BLASTX nr result

ID: Coptis24_contig00013762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013762
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29642.3| unnamed protein product [Vitis vinifera]              336   8e-90
ref|XP_002268804.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   336   8e-90
ref|XP_002527853.1| short-chain dehydrogenase, putative [Ricinus...   334   2e-89
ref|XP_004149129.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   332   9e-89
ref|XP_002892558.1| hypothetical protein ARALYDRAFT_471142 [Arab...   324   2e-86

>emb|CBI29642.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  336 bits (861), Expect = 8e-90
 Identities = 165/240 (68%), Positives = 199/240 (82%), Gaps = 15/240 (6%)
 Frame = -3

Query: 853 RTILITGVSKGLGRALALELSSRGHTVIGCSRSKDKLDALRPSLQN-------------- 716
           RT+LITGV KGLGRALALE++ RGHTV+GCSRS+D+L +L+  L +              
Sbjct: 70  RTVLITGVGKGLGRALALEIAKRGHTVVGCSRSQDRLTSLQSELSSVASSPQSDSAVSSS 129

Query: 715 -NHLLMEVDVRSDTSVADLARTVMEARGGVPPDIIVNNAGTINRNNKIWEVPPEELDAVL 539
             H  M VDVRS++SV +LAR VME +G   PDIIVNNAGTINRNN+IWEVP EE D V+
Sbjct: 130 DRHFFMTVDVRSNSSVEELARAVMEKKG--VPDIIVNNAGTINRNNRIWEVPEEEFDTVI 187

Query: 538 DTNIKGTANVLRHFLPHMVQRKQGIVVNMSSGWGRSAAAQVAPYCASKWAIEGLTKSVAK 359
           DTN+KGTANV+R F+P M++ KQGI+VNMSSGWGRSAAAQVAPYCASKWA+EGL++SVAK
Sbjct: 188 DTNVKGTANVMRQFIPLMIENKQGIIVNMSSGWGRSAAAQVAPYCASKWAVEGLSRSVAK 247

Query: 358 ELPEGMAIVALSPGVVNTDMLVSCFGASASVYQSPDAWAPKAAAMILNLTMLDNGASLTV 179
           ELP G+AIVAL+PGV+NTDML+SCFG SA++YQ+P++WAPKAA+MILNLT  DNGASLTV
Sbjct: 248 ELPSGLAIVALNPGVINTDMLMSCFGGSAALYQTPESWAPKAASMILNLTAADNGASLTV 307


>ref|XP_002268804.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like
           [Vitis vinifera]
          Length = 264

 Score =  336 bits (861), Expect = 8e-90
 Identities = 165/240 (68%), Positives = 199/240 (82%), Gaps = 15/240 (6%)
 Frame = -3

Query: 853 RTILITGVSKGLGRALALELSSRGHTVIGCSRSKDKLDALRPSLQN-------------- 716
           RT+LITGV KGLGRALALE++ RGHTV+GCSRS+D+L +L+  L +              
Sbjct: 27  RTVLITGVGKGLGRALALEIAKRGHTVVGCSRSQDRLTSLQSELSSVASSPQSDSAVSSS 86

Query: 715 -NHLLMEVDVRSDTSVADLARTVMEARGGVPPDIIVNNAGTINRNNKIWEVPPEELDAVL 539
             H  M VDVRS++SV +LAR VME +G   PDIIVNNAGTINRNN+IWEVP EE D V+
Sbjct: 87  DRHFFMTVDVRSNSSVEELARAVMEKKG--VPDIIVNNAGTINRNNRIWEVPEEEFDTVI 144

Query: 538 DTNIKGTANVLRHFLPHMVQRKQGIVVNMSSGWGRSAAAQVAPYCASKWAIEGLTKSVAK 359
           DTN+KGTANV+R F+P M++ KQGI+VNMSSGWGRSAAAQVAPYCASKWA+EGL++SVAK
Sbjct: 145 DTNVKGTANVMRQFIPLMIENKQGIIVNMSSGWGRSAAAQVAPYCASKWAVEGLSRSVAK 204

Query: 358 ELPEGMAIVALSPGVVNTDMLVSCFGASASVYQSPDAWAPKAAAMILNLTMLDNGASLTV 179
           ELP G+AIVAL+PGV+NTDML+SCFG SA++YQ+P++WAPKAA+MILNLT  DNGASLTV
Sbjct: 205 ELPSGLAIVALNPGVINTDMLMSCFGGSAALYQTPESWAPKAASMILNLTAADNGASLTV 264


>ref|XP_002527853.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223532777|gb|EEF34556.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 252

 Score =  334 bits (857), Expect = 2e-89
 Identities = 167/248 (67%), Positives = 206/248 (83%), Gaps = 6/248 (2%)
 Frame = -3

Query: 904 GLKSQSLSAEMNKGPVV--RTILITGVSKGLGRALALELSSRGHTVIGCSRSKDKLDALR 731
           G+K+ + +A M  GP    + ++ITGVSKGLGRALALEL+ RGHTVIGCSR++DKL++L+
Sbjct: 7   GVKAAAAAAVMTGGPNAGGKKVMITGVSKGLGRALALELAKRGHTVIGCSRAQDKLNSLQ 66

