BLASTX nr result
ID: Coptis24_contig00013722
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013722 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46... 198 4e-49 emb|CBI20856.3| unnamed protein product [Vitis vinifera] 198 4e-49 ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2... 188 4e-46 ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46... 178 3e-43 ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46... 176 1e-42 >ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis vinifera] Length = 245 Score = 198 bits (503), Expect = 4e-49 Identities = 100/129 (77%), Positives = 110/129 (85%) Frame = -1 Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214 LLP AINAA AALVDA IPLKHLAVAI C L ESG V+LDPTK+EEQKMKAFAYLVFPNS Sbjct: 117 LLPCAINAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNS 176 Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34 SI+PE S +EGEL+EHG+ITSVTHGVMSVD YLHCLERG++AS KMS FLRRSLQS+ Sbjct: 177 AISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTKMSAFLRRSLQSQ 236 Query: 33 VPNDLPKTG 7 PND + G Sbjct: 237 APNDSSRAG 245 >emb|CBI20856.3| unnamed protein product [Vitis vinifera] Length = 243 Score = 198 bits (503), Expect = 4e-49 Identities = 100/129 (77%), Positives = 110/129 (85%) Frame = -1 Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214 LLP AINAA AALVDA IPLKHLAVAI C L ESG V+LDPTK+EEQKMKAFAYLVFPNS Sbjct: 115 LLPCAINAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNS 174 Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34 SI+PE S +EGEL+EHG+ITSVTHGVMSVD YLHCLERG++AS KMS FLRRSLQS+ Sbjct: 175 AISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTKMSAFLRRSLQSQ 234 Query: 33 VPNDLPKTG 7 PND + G Sbjct: 235 APNDSSRAG 243 >ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1| predicted protein [Populus trichocarpa] Length = 243 Score = 188 bits (477), Expect = 4e-46 Identities = 95/127 (74%), Positives = 107/127 (84%) Frame = -1 Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214 LL AINAA AALVDAGIP+KHLAVAI C L E G V+LDPTKLEEQKM+ F YLVFPNS Sbjct: 115 LLVCAINAACAALVDAGIPMKHLAVAICCCLAEGGYVILDPTKLEEQKMRGFTYLVFPNS 174 Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34 V S+LPE S VEGE +EHG+ITSVTHGVMSV+ YL CLERGR+AS K+SDFLRRSLQS+ Sbjct: 175 VVSVLPEGSSHVEGEPMEHGIITSVTHGVMSVEEYLKCLERGRAASTKLSDFLRRSLQSQ 234 Query: 33 VPNDLPK 13 +P+D K Sbjct: 235 LPSDSSK 241 >ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis sativus] Length = 243 Score = 178 bits (452), Expect = 3e-43 Identities = 90/129 (69%), Positives = 105/129 (81%) Frame = -1 Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214 LLP AINA+ AALVDAGIPLKHLAVAISC L E+G V+LDPTK+EE+KMKA +LVFPN+ Sbjct: 115 LLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNA 174 Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34 S++PE S Q GE LEHG+ITSVT G MSVD Y+HCLERGR+A+ KMS FLRRSLQ + Sbjct: 175 PVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQ 234 Query: 33 VPNDLPKTG 7 +P D K G Sbjct: 235 LPMDSSKAG 243 >ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis sativus] Length = 243 Score = 176 bits (447), Expect = 1e-42 Identities = 89/129 (68%), Positives = 105/129 (81%) Frame = -1 Query: 393 LLPSAINAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNS 214 LLP AINA+ AALVDAGIPLKHLAVAISC L E+G V+LDPTK+EE+KMKA +LVFPN+ Sbjct: 115 LLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNA 174 Query: 213 VASILPEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSR 34 S++PE S Q GE LEHG+ITSVT G MSVD Y+HCLERGR+A+ KMS FLRRSLQ + Sbjct: 175 PVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQ 234 Query: 33 VPNDLPKTG 7 +P + K G Sbjct: 235 LPMNSSKAG 243