BLASTX nr result

ID: Coptis24_contig00013725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013725
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172314.1| PREDICTED: putative clathrin assembly protei...   125   1e-52
ref|XP_004136352.1| PREDICTED: putative clathrin assembly protei...   125   1e-52
ref|XP_002285168.1| PREDICTED: putative clathrin assembly protei...   122   6e-52
emb|CBI21050.3| unnamed protein product [Vitis vinifera]              122   6e-52
ref|XP_002515505.1| clathrin assembly protein, putative [Ricinus...   123   2e-51

>ref|XP_004172314.1| PREDICTED: putative clathrin assembly protein At2g25430-like
           [Cucumis sativus]
          Length = 653

 Score =  125 bits (314), Expect(2) = 1e-52
 Identities = 63/77 (81%), Positives = 71/77 (92%)
 Frame = -2

Query: 473 MSSSTMRKAIGAVKDQTSIGIAKVASNTAPDLEVAIVKAMTHDDDPTDEKYIREILTLTS 294
           M+ ST+RKA+GA+KDQTSIGIAKVASN APDLEVAIVKA +HDDDP  EKYIREIL+LTS
Sbjct: 1   MAPSTIRKAVGALKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILSLTS 60

Query: 293 YSRMYVNACVAAISKRL 243
           YSR YV+ACV+AISKRL
Sbjct: 61  YSRGYVSACVSAISKRL 77



 Score =  106 bits (265), Expect(2) = 1e-52
 Identities = 47/56 (83%), Positives = 55/56 (98%)
 Frame = -1

Query: 168 RDWVVGLKALMLVHRLLSEGDPVFQQEILYATRKGTRLLNLSDFRDEAHSNSWDHS 1
           RDW+V LKAL+LVHRLL+EGDPVFQ+EILYATR+GTRLLN+SDF+DEAHS+SWDHS
Sbjct: 81  RDWIVALKALILVHRLLNEGDPVFQEEILYATRRGTRLLNMSDFKDEAHSSSWDHS 136


>ref|XP_004136352.1| PREDICTED: putative clathrin assembly protein At2g25430-like
           [Cucumis sativus]
          Length = 653

 Score =  125 bits (314), Expect(2) = 1e-52
 Identities = 63/77 (81%), Positives = 71/77 (92%)
 Frame = -2

Query: 473 MSSSTMRKAIGAVKDQTSIGIAKVASNTAPDLEVAIVKAMTHDDDPTDEKYIREILTLTS 294
           M+ ST+RKA+GA+KDQTSIGIAKVASN APDLEVAIVKA +HDDDP  EKYIREIL+LTS
Sbjct: 1   MAPSTIRKAVGALKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILSLTS 60

Query: 293 YSRMYVNACVAAISKRL 243
           YSR YV+ACV+AISKRL
Sbjct: 61  YSRGYVSACVSAISKRL 77



 Score =  106 bits (265), Expect(2) = 1e-52
 Identities = 47/56 (83%), Positives = 55/56 (98%)
 Frame = -1

Query: 168 RDWVVGLKALMLVHRLLSEGDPVFQQEILYATRKGTRLLNLSDFRDEAHSNSWDHS 1
           RDW+V LKAL+LVHRLL+EGDPVFQ+EILYATR+GTRLLN+SDF+DEAHS+SWDHS
Sbjct: 81  RDWIVALKALILVHRLLNEGDPVFQEEILYATRRGTRLLNMSDFKDEAHSSSWDHS 136


>ref|XP_002285168.1| PREDICTED: putative clathrin assembly protein At2g25430-like [Vitis
           vinifera]
          Length = 652

 Score =  122 bits (306), Expect(2) = 6e-52
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = -2

Query: 473 MSSSTMRKAIGAVKDQTSIGIAKVASNTAPDLEVAIVKAMTHDDDPTDEKYIREILTLTS 294
           M+ S++RKAIG+VKDQTSIGIAK+ASN APDLEVAIVKA +HDDDP  EKY++EIL LT 
Sbjct: 1   MAPSSIRKAIGSVKDQTSIGIAKIASNMAPDLEVAIVKATSHDDDPAAEKYVQEILNLTK 60

Query: 293 YSRMYVNACVAAISKRLG 240
           YS  YVNACVAA+SKRLG
Sbjct: 61  YSHGYVNACVAAVSKRLG 78



 Score =  107 bits (266), Expect(2) = 6e-52
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = -1

Query: 168 RDWVVGLKALMLVHRLLSEGDPVFQQEILYATRKGTRLLNLSDFRDEAHSNSWDHS 1
           RDWVV LKAL+LVHRLL+EGDP FQ+EILYATR+GTRLLN+SDFRDEAHSNSWDHS
Sbjct: 81  RDWVVALKALVLVHRLLAEGDPGFQREILYATRRGTRLLNMSDFRDEAHSNSWDHS 136


>emb|CBI21050.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score =  122 bits (306), Expect(2) = 6e-52
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = -2

Query: 473 MSSSTMRKAIGAVKDQTSIGIAKVASNTAPDLEVAIVKAMTHDDDPTDEKYIREILTLTS 294
           M+ S++RKAIG+VKDQTSIGIAK+ASN APDLEVAIVKA +HDDDP  EKY++EIL LT 
Sbjct: 1   MAPSSIRKAIGSVKDQTSIGIAKIASNMAPDLEVAIVKATSHDDDPAAEKYVQEILNLTK 60

Query: 293 YSRMYVNACVAAISKRLG 240
           YS  YVNACVAA+SKRLG
Sbjct: 61  YSHGYVNACVAAVSKRLG 78



 Score =  107 bits (266), Expect(2) = 6e-52
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = -1

Query: 168 RDWVVGLKALMLVHRLLSEGDPVFQQEILYATRKGTRLLNLSDFRDEAHSNSWDHS 1
           RDWVV LKAL+LVHRLL+EGDP FQ+EILYATR+GTRLLN+SDFRDEAHSNSWDHS
Sbjct: 81  RDWVVALKALVLVHRLLAEGDPGFQREILYATRRGTRLLNMSDFRDEAHSNSWDHS 136


>ref|XP_002515505.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223545449|gb|EEF46954.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 662

 Score =  123 bits (308), Expect(2) = 2e-51
 Identities = 62/78 (79%), Positives = 70/78 (89%)
 Frame = -2

Query: 473 MSSSTMRKAIGAVKDQTSIGIAKVASNTAPDLEVAIVKAMTHDDDPTDEKYIREILTLTS 294
           M+ ST+RKAIG VKDQTSIGIAKVASN AP+LEVAIVKA +HDDDP +EKYIREIL LTS
Sbjct: 1   MAPSTIRKAIGTVKDQTSIGIAKVASNMAPELEVAIVKATSHDDDPANEKYIREILNLTS 60

Query: 293 YSRMYVNACVAAISKRLG 240
            SR Y++ACVAA+SKRLG
Sbjct: 61  CSRGYIHACVAAVSKRLG 78



 Score =  104 bits (260), Expect(2) = 2e-51
 Identities = 46/56 (82%), Positives = 54/56 (96%)
 Frame = -1

Query: 168 RDWVVGLKALMLVHRLLSEGDPVFQQEILYATRKGTRLLNLSDFRDEAHSNSWDHS 1
           RDW+V LKALMLVHRLL+E DP+FQ+EILYATR+GTR+LN+SDFRDEAHS+SWDHS
Sbjct: 81  RDWIVALKALMLVHRLLNEADPLFQEEILYATRRGTRVLNMSDFRDEAHSSSWDHS 136


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