BLASTX nr result
ID: Coptis24_contig00013760
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013760
(1553 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi... 563 e-158
ref|XP_002303023.1| predicted protein [Populus trichocarpa] gi|2... 544 e-152
ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat... 535 e-149
ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat... 535 e-149
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi... 530 e-148
>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 563 bits (1450), Expect = e-158
Identities = 293/511 (57%), Positives = 355/511 (69%)
Frame = +3
Query: 21 DGIREFSQMMSCWIKPDAYVLALVLKACGSELALKEGKVVHSLVLKLELGLNRSVRMKLM 200
+G+ FS+M PD + L VL+ C AL G+ VH V K N V L
Sbjct: 167 EGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLA 226
Query: 201 EFYGKCGEFGDARRLFGGMPKGDVAASTVMICCFCYHGFVEDAFEVFDSTHFKDTVCWTA 380
Y KCG G+ RL MP +V A W
Sbjct: 227 HMYMKCGSLGEGERLIRAMPSQNVVA-------------------------------WNT 255
Query: 381 MIDGLVRNEEMNKALELFRKMQMENVRPNEVTVVCVLSACSQLGALELGRWVHSYVGKYK 560
+I G +N + L+ + M+M RP+++T V V+S+CS+L L G+ +H+ V K
Sbjct: 256 LIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAG 315
Query: 561 IKLNHFVGNALISMYSKCGSLEDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLF 740
L V ++LISMYS+CG LE SLKVFLE E+ D V WSSMIAAYGFHG G EAI LF
Sbjct: 316 ASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDV-VCWSSMIAAYGFHGRGVEAIDLF 374
Query: 741 EQMEKKGIEPNDVTFLSLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCMVDLLGR 920
QME++ +E NDVTFLSLLYACSH GLKE+G + F LMV++Y +KPRLEHY CMVDLLGR
Sbjct: 375 NQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGR 434
Query: 921 AGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVPYVLL 1100
G ++EAEALI+SMP+K D I WKTLLSACKIHK TEMARR++E V RLDP+D VPYVLL
Sbjct: 435 YGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLL 494
Query: 1101 SNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHLKWLEIDEYL 1280
SNIHAS K W DVS++RK MRD+ +KKEPGISWLEVKNQ+HQF +GDKSH K +EI YL
Sbjct: 495 SNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYL 554
Query: 1281 KELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRVMKNM 1460
+ELTSEM+KRGYVPD +SVLHDMD+E+KEY L HHSEKLAIAFALL T G PIRV+KN+
Sbjct: 555 RELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNL 614
Query: 1461 RVCNDCHLAIKFISEITNREIVVRDASRFHH 1553
RVC+DCH+AIK+ISEI+NREI+VRD+SRFHH
Sbjct: 615 RVCSDCHVAIKYISEISNREIIVRDSSRFHH 645
Score = 142 bits (359), Expect = 2e-31
Identities = 86/321 (26%), Positives = 162/321 (50%)
Frame = +3
Query: 57 WIKPDAYVLALVLKACGSELALKEGKVVHSLVLKLELGLNRSVRMKLMEFYGKCGEFGDA 236
W +P + + +L++C SE +L GK +HSL++ ++ + L+ Y KCG+ A
Sbjct: 49 WSEPSLF--SHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTA 106
Query: 237 RRLFGGMPKGDVAASTVMICCFCYHGFVEDAFEVFDSTHFKDTVCWTAMIDGLVRNEEMN 416
LFG MP+ ++ + ++I + G A ++FD ++ W AM+ GL++ E
Sbjct: 107 ITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNE 166
Query: 417 KALELFRKMQMENVRPNEVTVVCVLSACSQLGALELGRWVHSYVGKYKIKLNHFVGNALI 596
+ L LF +M P+E + VL C+ L AL GR VH YV K + N V ++L
Sbjct: 167 EGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLA 226
Query: 597 SMYSKCGSLEDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPND 776
