BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013722
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   198   4e-49
emb|CBI20856.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46...   178   3e-43
ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46...   176   1e-42

>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  198 bits (503), Expect = 4e-49
 Identities = 100/129 (77%), Positives = 110/129 (85%)
 Frame = -1

Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214
           LLP AINAA AALVDA IPLKHLAVAI C L ESG V+LDPTK+EEQKMKAFAYLVFPNS
Sbjct: 117 LLPCAINAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNS 176

Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34
             SI+PE S  +EGEL+EHG+ITSVTHGVMSVD YLHCLERG++AS KMS FLRRSLQS+
Sbjct: 177 AISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTKMSAFLRRSLQSQ 236

Query: 33  VPNDLPKTG 7
            PND  + G
Sbjct: 237 APNDSSRAG 245


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  198 bits (503), Expect = 4e-49
 Identities = 100/129 (77%), Positives = 110/129 (85%)
 Frame = -1

Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214
           LLP AINAA AALVDA IPLKHLAVAI C L ESG V+LDPTK+EEQKMKAFAYLVFPNS
Sbjct: 115 LLPCAINAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNS 174

Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34
             SI+PE S  +EGEL+EHG+ITSVTHGVMSVD YLHCLERG++AS KMS FLRRSLQS+
Sbjct: 175 AISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTKMSAFLRRSLQSQ 234

Query: 33  VPNDLPKTG 7
            PND  + G
Sbjct: 235 APNDSSRAG 243


>ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  188 bits (477), Expect = 4e-46
 Identities = 95/127 (74%), Positives = 107/127 (84%)
 Frame = -1

Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214
           LL  AINAA AALVDAGIP+KHLAVAI C L E G V+LDPTKLEEQKM+ F YLVFPNS
Sbjct: 115 LLVCAINAACAALVDAGIPMKHLAVAICCCLAEGGYVILDPTKLEEQKMRGFTYLVFPNS 174

Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34
           V S+LPE S  VEGE +EHG+ITSVTHGVMSV+ YL CLERGR+AS K+SDFLRRSLQS+
Sbjct: 175 VVSVLPEGSSHVEGEPMEHGIITSVTHGVMSVEEYLKCLERGRAASTKLSDFLRRSLQSQ 234

Query: 33  VPNDLPK 13
           +P+D  K
Sbjct: 235 LPSDSSK 241


>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  178 bits (452), Expect = 3e-43
 Identities = 90/129 (69%), Positives = 105/129 (81%)
 Frame = -1

Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214
           LLP AINA+ AALVDAGIPLKHLAVAISC L E+G V+LDPTK+EE+KMKA  +LVFPN+
Sbjct: 115 LLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNA 174

Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34
             S++PE S Q  GE LEHG+ITSVT G MSVD Y+HCLERGR+A+ KMS FLRRSLQ +
Sbjct: 175 PVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQ 234

Query: 33  VPNDLPKTG 7
           +P D  K G
Sbjct: 235 LPMDSSKAG 243


>ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  176 bits (447), Expect = 1e-42
 Identities = 89/129 (68%), Positives = 105/129 (81%)
 Frame = -1

Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214
           LLP AINA+ AALVDAGIPLKHLAVAISC L E+G V+LDPTK+EE+KMKA  +LVFPN+
Sbjct: 115 LLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNA 174

Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34
             S++PE S Q  GE LEHG+ITSVT G MSVD Y+HCLERGR+A+ KMS FLRRSLQ +
Sbjct: 175 PVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQ 234

Query: 33  VPNDLPKTG 7
           +P +  K G
Sbjct: 235 LPMNSSKAG 243