BLASTX nr result

ID: Coptis24_contig00013707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013707
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japo...    60   6e-07
gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indi...    60   6e-07
gb|ABF99327.1| 5'-3' exoribonuclease, putative, expressed [Oryza...    60   6e-07
gb|ABF99328.1| 5'-3' exoribonuclease, putative, expressed [Oryza...    60   6e-07
ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group] g...    60   6e-07

>gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
          Length = 997

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/40 (70%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = +2

Query: 2   YVEGLCWVMRYYYQGVCSWQW--SVHYASNRKFISNYFCL 115
           YVEGLCWVMRYYYQGVCSWQW    HYA    F S+  CL
Sbjct: 479 YVEGLCWVMRYYYQGVCSWQWFYPYHYA---PFASDLKCL 515


>gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indica Group]
          Length = 997

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/40 (70%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = +2

Query: 2   YVEGLCWVMRYYYQGVCSWQW--SVHYASNRKFISNYFCL 115
           YVEGLCWVMRYYYQGVCSWQW    HYA    F S+  CL
Sbjct: 479 YVEGLCWVMRYYYQGVCSWQWFYPYHYA---PFASDLKCL 515


>gb|ABF99327.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 682

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/40 (70%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = +2

Query: 2   YVEGLCWVMRYYYQGVCSWQW--SVHYASNRKFISNYFCL 115
           YVEGLCWVMRYYYQGVCSWQW    HYA    F S+  CL
Sbjct: 470 YVEGLCWVMRYYYQGVCSWQWFYPYHYA---PFASDLKCL 506


>gb|ABF99328.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 718

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/40 (70%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = +2

Query: 2   YVEGLCWVMRYYYQGVCSWQW--SVHYASNRKFISNYFCL 115
           YVEGLCWVMRYYYQGVCSWQW    HYA    F S+  CL
Sbjct: 470 YVEGLCWVMRYYYQGVCSWQWFYPYHYA---PFASDLKCL 506


>ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group]
           gi|50400038|gb|AAT76426.1| putative 5'-3' exonuclease
           [Oryza sativa Japonica Group]
           gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa
           Japonica Group]
          Length = 988

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/40 (70%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = +2

Query: 2   YVEGLCWVMRYYYQGVCSWQW--SVHYASNRKFISNYFCL 115
           YVEGLCWVMRYYYQGVCSWQW    HYA    F S+  CL
Sbjct: 470 YVEGLCWVMRYYYQGVCSWQWFYPYHYA---PFASDLKCL 506


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