BLASTX nr result

ID: Coptis24_contig00013709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013709
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524529.1| PREDICTED: uncharacterized protein LOC100820...    77   3e-12
gb|ACU19699.1| unknown [Glycine max]                                   75   1e-11
ref|XP_002524438.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002316603.1| predicted protein [Populus trichocarpa] gi|1...    72   8e-11
ref|XP_002439373.1| hypothetical protein SORBIDRAFT_09g005320 [S...    66   6e-09

>ref|XP_003524529.1| PREDICTED: uncharacterized protein LOC100820016 [Glycine max]
          Length = 77

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/76 (51%), Positives = 45/76 (59%)
 Frame = -1

Query: 526 SSQSDISNGEGVVMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAGGL 347
           ++ SD SN E VV R    PP KF               + R  PV+RDRLFTAVLAG  
Sbjct: 2   ATPSDPSNQEAVVRRRNNGPPIKFLLPLIYAPVLPLIRLSLRHKPVLRDRLFTAVLAGAF 61

Query: 346 FHGFYLITDLYDVESK 299
            HGFYL+TDLYD+ESK
Sbjct: 62  AHGFYLVTDLYDIESK 77


>gb|ACU19699.1| unknown [Glycine max]
          Length = 77

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 38/76 (50%), Positives = 45/76 (59%)
 Frame = -1

Query: 526 SSQSDISNGEGVVMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAGGL 347
           ++ SD SN E VV R    PP KF               + R  PV+RDRLFTAVLAG  
Sbjct: 2   ATPSDPSNQEAVVRRRNNGPPIKFLLPLIYAPVLPLIRLSLRHKPVLRDRLFTAVLAGAF 61

Query: 346 FHGFYLITDLYDVESK 299
            HGFYL+TDLYD+ES+
Sbjct: 62  AHGFYLVTDLYDIESE 77


>ref|XP_002524438.1| conserved hypothetical protein [Ricinus communis]
           gi|223536226|gb|EEF37878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 80

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/78 (53%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -1

Query: 529 ASSQSDISNGEGVVMRPKRS-PPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAG 353
           +SS SD S    V +R + + PP KF               A RRNPVVRDRLFTAVLAG
Sbjct: 3   SSSSSDPSVRRDVAVRKQNNGPPVKFLVPLVYAPILPLIRIALRRNPVVRDRLFTAVLAG 62

Query: 352 GLFHGFYLITDLYDVESK 299
              HGFYL+TD+YDVESK
Sbjct: 63  AFAHGFYLVTDIYDVESK 80


>ref|XP_002316603.1| predicted protein [Populus trichocarpa] gi|118483510|gb|ABK93653.1|
           unknown [Populus trichocarpa]
           gi|222859668|gb|EEE97215.1| predicted protein [Populus
           trichocarpa]
          Length = 79

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 38/78 (48%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = -1

Query: 526 SSQSDISNGEGV--VMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAG 353
           +S SD +N E    + R K  PP KF                 R+NPVVRDRLFTAVL G
Sbjct: 2   ASPSDPTNPEAAAAIRRKKNGPPIKFLVPLVYAPVLPLIRLTLRKNPVVRDRLFTAVLVG 61

Query: 352 GLFHGFYLITDLYDVESK 299
              HGFYL+TD+YD ESK
Sbjct: 62  AFAHGFYLVTDIYDSESK 79


>ref|XP_002439373.1| hypothetical protein SORBIDRAFT_09g005320 [Sorghum bicolor]
           gi|241944658|gb|EES17803.1| hypothetical protein
           SORBIDRAFT_09g005320 [Sorghum bicolor]
          Length = 81

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/81 (46%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = -1

Query: 532 MASSQSDISNGEGVVMRP---KRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAV 362
           MASS S  S     V RP   +R PP+                   R NPVVRDRLF  V
Sbjct: 1   MASSSSSSSRDPAAVRRPPQRERKPPYMLLLPLVYAPVLPLIRIGLRHNPVVRDRLFYGV 60

Query: 361 LAGGLFHGFYLITDLYDVESK 299
           LAG   HG YLI++LYDVESK
Sbjct: 61  LAGAFAHGAYLISELYDVESK 81


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