MY KCGSL + ++ + + V W+++IA +G+ +E + + M+ G P+
Sbjct: 227 HMYMKCGSLGEGERL-IRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDK 285
Query: 777 VTFLSLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCMVDLLGRAGCLDEAEALIK 956
+TF+S++ +CS +G ++ ++ + + + ++ + R GCL+ + +
Sbjct: 286 ITFVSVISSCSELATLGQGQQIHAEVI-KAGASLIVSVISSLISMYSRCGCLEYSLKVFL 344
Query: 957 SMPIKPDSIIWKTLLSACKIH 1019
D + W ++++A H
Sbjct: 345 ECE-NGDVVCWSSMIAAYGFH 364
>ref|XP_002303023.1| predicted protein [Populus trichocarpa] gi|222844749|gb|EEE82296.1|
predicted protein [Populus trichocarpa]
Length = 621
Score = 544 bits (1402), Expect = e-152
Identities = 273/517 (52%), Positives = 366/517 (70%)
Frame = +3
Query: 3 LSDLYVDGIREFSQMMSCWIKPDAYVLALVLKACGSELALKEGKVVHSLVLKLELGLNRS 182
LS Y DGI + QM++ + PD+Y + VLKACG LALKEG+ VHS VLKL L NRS
Sbjct: 107 LSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRS 166
Query: 183 VRMKLMEFYGKCGEFGDARRLFGGMPKGDVAASTVMICCFCYHGFVEDAFEVFDSTHFKD 362
+R+KL+E YGKCG F DARR+F MP+ DV ASTVMI + HG KD
Sbjct: 167 IRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGI-------------KD 213
Query: 363 TVCWTAMIDGLVRNEEMNKALELFRKMQMENVRPNEVTVVCVLSACSQLGALELGRWVHS 542
TVCWTAMIDGLVRN E N+ALE+FR MQ E+V PNEVT+VCVLSACS+LGAL+LGRWV S
Sbjct: 214 TVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRS 273
Query: 543 YVGKYKIKLNHFVGNALISMYSKCGSLEDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQ 722
Y+ K++I+LNHFVG ALI+MYS+CG ++++ +VF E + + + ++SMI + HG
Sbjct: 274 YMDKHRIELNHFVGGALINMYSRCGDIDEAQRVF-EQMKEKNVITYNSMIMGFALHGKSV 332
Query: 723 EAIKLFEQMEKKGIEPNDVTFLSLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCM 902
EA++LF + K+G P+ VTF+ +L ACSH GL E G E+F M +Y ++P++EHY CM
Sbjct: 333 EAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCM 392
Query: 903 VDLLGRAGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDA 1082
VDLLGR G L+EA + I+ M + PD ++ LLSACKIH N E+A RVA++++ D+
Sbjct: 393 VDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADS 452
Query: 1083 VPYVLLSNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHLKWL 1262
Y+LLSN ++S+ W + +E+R MR++ ++KEPG S +EV N++H+F +GD H +
Sbjct: 453 GTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKE 512
Query: 1263 EIDEYLKELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPI 1442
+I + L+EL +R GY P T VLHD++ EKE+ LA HSE+LAI + L+ST +
Sbjct: 513 KIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTL 572
Query: 1443 RVMKNMRVCNDCHLAIKFISEITNREIVVRDASRFHH 1553
RV+KN+RVCNDCHL IK IS IT R+IVVRD +RFHH
Sbjct: 573 RVVKNLRVCNDCHLTIKLISNITRRKIVVRDRNRFHH 609
Score = 110 bits (274), Expect = 1e-21
Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 19/250 (7%)
Frame = +3
Query: 327 AFEVFDSTHFKDTVCWTAMIDGLVRNEEMNKALELFRKMQMENVRPNEVTVVCVLSACSQ 506
A ++F T + +TA+IDGLV + + L+ +M ++ P+ V VL AC
Sbjct: 83 ASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGC 142
Query: 507 LGALELGRWVHSYVGKYKIKLNHFVGNALISMYSKCGSLEDSLKVFLE-PEDD------- 662
AL+ GR VHS V K + N + LI +Y KCG+ ED+ +VF E PE D
Sbjct: 143 HLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVM 202
Query: 663 ---------DDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYACSHR 815
D V W++MI +G A+++F M+++ + PN+VT + +L ACS
Sbjct: 203 INYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSEL 262
