BLASTX nr result
ID: Coptis24_contig00013709
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013709 (625 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524529.1| PREDICTED: uncharacterized protein LOC100820... 77 3e-12 gb|ACU19699.1| unknown [Glycine max] 75 1e-11 ref|XP_002524438.1| conserved hypothetical protein [Ricinus comm... 74 2e-11 ref|XP_002316603.1| predicted protein [Populus trichocarpa] gi|1... 72 8e-11 ref|XP_002439373.1| hypothetical protein SORBIDRAFT_09g005320 [S... 66 6e-09 >ref|XP_003524529.1| PREDICTED: uncharacterized protein LOC100820016 [Glycine max] Length = 77 Score = 76.6 bits (187), Expect = 3e-12 Identities = 39/76 (51%), Positives = 45/76 (59%) Frame = -1 Query: 526 SSQSDISNGEGVVMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAGGL 347 ++ SD SN E VV R PP KF + R PV+RDRLFTAVLAG Sbjct: 2 ATPSDPSNQEAVVRRRNNGPPIKFLLPLIYAPVLPLIRLSLRHKPVLRDRLFTAVLAGAF 61 Query: 346 FHGFYLITDLYDVESK 299 HGFYL+TDLYD+ESK Sbjct: 62 AHGFYLVTDLYDIESK 77 >gb|ACU19699.1| unknown [Glycine max] Length = 77 Score = 75.1 bits (183), Expect = 1e-11 Identities = 38/76 (50%), Positives = 45/76 (59%) Frame = -1 Query: 526 SSQSDISNGEGVVMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAGGL 347 ++ SD SN E VV R PP KF + R PV+RDRLFTAVLAG Sbjct: 2 ATPSDPSNQEAVVRRRNNGPPIKFLLPLIYAPVLPLIRLSLRHKPVLRDRLFTAVLAGAF 61 Query: 346 FHGFYLITDLYDVESK 299 HGFYL+TDLYD+ES+ Sbjct: 62 AHGFYLVTDLYDIESE 77 >ref|XP_002524438.1| conserved hypothetical protein [Ricinus communis] gi|223536226|gb|EEF37878.1| conserved hypothetical protein [Ricinus communis] Length = 80 Score = 74.3 bits (181), Expect = 2e-11 Identities = 42/78 (53%), Positives = 48/78 (61%), Gaps = 1/78 (1%) Frame = -1 Query: 529 ASSQSDISNGEGVVMRPKRS-PPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAG 353 +SS SD S V +R + + PP KF A RRNPVVRDRLFTAVLAG Sbjct: 3 SSSSSDPSVRRDVAVRKQNNGPPVKFLVPLVYAPILPLIRIALRRNPVVRDRLFTAVLAG 62 Query: 352 GLFHGFYLITDLYDVESK 299 HGFYL+TD+YDVESK Sbjct: 63 AFAHGFYLVTDIYDVESK 80 >ref|XP_002316603.1| predicted protein [Populus trichocarpa] gi|118483510|gb|ABK93653.1| unknown [Populus trichocarpa] gi|222859668|gb|EEE97215.1| predicted protein [Populus trichocarpa] Length = 79 Score = 72.0 bits (175), Expect = 8e-11 Identities = 38/78 (48%), Positives = 44/78 (56%), Gaps = 2/78 (2%) Frame = -1 Query: 526 SSQSDISNGEGV--VMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAG 353 +S SD +N E + R K PP KF R+NPVVRDRLFTAVL G Sbjct: 2 ASPSDPTNPEAAAAIRRKKNGPPIKFLVPLVYAPVLPLIRLTLRKNPVVRDRLFTAVLVG 61 Query: 352 GLFHGFYLITDLYDVESK 299 HGFYL+TD+YD ESK Sbjct: 62 AFAHGFYLVTDIYDSESK 79 >ref|XP_002439373.1| hypothetical protein SORBIDRAFT_09g005320 [Sorghum bicolor] gi|241944658|gb|EES17803.1| hypothetical protein SORBIDRAFT_09g005320 [Sorghum bicolor] Length = 81 Score = 65.9 bits (159), Expect = 6e-09 Identities = 38/81 (46%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = -1 Query: 532 MASSQSDISNGEGVVMRP---KRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAV 362 MASS S S V RP +R PP+ R NPVVRDRLF V Sbjct: 1 MASSSSSSSRDPAAVRRPPQRERKPPYMLLLPLVYAPVLPLIRIGLRHNPVVRDRLFYGV 60 Query: 361 LAGGLFHGFYLITDLYDVESK 299 LAG HG YLI++LYDVESK Sbjct: 61 LAGAFAHGAYLISELYDVESK 81