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 725
           HALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 172 HALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 211


>gb|AAM63452.1| ribosomal protein L17-like protein [Arabidopsis thaliana]
          Length = 203

 Score =  283 bits (723), Expect = 5e-74
 Identities = 141/160 (88%), Positives = 149/160 (93%)
 Frame = +3

Query: 246 IPSPLIPSFNGLSLHNPLLSMGSFEYTSFENSFVIIDNGGRIYAMRHGRKVPKLNRPPDQ 425
           I SP +PSF+GLS  NPLLS+G  ++ SFEN F I+D GGRIYAMRHGR+VPKLNRPPDQ
Sbjct: 44  ISSPSLPSFSGLSPVNPLLSIGLPDWQSFENGFKIVDGGGRIYAMRHGRRVPKLNRPPDQ 103

Query: 426 RKALLRGLITQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV 605
           RKALLRGL TQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV
Sbjct: 104 RKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV 163

Query: 606 HALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 725
           HALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 164 HALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 203


>ref|XP_002877962.1| hypothetical protein ARALYDRAFT_485818 [Arabidopsis lyrata subsp.
           lyrata] gi|297323800|gb|EFH54221.1| hypothetical protein
           ARALYDRAFT_485818 [Arabidopsis lyrata subsp. lyrata]
          Length = 211

 Score =  281 bits (720), Expect = 1e-73
 Identities = 140/160 (87%), Positives = 149/160 (93%)
 Frame = +3

Query: 246 IPSPLIPSFNGLSLHNPLLSMGSFEYTSFENSFVIIDNGGRIYAMRHGRKVPKLNRPPDQ 425
           I SP +PSF+GLS  NPLLS+G  ++ SFEN F I+D GGRIYAMRHGR+VPKLNRPPDQ
Sbjct: 52  ISSPSLPSFSGLSPVNPLLSIGLPDWQSFENGFKIVDGGGRIYAMRHGRRVPKLNRPPDQ 111

Query: 426 RKALLRGLITQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV 605
           RKALLRGL TQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV
Sbjct: 112 RKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIV 171

Query: 606 HALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 725
           HALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIEL+
Sbjct: 172 HALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELL 211


>ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Vitis
           vinifera]
          Length = 198

 Score =  274 bits (700), Expect = 3e-71
 Identities = 135/159 (84%), Positives = 149/159 (93%)
 Frame = +3

Query: 249 PSPLIPSFNGLSLHNPLLSMGSFEYTSFENSFVIIDNGGRIYAMRHGRKVPKLNRPPDQR 428
           P P++PSF GL+  +PLLS+ S E TSFE++F IIDNGGRI AMRHGR+VPKLNRPPDQR
Sbjct: 40  PMPILPSFTGLAPLSPLLSLSSPESTSFEHNFTIIDNGGRISAMRHGRRVPKLNRPPDQR 99

Query: 429 KALLRGLITQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVH 608
           +ALLRGL TQLLK+GRIKTTRARASAMRK+VDKMITLAKDGSLHKRRQALG+IYEKQIVH
Sbjct: 100 RALLRGLTTQLLKYGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVH 159

Query: 609 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 725
           ALFAEVP+RYG+RNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 160 ALFAEVPDRYGDRNGGYTRIIRTLPRRGDNAPMAYIELV 198


>emb|CBI38998.3| unnamed protein product [Vitis vinifera]
          Length = 158

 Score =  271 bits (694), Expect = 1e-70
 Identities = 134/157 (85%), Positives = 148/157 (94%)
 Frame = +3

Query: 255 PLIPSFNGLSLHNPLLSMGSFEYTSFENSFVIIDNGGRIYAMRHGRKVPKLNRPPDQRKA 434
           P++PSF GL+  +PLLS+ S E TSFE++F IIDNGGRI AMRHGR+VPKLNRPPDQR+A
Sbjct: 2   PILPSFTGLAPLSPLLSLSSPESTSFEHNFTIIDNGGRISAMRHGRRVPKLNRPPDQRRA 61

Query: 435 LLRGLITQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHAL 614
           LLRGL TQLLK+GRIKTTRARASAMRK+VDKMITLAKDGSLHKRRQALG+IYEKQIVHAL
Sbjct: 62  LLRGLTTQLLKYGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHAL 121

Query: 615 FAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 725
           FAEVP+RYG+RNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 122 FAEVPDRYGDRNGGYTRIIRTLPRRGDNAPMAYIELV 158