Query: 816 GLKERGTELFRLMVDEYKLKPRLEHY--NCMVDLLGRAGCLDEAEALIKSMPIKPDSIIW 989
G + G R +D+++++ L H+ ++++ R G +DEA+ + + M K + I +
Sbjct: 263 GALQLG-RWVRSYMDKHRIE--LNHFVGGALINMYSRCGDIDEAQRVFEQMKEK-NVITY 318
Query: 990 KTLLSACKIH 1019
+++ +H
Sbjct: 319 NSMIMGFALH 328
>ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 535 bits (1379), Expect = e-149
Identities = 273/513 (53%), Positives = 371/513 (72%)
Frame = +3
Query: 15 YVDGIREFSQMMSCWIKPDAYVLALVLKACGSELALKEGKVVHSLVLKLELGLNRSVRMK 194
Y D I+ +S+M+ I PD Y++A +LKACGS+LAL+EG+ VHS LKL L NR VR++
Sbjct: 128 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 187
Query: 195 LMEFYGKCGEFGDARRLFGGMPKGDVAASTVMICCFCYHGFVEDAFEVFDSTHFKDTVCW 374
+ME YGKCGE GDARR+F MP+ DV ASTVMI + G VE+A VF KDTVCW
Sbjct: 188 IMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCW 246
Query: 375 TAMIDGLVRNEEMNKALELFRKMQMENVRPNEVTVVCVLSACSQLGALELGRWVHSYVGK 554
TAMIDG VRNEEMN+ALE FR MQ ENVRPNE T+VCVLSACSQLGALE+GRWVHSY+ K
Sbjct: 247 TAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 306
Query: 555 YKIKLNHFVGNALISMYSKCGSLEDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIK 734
++I+LN FVGNALI+MYS+CGS++++ VF E +D D + +++MI+ +G ++AI+
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDV-ITYNTMISGLSMNGKSRQAIE 365
Query: 735 LFEQMEKKGIEPNDVTFLSLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCMVDLL 914
LF M + + P +VTF+ +L ACSH GL + G ++F M +Y ++P++EHY CMVDLL
Sbjct: 366 LFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLL 425
Query: 915 GRAGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVPYV 1094
GR G L+EA LI++M + PD I+ TLLSACK+HKN E+ +VA+ + D+ YV
Sbjct: 426 GRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYV 485
Query: 1095 LLSNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHLKWLEIDE 1274
LLS+++AS+ W + +++R M++ ++KEPG S +EV N++H+F +GD H + I E
Sbjct: 486 LLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYE 545
Query: 1275 YLKELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRVMK 1454
L+EL +R GY P+ VL D++ EKE+ LA HSE+LAI + L+ST IRVMK
Sbjct: 546 KLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMK 605
Query: 1455 NMRVCNDCHLAIKFISEITNREIVVRDASRFHH 1553
N+RVC DCH AIK I++IT R++VVRD +RFH+
Sbjct: 606 NLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHY 638
Score = 106 bits (265), Expect = 1e-20
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Frame = +3
Query: 294 CCFCYHGFVEDAFEVFDSTHFKDTVCWTAMIDGLVRNEEMNKALELFRKMQMENVRPNEV 473
C C+ ++ A +F TH + +TA+IDG V + A++L+ +M +++ P+
Sbjct: 91 CSKCHA--IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNY 148
Query: 474 TVVCVLSACSQLGALELGRWVHSYVGKYKIKLNHFVGNALISMYSKCGSLEDSLKVFLE- 650
+ +L AC AL GR VHS K + N V ++ +Y KCG L D+ +VF E
Sbjct: 149 LMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEM 208
Query: 651 PED----------------------------DDDDVLWSSMIAAYGFHGHGQEAIKLFEQ 746
PED D V W++MI + + A++ F
Sbjct: 209 PEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRG 268
Query: 747 MEKKGIEPNDVTFLSLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCMVDLLGRAG 926
M+ + + PN+ T + +L ACS G E G + M +++++ L N ++++ R G
Sbjct: 269 MQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYM-RKFEIELNLFVGNALINMYSRCG 327
