BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013780
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]   320   5e-85
ref|XP_002530313.1| pentatricopeptide repeat-containing protein,...   317   2e-84
ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containi...   316   7e-84
ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [...   293   6e-77
emb|CAB83319.1| putative protein [Arabidopsis thaliana]               293   6e-77

>emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]
          Length = 347

 Score =  320 bits (819), Expect = 5e-85
 Identities = 164/236 (69%), Positives = 198/236 (83%), Gaps = 5/236 (2%)
 Frame = -1

Query: 894 RNTTKTITFSDADDEDEKNNITK----EMEKTKLPPPYDPFNKKPVIEEPNDPKDLQEIF 727
           R++TK I FS +D + +   + K    E++K+KLPPPYDPF+KKP IEEP DPKDLQ+IF
Sbjct: 115 RSSTK-INFSPSDSDSDSETMIKKTKHEIDKSKLPPPYDPFSKKPAIEEPKDPKDLQDIF 173

Query: 726 HKMRTEGLVNNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNAGGH 547
           HKMRTEGLV NA+KMFDALSKDGLTHEAMELF  IKD G+MPDVVAHTAVIEAY+NA G 
Sbjct: 174 HKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANA-GQ 232

Query: 546 SKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNLKDAKKYVLDMMDKGIKGPNVGTYT 367
           SKEAVKV++RML+SGV PNAYTYSVLIKGLA D  L +AKKYVL+MM KG++ PN GTYT
Sbjct: 233 SKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMR-PNAGTYT 291

Query: 366 CVFEAFAREEKVDEGKELLEVIKSKGFTPDENAVRDHL-SKRGQVFSSVMNMLFNK 202
            +FE FA+E+KV+EG+E LE +K+KGFTPDE AVR+ L ++RGQVF S+M++LF K
Sbjct: 292 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 347


>ref|XP_002530313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530169|gb|EEF32080.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 328

 Score =  317 bits (813), Expect = 2e-84
 Identities = 164/245 (66%), Positives = 199/245 (81%), Gaps = 14/245 (5%)
 Frame = -1

Query: 894 RNTTKTITF-------------SDADDEDEKNNITKEMEKTKLPPPYDPFNKKPVIEEPN 754
           + TTKTIT              SD D ED KN   KE++KTKLPPPYDPFNKKPVIEEP+
Sbjct: 88  KETTKTITNTKVNFSLSDSDSDSDLDSEDSKN---KEIDKTKLPPPYDPFNKKPVIEEPD 144

Query: 753 DPKDLQEIFHKMRTEGLVNNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVI 574
           DP +LQ IFHKMR+EGL+N+A+KMFDALSKDGLTHEA+ELF  IK+KG+MPDVVA+TAVI
Sbjct: 145 DPNNLQLIFHKMRSEGLLNSAVKMFDALSKDGLTHEALELFSQIKNKGHMPDVVAYTAVI 204

Query: 573 EAYSNAGGHSKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNLKDAKKYVLDMMDKGI 394
           EAY+NAGG SKEA+K F+RML++GV PNAYTY+VLIKGLA DG L DA KYVL+MM KG+
Sbjct: 205 EAYANAGGQSKEALKAFMRMLAAGVAPNAYTYTVLIKGLAGDGKLADANKYVLEMMGKGM 264

Query: 393 KGPNVGTYTCVFEAFAREEKVDEGKELLEVIKSKGFTPDENAVRDHL-SKRGQVFSSVMN 217
           + PN GTY+ VFEA+A+ +KVDE K LL+ +K KGF P+E AVR+ L +KRGQVF +V+N
Sbjct: 265 R-PNAGTYSTVFEAYAKAQKVDEAKLLLQQMKGKGFVPEEKAVREVLNNKRGQVFRTVIN 323

Query: 216 MLFNK 202
           +LF+K
Sbjct: 324 ILFDK 328


>ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Vitis vinifera]
          Length = 307

 Score =  316 bits (809), Expect = 7e-84
 Identities = 163/236 (69%), Positives = 197/236 (83%), Gaps = 5/236 (2%)
 Frame = -1

Query: 894 RNTTKTITFSDADDEDEKNNITK----EMEKTKLPPPYDPFNKKPVIEEPNDPKDLQEIF 727
           R++TK I FS +D + +   + K    E++K+KLPPPYDPF+KK  IEEP DPKDLQ+IF
Sbjct: 75  RSSTK-INFSPSDSDSDSETMIKKTKHEIDKSKLPPPYDPFSKKLAIEEPKDPKDLQDIF 133

