BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013704
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40351.3| unnamed protein product [Vitis vinifera]              179   4e-43
ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein R...   179   4e-43
ref|XP_002302581.1| predicted protein [Populus trichocarpa] gi|2...   176   4e-42
ref|XP_003529946.1| PREDICTED: riboflavin biosynthesis protein R...   157   1e-36
ref|XP_003521898.1| PREDICTED: riboflavin biosynthesis protein R...   152   8e-35

>emb|CBI40351.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  179 bits (455), Expect = 4e-43
 Identities = 100/198 (50%), Positives = 132/198 (66%), Gaps = 4/198 (2%)
 Frame = -2

Query: 692 VNGRISDLLGEGVKESGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVA 513
           +NG I D LGEGV+E+GGYYSQL+QEYD II S  ++T K SFP SQEP A QPL I++A
Sbjct: 151 INGHILDQLGEGVEEAGGYYSQLVQEYDAIILSPTTVTEKFSFPASQEPGANQPLHILIA 210

Query: 512 NSPNSTVQLPRLADEA-SQVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDYCGKRG 336
            SP S  Q+P    EA S+VIIFAD  T ++PE+ Q+GIETVVLDQ++LN +L+YC ++G
Sbjct: 211 KSPISPNQIPIPHTEATSKVIIFADNETAVEPEMVQKGIETVVLDQINLNAVLEYCKRQG 270

Query: 335 LCSVLLDLHXXXXXXXXXXXXXXXXXXXXKVVVEVLPFWDESNDR---LTLENLKQKVLQ 165
           LCS+LLDL                     KVVVEVLPFW  + +    L L+NL+ K ++
Sbjct: 271 LCSILLDLRGNFGYFEDLLKQSLEENLLQKVVVEVLPFWSTNEEEGLPLALKNLR-KGIR 329

Query: 164 LDRLHSDISGETLVVYGY 111
           L  + S  S +++V+ GY
Sbjct: 330 LKNITSRNSNDSVVLEGY 347


>ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis
           vinifera]
          Length = 379

 Score =  179 bits (455), Expect = 4e-43
 Identities = 100/198 (50%), Positives = 132/198 (66%), Gaps = 4/198 (2%)
 Frame = -2

Query: 692 VNGRISDLLGEGVKESGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVA 513
           +NG I D LGEGV+E+GGYYSQL+QEYD II S  ++T K SFP SQEP A QPL I++A
Sbjct: 182 INGHILDQLGEGVEEAGGYYSQLVQEYDAIILSPTTVTEKFSFPASQEPGANQPLHILIA 241

Query: 512 NSPNSTVQLPRLADEA-SQVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDYCGKRG 336
            SP S  Q+P    EA S+VIIFAD  T ++PE+ Q+GIETVVLDQ++LN +L+YC ++G
Sbjct: 242 KSPISPNQIPIPHTEATSKVIIFADNETAVEPEMVQKGIETVVLDQINLNAVLEYCKRQG 301

Query: 335 LCSVLLDLHXXXXXXXXXXXXXXXXXXXXKVVVEVLPFWDESNDR---LTLENLKQKVLQ 165
           LCS+LLDL                     KVVVEVLPFW  + +    L L+NL+ K ++
Sbjct: 302 LCSILLDLRGNFGYFEDLLKQSLEENLLQKVVVEVLPFWSTNEEEGLPLALKNLR-KGIR 360

Query: 164 LDRLHSDISGETLVVYGY 111
           L  + S  S +++V+ GY
Sbjct: 361 LKNITSRNSNDSVVLEGY 378


>ref|XP_002302581.1| predicted protein [Populus trichocarpa] gi|222844307|gb|EEE81854.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  176 bits (446), Expect = 4e-42
 Identities = 99/198 (50%), Positives = 132/198 (66%), Gaps = 4/198 (2%)
 Frame = -2

Query: 692 VNGRISDLLGEGVKESGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVA 513
           VNG + + LGEGV ++GGYYSQLLQEYD +I S AS+TG S FP SQEP A QPL I++A
Sbjct: 181 VNGHLVNQLGEGVTDTGGYYSQLLQEYDAVILS-ASLTGSSPFPASQEPGANQPLWILMA 239