Query: 927 CLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMA 1037
+DEA+ + M + D I + T++S ++ + A
Sbjct: 328 SIDEAQTVFDEMKDR-DVITYNTMISGLSMNGKSRQA 363
>ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 535 bits (1379), Expect = e-149
Identities = 272/513 (53%), Positives = 371/513 (72%)
Frame = +3
Query: 15 YVDGIREFSQMMSCWIKPDAYVLALVLKACGSELALKEGKVVHSLVLKLELGLNRSVRMK 194
Y++ I+ +S+M+ I PD Y++A +LKACGS+LAL+EG+ VHS LKL NR VR++
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 187
Query: 195 LMEFYGKCGEFGDARRLFGGMPKGDVAASTVMICCFCYHGFVEDAFEVFDSTHFKDTVCW 374
+ME YGKCGE GDARR+F MP+ DV ASTVMI + G VE+A VF KDTVCW
Sbjct: 188 IMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCW 246
Query: 375 TAMIDGLVRNEEMNKALELFRKMQMENVRPNEVTVVCVLSACSQLGALELGRWVHSYVGK 554
TAMIDG VRNEE N+ALE FR MQ ENVRPNE T+VCVLSACSQLGALE+GRWVHSY+ K
Sbjct: 247 TAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 306
Query: 555 YKIKLNHFVGNALISMYSKCGSLEDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIK 734
++I+LN FVGNALI+MYS+CGS++++ VF E +D D + +++MI+ +G ++AI+
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDV-ITYNTMISGLSMNGKSRQAIE 365
Query: 735 LFEQMEKKGIEPNDVTFLSLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCMVDLL 914
LF M + + P +VTF+ +L ACSH GL + G E+F M +Y+++P++EHY CMVDLL
Sbjct: 366 LFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLL 425
Query: 915 GRAGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVPYV 1094
GR G L+EA LI++M + PD I+ TLLSACK+HKN E+ +VA+ + D+ YV
Sbjct: 426 GRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYV 485
Query: 1095 LLSNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHLKWLEIDE 1274
LLS+++AS+ W + +++R M++ ++KEPG S +EV N++H+F +GD H + I E
Sbjct: 486 LLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYE 545
Query: 1275 YLKELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRVMK 1454
L+EL +R GY P+ VL D++ EKE+ LA HSE+LAI + L+ST IRVMK
Sbjct: 546 KLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMK 605
Query: 1455 NMRVCNDCHLAIKFISEITNREIVVRDASRFHH 1553
N+RVC DCH AIK I++IT R+IVVRD +RFH+
Sbjct: 606 NLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHY 638
Score = 108 bits (269), Expect = 5e-21
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Frame = +3
Query: 294 CCFCYHGFVEDAFEVFDSTHFKDTVCWTAMIDGLVRNEEMNKALELFRKMQMENVRPNEV 473
C C+ ++ A +F TH + +TA+IDG V + +A++L+ +M E++ P+
Sbjct: 91 CSKCHA--IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNY 148
Query: 474 TVVCVLSACSQLGALELGRWVHSYVGKYKIKLNHFVGNALISMYSKCGSLEDSLKVFLE- 650
+ +L AC AL GR VHS K N V ++ +Y KCG L D+ +VF E
Sbjct: 149 LMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEM 208
Query: 651 PED----------------------------DDDDVLWSSMIAAYGFHGHGQEAIKLFEQ 746
PED D V W++MI + + A++ F
Sbjct: 209 PEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRG 268
Query: 747 MEKKGIEPNDVTFLSLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCMVDLLGRAG 926
M+ + + PN+ T + +L ACS G E G + M +++++ L N ++++ R G
Sbjct: 269 MQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYM-RKFEIELNLFVGNALINMYSRCG 327
Query: 927 CLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMA 1037
+DEA+ + M + D I + T++S ++ + A
Sbjct: 328 SIDEAQTVFDEMKDR-DVITYNTMISGLSMNGKSRQA 363
