BLASTX nr result

ID: Coptis24_contig00013767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013767
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551082.1| PREDICTED: AP-2 complex subunit alpha-2-like...   193   5e-47
ref|XP_002527437.1| AP-2 complex subunit alpha, putative [Ricinu...   193   5e-47
ref|XP_002328183.1| predicted protein [Populus trichocarpa] gi|2...   190   4e-46
ref|XP_003540215.1| PREDICTED: AP-2 complex subunit alpha-2-like...   190   5e-46
ref|XP_002874085.1| hypothetical protein ARALYDRAFT_489126 [Arab...   189   1e-45

>ref|XP_003551082.1| PREDICTED: AP-2 complex subunit alpha-2-like [Glycine max]
          Length = 1020

 Score =  193 bits (491), Expect = 5e-47
 Identities = 110/157 (70%), Positives = 117/157 (74%), Gaps = 8/157 (5%)
 Frame = +1

Query: 1    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 180
            LKLQEVVRGV+PL L EMANLFNSF LTV PGLDPNPNNLVASTTFYSESTRAMLCL R+
Sbjct: 886  LKLQEVVRGVRPLPLLEMANLFNSFHLTVCPGLDPNPNNLVASTTFYSESTRAMLCLARI 945

Query: 181  ETDPSDRTQLRMTVASGXXXXXXXXXXXXXXXXXXXXDPTLTFELKEFIKEQLVSIPLVS 360
            ETDP+DRTQLRMTVASG                    DPTLTFELKEFIK+QLVSIP  +
Sbjct: 946  ETDPADRTQLRMTVASG--------------------DPTLTFELKEFIKDQLVSIP--T 983

Query: 361  APTPLPSQVQPTSPPV--------ALTDPGAMLAGLL 447
            A T +P+Q  PTSPPV        ALTDPGAMLA LL
Sbjct: 984  AATHVPTQPAPTSPPVAQPGSAPTALTDPGAMLAALL 1020


>ref|XP_002527437.1| AP-2 complex subunit alpha, putative [Ricinus communis]
            gi|223533172|gb|EEF34929.1| AP-2 complex subunit alpha,
            putative [Ricinus communis]
          Length = 1018

 Score =  193 bits (491), Expect = 5e-47
 Identities = 104/150 (69%), Positives = 114/150 (76%), Gaps = 1/150 (0%)
 Frame = +1

Query: 1    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 180
            LKLQEVVRGV+PL L +MA+LFNSF++ +SPGLDPNPNNLVASTTFYSESTR MLCLVR+
Sbjct: 889  LKLQEVVRGVRPLPLADMASLFNSFRMMISPGLDPNPNNLVASTTFYSESTRQMLCLVRI 948

Query: 181  ETDPSDRTQLRMTVASGXXXXXXXXXXXXXXXXXXXXDPTLTFELKEFIKEQLVSIPLV- 357
            ETDP+DRTQLRMTVASG                    DPTLTFELKEFIKEQLVSIP   
Sbjct: 949  ETDPADRTQLRMTVASG--------------------DPTLTFELKEFIKEQLVSIPTAP 988

Query: 358  SAPTPLPSQVQPTSPPVALTDPGAMLAGLL 447
              PTP P   QP +P  ALTDPGA+LAGLL
Sbjct: 989  RGPTPAPPVAQPPNPVTALTDPGAVLAGLL 1018


>ref|XP_002328183.1| predicted protein [Populus trichocarpa] gi|222837698|gb|EEE76063.1|
            predicted protein [Populus trichocarpa]
          Length = 1014

 Score =  190 bits (483), Expect = 4e-46
 Identities = 106/150 (70%), Positives = 112/150 (74%), Gaps = 1/150 (0%)
 Frame = +1

Query: 1    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 180
            LKLQEVVRGV+PL L EM NLFNS +LTV PGLDPNPNNLVASTTFYSESTR MLCL+R+
Sbjct: 886  LKLQEVVRGVRPLPLIEMTNLFNSLRLTVCPGLDPNPNNLVASTTFYSESTRPMLCLIRI 945

Query: 181  ETDPSDRTQLRMTVASGXXXXXXXXXXXXXXXXXXXXDPTLTFELKEFIKEQLVSIPLVS 360
            ETDP+D TQLRMTVASG                    DPTLTFELKEFIKEQLVSIP  S
Sbjct: 946  ETDPADLTQLRMTVASG--------------------DPTLTFELKEFIKEQLVSIPTAS 985

Query: 361  -APTPLPSQVQPTSPPVALTDPGAMLAGLL 447
              P P P   QPTS P ALTDPGA+LAGLL
Sbjct: 986  RPPAPAPPAAQPTS-PAALTDPGALLAGLL 1014


>ref|XP_003540215.1| PREDICTED: AP-2 complex subunit alpha-2-like [Glycine max]
          Length = 1018

 Score =  190 bits (482), Expect = 5e-46
 Identities = 106/157 (67%), Positives = 117/157 (74%), Gaps = 8/157 (5%)
 Frame = +1

Query: 1    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 180
            LKLQEVVRGV+PL L EMANLFNS+ LTV PGLDPNPNNLV STTFYSESTRAMLCLVR+
Sbjct: 884  LKLQEVVRGVRPLPLLEMANLFNSYHLTVCPGLDPNPNNLVVSTTFYSESTRAMLCLVRI 943

Query: 181  ETDPSDRTQLRMTVASGXXXXXXXXXXXXXXXXXXXXDPTLTFELKEFIKEQLVSIPLVS 360
            ETDP+DRTQLRMTVASG                    DPTLTFE+KEFIK+QLVSIP ++
Sbjct: 944  ETDPADRTQLRMTVASG--------------------DPTLTFEMKEFIKDQLVSIPAIA 983

Query: 361  APTPLPSQVQPTSPPV--------ALTDPGAMLAGLL 447
              T +P+Q  PTSPP+        ALTDPGAMLA LL
Sbjct: 984  --TRVPTQPAPTSPPLAQPGSAPAALTDPGAMLAALL 1018


>ref|XP_002874085.1| hypothetical protein ARALYDRAFT_489126 [Arabidopsis lyrata subsp.
            lyrata] gi|297319922|gb|EFH50344.1| hypothetical protein
            ARALYDRAFT_489126 [Arabidopsis lyrata subsp. lyrata]
          Length = 1016

 Score =  189 bits (479), Expect = 1e-45
 Identities = 102/158 (64%), Positives = 113/158 (71%), Gaps = 9/158 (5%)
 Frame = +1

Query: 1    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 180
            LKLQEVVRGV+PL+LPEMANLFNSF +T+ PGLDPNPNNLVASTTFYSEST A+LCL R+
Sbjct: 879  LKLQEVVRGVRPLALPEMANLFNSFHVTICPGLDPNPNNLVASTTFYSESTGAILCLARI 938

Query: 181  ETDPSDRTQLRMTVASGXXXXXXXXXXXXXXXXXXXXDPTLTFELKEFIKEQLVSIPL-- 354
            ETDP+DRTQLRMTV SG                    DPTLTFELKEFIKEQL++IP+  
Sbjct: 939  ETDPADRTQLRMTVGSG--------------------DPTLTFELKEFIKEQLITIPMGS 978

Query: 355  -------VSAPTPLPSQVQPTSPPVALTDPGAMLAGLL 447
                    SAP+P P   QP SP     DPGAMLAGLL
Sbjct: 979  RALVPAAGSAPSPAPPVAQPPSPAALADDPGAMLAGLL 1016


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