Query: 730 PSL----QNNHLLMEVDVRSDTSVADLARTVMEARGGVPPDIIVNNAGTINRNNKIWEVP 563
             L     N+HLL+  DV S++SV +LA+ +ME +G   PDIIVNNAGTIN+NNKIWEVP
Sbjct: 67  SELPSDHNNHHLLLNADVSSNSSVEELAKAIMEKKG--VPDIIVNNAGTINKNNKIWEVP 124

Query: 562 PEELDAVLDTNIKGTANVLRHFLPHMVQRKQGIVVNMSSGWGRSAAAQVAPYCASKWAIE 383
            EE D V+DTN+KG ANVLRHF+P M+  KQGI+VNMSSGWGRS AA VAPYCASKWA+E
Sbjct: 125 VEEFDTVIDTNVKGIANVLRHFIPLMLPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVE 184

Query: 382 GLTKSVAKELPEGMAIVALSPGVVNTDMLVSCFGASASVYQSPDAWAPKAAAMILNLTML 203
           G+++SVAKELP+GMA+VAL+PGV++T+ML SCFG SAS+YQ+PDAWA KAA MILNLT  
Sbjct: 185 GMSRSVAKELPDGMAVVALNPGVIHTEMLQSCFGTSASLYQAPDAWALKAATMILNLTGA 244

Query: 202 DNGASLTV 179
           DNGASLTV
Sbjct: 245 DNGASLTV 252


>ref|XP_004149129.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like
           [Cucumis sativus] gi|449494615|ref|XP_004159598.1|
           PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase
           FabG-like [Cucumis sativus]
          Length = 247

 Score =  332 bits (852), Expect = 9e-89
 Identities = 165/232 (71%), Positives = 194/232 (83%), Gaps = 7/232 (3%)
 Frame = -3

Query: 853 RTILITGVSKGLGRALALELSSRGHTVIGCSRSKDKLDALRP-------SLQNNHLLMEV 695
           +T+LITGVSKGLGRALALEL+ RGH+VIGCSRS+DKL++L         S   NHLL+  
Sbjct: 18  KTVLITGVSKGLGRALALELAKRGHSVIGCSRSQDKLNSLNSDFISLDLSSSANHLLLPA 77

Query: 694 DVRSDTSVADLARTVMEARGGVPPDIIVNNAGTINRNNKIWEVPPEELDAVLDTNIKGTA 515
           DV SD++V + AR V+E +G   PDIIVNNAGTIN+N+K+WEVPPEE DAV +TN+KGT 
Sbjct: 78  DVSSDSNVQEFARVVVERKG--VPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTV 135

Query: 514 NVLRHFLPHMVQRKQGIVVNMSSGWGRSAAAQVAPYCASKWAIEGLTKSVAKELPEGMAI 335
           N+LRHF+P M+  K+GI+VNMSSGWGRS AA VAPYCASKWAIEGLT+SVAKELPEGM I
Sbjct: 136 NILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGI 195

Query: 334 VALSPGVVNTDMLVSCFGASASVYQSPDAWAPKAAAMILNLTMLDNGASLTV 179
           VAL+PGV+NTDML SCFG SAS+YQ+PD+WA KAA MILNLT  DNGASLTV
Sbjct: 196 VALNPGVINTDMLASCFGDSASLYQTPDSWASKAATMILNLTAADNGASLTV 247


>ref|XP_002892558.1| hypothetical protein ARALYDRAFT_471142 [Arabidopsis lyrata subsp.
           lyrata] gi|297338400|gb|EFH68817.1| hypothetical protein
           ARALYDRAFT_471142 [Arabidopsis lyrata subsp. lyrata]
          Length = 240

 Score =  324 bits (831), Expect = 2e-86
 Identities = 162/237 (68%), Positives = 197/237 (83%), Gaps = 2/237 (0%)
 Frame = -3

Query: 883 SAEMNKGPVVRTILITGVSKGLGRALALELSSRGHTVIGCSRSKDKLDALRPSLQN--NH 710
           S   N     RT+LITGVSKGLGRALALEL+ RGHTVIGC+R+++KL AL+  L +  NH
Sbjct: 6   SGAANSVVAARTVLITGVSKGLGRALALELAKRGHTVIGCARTQEKLTALQSELSSPTNH 65

Query: 709 LLMEVDVRSDTSVADLARTVMEARGGVPPDIIVNNAGTINRNNKIWEVPPEELDAVLDTN 530
           LL+  DV+S++SV +LA T++E +G   PDIIVNNAGTIN+N+KIWEV  E+ D V+DTN
Sbjct: 66  LLLTADVKSNSSVEELAHTIVEKKG--VPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTN 123

Query: 529 IKGTANVLRHFLPHMVQRKQGIVVNMSSGWGRSAAAQVAPYCASKWAIEGLTKSVAKELP 350
           +KG ANVLRHF+P M+ RKQGI+VNMSSGWGRS AA VAPYCASKWAIEGL+++VAKE+ 
Sbjct: 124 VKGVANVLRHFIPLMLPRKQGIIVNMSSGWGRSGAALVAPYCASKWAIEGLSRAVAKEVV 183

Query: 349 EGMAIVALSPGVVNTDMLVSCFGASASVYQSPDAWAPKAAAMILNLTMLDNGASLTV 179
           EGMA+VAL+PGV+NT++L SCFG SAS+YQ+PDAWA KAA MILNLT  DNG SLTV
Sbjct: 184 EGMAVVALNPGVINTELLTSCFGNSASLYQAPDAWAVKAATMILNLTAGDNGGSLTV 240


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