>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080-like
[Cucumis sativus] gi|449526872|ref|XP_004170437.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 530 bits (1364), Expect = e-148
Identities = 272/506 (53%), Positives = 344/506 (67%)
Frame = +3
Query: 36 FSQMMSCWIKPDAYVLALVLKACGSELALKEGKVVHSLVLKLELGLNRSVRMKLMEFYGK 215
F +M PD + L VL+ C +L G+ VH+ +LK L+ V L Y K
Sbjct: 182 FKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK 241
Query: 216 CGEFGDARRLFGGMPKGDVAASTVMICCFCYHGFVEDAFEVFDSTHFKDTVCWTAMIDGL 395
G D +L MP + V W +I G
Sbjct: 242 SGSLSDGEKLIKSMP-------------------------------IRTVVAWNTLIAGK 270
Query: 396 VRNEEMNKALELFRKMQMENVRPNEVTVVCVLSACSQLGALELGRWVHSYVGKYKIKLNH 575
+N + L + M+M RP+++T V VLSACS+L L G+ +H+ V K
Sbjct: 271 AQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVL 330
Query: 576 FVGNALISMYSKCGSLEDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEK 755
V ++LISMYS+ G LEDS+K F++ E+ D VLWSSMIAAYGFHG G+EA++LF QME
Sbjct: 331 AVVSSLISMYSRSGCLEDSIKAFVDRENFDV-VLWSSMIAAYGFHGRGEEALELFHQMED 389
Query: 756 KGIEPNDVTFLSLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCMVDLLGRAGCLD 935
+E N+VTFLSLLYACSH GLKE+GTE F LMV +YKLKPR+EHY C+VDLLGRAG L+
Sbjct: 390 LKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLE 449
Query: 936 EAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVPYVLLSNIHA 1115
EAE +I+SMP++PD IIWKTLL+ACK+HK EMA R++E +++LDP DA YVLLSNIHA
Sbjct: 450 EAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHA 509
Query: 1116 STKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHLKWLEIDEYLKELTS 1295
S + W +VS++RK MRD++V+KEPGISWLE+KN VHQF +GDKSH ++ EID YLKEL S
Sbjct: 510 SARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMS 569
Query: 1296 EMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRVMKNMRVCND 1475
E+++ GYVP+ SVLHDMD EEKEY+LAHHSEK AIAFAL++T+ PIRVMKN+RVC+D
Sbjct: 570 ELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDD 629
Query: 1476 CHLAIKFISEITNREIVVRDASRFHH 1553
CH AIK IS I NREI+VRDASRFHH
Sbjct: 630 CHNAIKCISRIRNREIIVRDASRFHH 655
Score = 140 bits (354), Expect = 7e-31
Identities = 93/325 (28%), Positives = 170/325 (52%), Gaps = 2/325 (0%)
Frame = +3
Query: 69 DAYVLALVLKACGSELALKEGKVVHSLVLKLELGLNRSVRMKLMEFYGKCGEFGDARRLF 248
D + + +L++C +L GK VHSL++ ++ + L+ FY K G+F + LF
Sbjct: 61 DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120
Query: 249 GGMPKGDVAASTVMICCFCYHGFVEDAFEVFDSTHFKDTVCWTAMIDGLVRNEEMNKALE 428
MP+ +V + ++I + G +E A ++FD ++ W AMI GL + E +AL
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALS 180
Query: 429 LFRKMQMENVRPNEVTVVCVLSACSQLGALELGRWVHSYVGKYKIKLNHFVGNALISMYS 608
LF++M P+E T+ VL C+ L +L G+ VH+ + K +L+ VG++L MY
Sbjct: 181 LFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYI 240
Query: 609 KCGSLEDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFL 788
K GSL D K+ ++ V W+++IA +G +E + + M+ G P+ +TF+
Sbjct: 241 KSGSLSDGEKL-IKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFV 299
Query: 789 SLLYACSHRGLKERGTELFRLMVDEYKLKPRLEHYNCMVDLLGRAGCLDEAEALIKSMPI 968
S+L ACS +G ++ ++ + L + ++ + R+GCL+++ IK+
Sbjct: 300 SVLSACSELATLGQGQQIHAEVI-KAGASSVLAVVSSLISMYSRSGCLEDS---IKAFVD 355
Query: 969 KP--DSIIWKTLLSACKIHKNTEMA 1037
+ D ++W ++++A H E A
Sbjct: 356 RENFDVVLWSSMIAAYGFHGRGEEA 380