Query: 726 HKMRTEGLVNNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNAGGH 547
           HKMRTEGLV NA+KMFDALSKDGLTHEAMELF  IKD G+MPDVVAHTAVIEAY+NA G 
Sbjct: 134 HKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANA-GQ 192

Query: 546 SKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNLKDAKKYVLDMMDKGIKGPNVGTYT 367
           SKEAVKV++RML+SGV PNAYTYSVLIKGLA D  L +AKKYVL+MM KG++ PN GTYT
Sbjct: 193 SKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMR-PNAGTYT 251

Query: 366 CVFEAFAREEKVDEGKELLEVIKSKGFTPDENAVRDHL-SKRGQVFSSVMNMLFNK 202
            +FE FA+E+KV+EG+E LE +K+KGFTPDE AVR+ L ++RGQVF S+M++LF K
Sbjct: 252 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 307


>ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [Arabidopsis thaliana]
           gi|332003244|gb|AED90627.1| nucleobase:cation
           symporter-1, NCS1 family [Arabidopsis thaliana]
          Length = 363

 Score =  293 bits (749), Expect = 6e-77
 Identities = 153/240 (63%), Positives = 184/240 (76%), Gaps = 4/240 (1%)
 Frame = -1

Query: 909 SSRPRRNTTKTITFSDAD-DEDEKNNITKEMEKTKLPPP-YDPFNKKPVIEEPNDPKDLQ 736
           S   R NT    + SD D DE+ +  +T++ +K + PPP YDPF+KKP IEEP DPK+LQ
Sbjct: 126 SETKRVNTKVNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFSKKPAIEEPEDPKNLQ 185

Query: 735 EIFHKMRTEGLVNNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNA 556
           EIFHKMRTEG  N A+KMFDALSKDG THEA+ELF  IKDK  MPDVVAHTA++EAY+NA
Sbjct: 186 EIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANA 245

Query: 555 GGHSKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNL-KDAKKYVLDMMDKGIKGPNV 379
            G +KE +KVF+RML+SGV PNAYTYSVLIKGLA DG   KDAKKY+L+MM  G+  PN 
Sbjct: 246 -GQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGM-SPNA 303

Query: 378 GTYTCVFEAFAREEKVDEGKELLEVIKSKGFTPDENAVRDHLS-KRGQVFSSVMNMLFNK 202
            TYT VFEAF RE K +  +ELL+ +K KGF PDE AVR+ L  KRGQVF +V+N+LF+K
Sbjct: 304 ATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQVFRTVINLLFDK 363


>emb|CAB83319.1| putative protein [Arabidopsis thaliana]
          Length = 482

 Score =  293 bits (749), Expect = 6e-77
 Identities = 153/240 (63%), Positives = 184/240 (76%), Gaps = 4/240 (1%)
 Frame = -1

Query: 909 SSRPRRNTTKTITFSDAD-DEDEKNNITKEMEKTKLPPP-YDPFNKKPVIEEPNDPKDLQ 736
           S   R NT    + SD D DE+ +  +T++ +K + PPP YDPF+KKP IEEP DPK+LQ
Sbjct: 107 SETKRVNTKVNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFSKKPAIEEPEDPKNLQ 166

Query: 735 EIFHKMRTEGLVNNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNA 556
           EIFHKMRTEG  N A+KMFDALSKDG THEA+ELF  IKDK  MPDVVAHTA++EAY+NA
Sbjct: 167 EIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANA 226

Query: 555 GGHSKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNL-KDAKKYVLDMMDKGIKGPNV 379
            G +KE +KVF+RML+SGV PNAYTYSVLIKGLA DG   KDAKKY+L+MM  G+  PN 
Sbjct: 227 -GQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGM-SPNA 284

Query: 378 GTYTCVFEAFAREEKVDEGKELLEVIKSKGFTPDENAVRDHLS-KRGQVFSSVMNMLFNK 202
            TYT VFEAF RE K +  +ELL+ +K KGF PDE AVR+ L  KRGQVF +V+N+LF+K
Sbjct: 285 ATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQVFRTVINLLFDK 344