BLASTX nr result
ID: Coptis24_contig00013712
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013712 (663 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277915.1| PREDICTED: mitochondrial import inner membra... 106 3e-21 ref|XP_002518947.1| Mitochondrial import inner membrane transloc... 99 7e-19 ref|NP_001151715.1| pale aleurone color1 [Zea mays] gi|194706278... 95 1e-17 ref|XP_002300520.1| predicted protein [Populus trichocarpa] gi|2... 95 1e-17 gb|ABK94454.1| unknown [Populus trichocarpa] 95 1e-17 >ref|XP_002277915.1| PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Vitis vinifera] gi|297742475|emb|CBI34624.3| unnamed protein product [Vitis vinifera] Length = 89 Score = 106 bits (265), Expect = 3e-21 Identities = 52/70 (74%), Positives = 55/70 (78%) Frame = +2 Query: 101 EDFMDQLKTQLAQAYAEEFLETIRGKCFEKCITKPGXXXXXXXXXXXXRCVDRYIEATGI 280 EDFMDQLKTQLAQAYAEEFLET+RGKCFEKCITKPG RCVDRYIEATGI Sbjct: 20 EDFMDQLKTQLAQAYAEEFLETVRGKCFEKCITKPGSSLSGSESSCISRCVDRYIEATGI 79 Query: 281 ISRSLFQNQR 310 IS++LF R Sbjct: 80 ISKALFSAPR 89 >ref|XP_002518947.1| Mitochondrial import inner membrane translocase subunit Tim13, putative [Ricinus communis] gi|223541934|gb|EEF43480.1| Mitochondrial import inner membrane translocase subunit Tim13, putative [Ricinus communis] Length = 88 Score = 99.0 bits (245), Expect = 7e-19 Identities = 46/65 (70%), Positives = 52/65 (80%) Frame = +2 Query: 104 DFMDQLKTQLAQAYAEEFLETIRGKCFEKCITKPGXXXXXXXXXXXXRCVDRYIEATGII 283 D MDQ+KTQLAQAYA+EFLET+RGKCF+KCITKPG RCVDRYIEATGI+ Sbjct: 20 DLMDQVKTQLAQAYAQEFLETVRGKCFDKCITKPGSSLSGSESSCISRCVDRYIEATGIV 79 Query: 284 SRSLF 298 SR+LF Sbjct: 80 SRALF 84 >ref|NP_001151715.1| pale aleurone color1 [Zea mays] gi|194706278|gb|ACF87223.1| unknown [Zea mays] gi|195649267|gb|ACG44101.1| mitochondrial import inner membrane translocase subunit Tim13 [Zea mays] gi|413938266|gb|AFW72817.1| import inner membrane translocase subunit Tim13 [Zea mays] Length = 87 Score = 95.1 bits (235), Expect = 1e-17 Identities = 44/67 (65%), Positives = 52/67 (77%) Frame = +2 Query: 110 MDQLKTQLAQAYAEEFLETIRGKCFEKCITKPGXXXXXXXXXXXXRCVDRYIEATGIISR 289 M+Q+KTQLAQAYA+EFLET+ KCFEKC+TKPG RCVDRYIEATGI+SR Sbjct: 21 MEQIKTQLAQAYAQEFLETVGNKCFEKCVTKPGSSLSGSESSCISRCVDRYIEATGIVSR 80 Query: 290 SLFQNQR 310 +LF +QR Sbjct: 81 ALFTSQR 87 >ref|XP_002300520.1| predicted protein [Populus trichocarpa] gi|222847778|gb|EEE85325.1| predicted protein [Populus trichocarpa] Length = 89 Score = 94.7 bits (234), Expect = 1e-17 Identities = 46/70 (65%), Positives = 51/70 (72%) Frame = +2 Query: 101 EDFMDQLKTQLAQAYAEEFLETIRGKCFEKCITKPGXXXXXXXXXXXXRCVDRYIEATGI 280 EDF DQLK QLAQAYA+EFLET+R KCF KCITKPG RCV+RYIEATGI Sbjct: 20 EDFKDQLKNQLAQAYAQEFLETVRDKCFAKCITKPGSSLSGSESSCISRCVERYIEATGI 79 Query: 281 ISRSLFQNQR 310 IS++LF R Sbjct: 80 ISKALFNAPR 89 >gb|ABK94454.1| unknown [Populus trichocarpa] Length = 150 Score = 94.7 bits (234), Expect = 1e-17 Identities = 46/70 (65%), Positives = 51/70 (72%) Frame = +2 Query: 101 EDFMDQLKTQLAQAYAEEFLETIRGKCFEKCITKPGXXXXXXXXXXXXRCVDRYIEATGI 280 EDF DQLK QLAQAYA+EFLET+R KCF KCITKPG RCV+RYIEATGI Sbjct: 20 EDFKDQLKNQLAQAYAQEFLETVRDKCFAKCITKPGSSLSGSESSCISRCVERYIEATGI 79 Query: 281 ISRSLFQNQR 310 IS++LF R Sbjct: 80 ISKALFNAPR 89