Query: 512 NSPNSTVQLPRLADEA-SQVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDYCGKRG 336
             P+S +Q+P L +EA S+V IF DK    +PE +++GIETVVLD+++LN IL+YC  RG
Sbjct: 240 GGPSSPIQIPLLTEEAASKVTIFTDKEASEEPETSKKGIETVVLDKINLNAILEYCKSRG 299

Query: 335 LCSVLLDLHXXXXXXXXXXXXXXXXXXXXKVVVEVLPFWDESN--DRLTLENLKQKVLQL 162
           LCSVL+DL                     K+VVEVLPFWDES+    LT     ++ L++
Sbjct: 300 LCSVLMDLRGSFVELEELLKDGTEQNLLQKIVVEVLPFWDESSGLSSLTASKSIRRRLKV 359

Query: 161 DRLHSDISG-ETLVVYGY 111
           + L   ISG +++V+ GY
Sbjct: 360 NNLQPKISGDQSIVLEGY 377


>ref|XP_003529946.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max]
          Length = 424

 Score =  157 bits (398), Expect = 1e-36
 Identities = 88/200 (44%), Positives = 125/200 (62%), Gaps = 4/200 (2%)
 Frame = -2

Query: 692 VNGRISDLLGEGVKESGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVA 513
           VNG   DLLG+GV + GGYYS+LLQEYD ++ SS+  +   S P SQEP A QP++II+ 
Sbjct: 225 VNGNFMDLLGDGVTDCGGYYSRLLQEYDAVVISSSLFSENLSVPASQEPGANQPIRIILH 284

Query: 512 NSPNSTVQLPRLADEAS-QVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDYCGKRG 336
             P+S+ Q+P   +  + +VIIF D  TV  PE+AQ+GIETV LDQ++L+ ILDYC ++G
Sbjct: 285 KDPSSSNQIPLAINGVTHKVIIFTDNKTVTAPEVAQQGIETVALDQINLDVILDYCNRQG 344

Query: 335 LCSVLLDLHXXXXXXXXXXXXXXXXXXXXKVVVEVLPFWD---ESNDRLTLENLKQKVLQ 165
           LCSVLLD+                     K V E+LP W+   E +   TL++L+Q   +
Sbjct: 345 LCSVLLDIRGSFGEFEDLVKEGIKKNYINKFVTEILPVWNGHTEPDPLHTLKSLEQGA-E 403

Query: 164 LDRLHSDISGETLVVYGYFR 105
           +  L S  S +++V+ GYF+
Sbjct: 404 VVNLKSKASDKSVVIEGYFK 423


>ref|XP_003521898.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max]
          Length = 425

 Score =  152 bits (383), Expect = 8e-35
 Identities = 86/199 (43%), Positives = 119/199 (59%), Gaps = 3/199 (1%)
 Frame = -2

Query: 692 VNGRISDLLGEGVKESGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVA 513
           VNG   DLLG GV + GGY+S+LLQEYD ++ SS+  +   S P SQEP A QP++II+ 
Sbjct: 226 VNGNFLDLLGNGVTDCGGYHSRLLQEYDAVVISSSLFSENLSVPASQEPGANQPIRIIIH 285

Query: 512 NSPNSTVQLP-RLADEASQVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDYCGKRG 336
             P S+ Q+   +     +VIIF D  TV  PE+AQ+GIE VVLDQ++L+ ILDYC  +G
Sbjct: 286 KDPGSSKQIQLAINGVTGKVIIFTDNKTVTAPEVAQQGIEIVVLDQINLDVILDYCNCQG 345

Query: 335 LCSVLLDLHXXXXXXXXXXXXXXXXXXXXKVVVEVLPFWDESNDRLTLENLK--QKVLQL 162
           LCSVLLD+                     K V E+LP WD   +   L+ LK  ++ L++
Sbjct: 346 LCSVLLDIRGSFGEFEELVKEGIKKNYINKFVTEILPVWDGLAEPDPLQTLKSSEQGLKV 405

Query: 161 DRLHSDISGETLVVYGYFR 105
             L S  S +++V+ GYF+
Sbjct: 406 VNLKSMASDQSVVIEGYFK 424