BLASTX nr result
ID: Coptis24_contig00013694
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013694
(1409 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|2... 607 e-171
ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange f... 590 e-166
emb|CBI29214.3| unnamed protein product [Vitis vinifera] 570 e-160
ref|XP_002519922.1| Rop guanine nucleotide exchange factor, puta... 570 e-160
ref|XP_002304399.1| predicted protein [Populus trichocarpa] gi|2... 568 e-160
>ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|222834106|gb|EEE72583.1|
predicted protein [Populus trichocarpa]
Length = 568
Score = 607 bits (1564), Expect = e-171
Identities = 306/453 (67%), Positives = 359/453 (79%), Gaps = 1/453 (0%)
Frame = +1
Query: 1 QTFDVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERK 180
Q DVETMKEKF+KLLLGEDITGG++GL+TALALSNAITNLAA+VFGELWKLEPL EERK
Sbjct: 115 QYSDVETMKEKFAKLLLGEDITGGQSGLSTALALSNAITNLAATVFGELWKLEPLPEERK 174
Query: 181 SRWQREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 360
++WQREM W LSPTNYMVELVPAKQN +G+ LEIMTPK R+DIHVNLPALQKLDSMLI+
Sbjct: 175 TKWQREMDWLLSPTNYMVELVPAKQNCANGRMLEIMTPKARADIHVNLPALQKLDSMLID 234
Query: 361 TLDSMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVD 540
TLD+MVNTEFWY E GSRAEGRTK+ + KRWWLP PQVP GLS SGRKKLL Q KVV
Sbjct: 235 TLDAMVNTEFWYSEVGSRAEGRTKSAKQSKRWWLPLPQVPTTGLSDSGRKKLLNQSKVVY 294
Query: 541 QVFKAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLK 720
QVFKAAK +N VLLEMPVPTII+DALPKSG+ANLGE LYKVL+ + N+ EEML SLDLK
Sbjct: 295 QVFKAAKSVNETVLLEMPVPTIIKDALPKSGKANLGEELYKVLTADSNTAEEMLNSLDLK 354
Query: 721 NEHTVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLMKDSVSELDKAXXXXXXXXXX 900
+EH+ L+ +NKLE + AWK++++ QV GRSP+R SWS +KD VSE DK
Sbjct: 355 SEHSALEAVNKLEAAIFAWKERVTAQVSGRSPVRTSWSFVKDPVSEFDKMESLLDSAESL 414
Query: 901 XXXXKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELS 1080
K R+PNLPQTFLD TKVQY KDVG++ILEAYSR++G++AFS+LSRI D++QED L+
Sbjct: 415 LQLLKSRYPNLPQTFLDSTKVQYGKDVGHAILEAYSRVLGNVAFSILSRIADVMQEDSLT 474
Query: 1081 NPNSPAATCCYSSINLSGIFETPRAGTHLRHSL-IDQMNKVDGESDYSNPNNALDVNFTD 1257
NP+SPAATCC+ IN SG ETP H+RHSL ID+MN VDG+ SN ++ D +
Sbjct: 475 NPSSPAATCCFPGINSSGYVETPVHVLHVRHSLIIDEMNNVDGKYRESNASHISDQELSY 534
Query: 1258 CEVKTCSLTSKPSRSRVWYIGKKACSGLPRTSS 1356
E +T S + PSRSRVW IG AC L T+S
Sbjct: 535 SEARTSSAIATPSRSRVWCIGGDACRSLSPTNS 567
>ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
vinifera]
Length = 570
Score = 590 bits (1521), Expect = e-166
Identities = 297/450 (66%), Positives = 354/450 (78%), Gaps = 2/450 (0%)
Frame = +1
Query: 10 DVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERKSRW 189
DVE MKE+FSKLLLGEDITGG+ GLT+ALALSNAITNLA SVFGELWKLEPLSEERK +W
Sbjct: 120 DVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERKVKW 179
Query: 190 QREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIETLD 369
QREM W LSPTNYMVELVPAKQ+G +G+TLEIMTPK R+DIH+NLPALQKLDSMLIETLD
Sbjct: 180 QREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIETLD 239
Query: 370 SMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVDQVF 549
SMV+TEFWY E GSRAEGRT++ KRWWLPSPQVP GLS RKKLL+Q KVV QVF
Sbjct: 240 SMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVHQVF 299
Query: 550 KAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLKNEH 729
KAA+ IN VLLEMPVPT+IRDAL KSG+ANLGE LY+VL+ E +S EEML+SL+LK+EH
Sbjct: 300 KAARAINENVLLEMPVPTLIRDALAKSGKANLGEELYRVLTAESSSAEEMLSSLNLKSEH 359
Query: 730 TVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLMKDSVSELDKAXXXXXXXXXXXXX 909
+ L+ +N+LE V AWK++I+EQV G+SP+R SWS +KD +ELDK
Sbjct: 360 SALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFIKDPTTELDKMELILFRAEALLQQ 419
Query: 910 XKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELSNPN 1089
+ R+PNLPQ+FLDV K+QY KD+G+SILEAYSR++G+LA S+L R++DILQED SNPN
Sbjct: 420 LRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLGNLASSILCRMRDILQEDVFSNPN 479
Query: 1090 SP-AATCCYSSINLSGIFETPRAGTHLRHSLIDQMNKVDGESDYSNPNNALDVNFTDCEV 1266
SP A T C+ INL+G+ ETP +RHSLIDQMN VDG N + D + +
Sbjct: 480 SPIATTSCFPGINLTGMTETPTPSLRIRHSLIDQMNMVDGRFRDPNAGASPDCEASYSDS 539
Query: 1267 KTCSLTSKPSRSRVWYIGKKACSGL-PRTS 1353
+ S+ + PSRSRVW IG++ACS L PR S
Sbjct: 540 RRSSVMATPSRSRVWCIGREACSSLSPRNS 569
>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 570 bits (1470), Expect = e-160
Identities = 286/433 (66%), Positives = 341/433 (78%), Gaps = 1/433 (0%)
Frame = +1
Query: 10 DVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERKSRW 189
DVE MKE+FSKLLLGEDITGG+ GLT+ALALSNAITNLA SVFGELWKLEPLSEERK +W
Sbjct: 119 DVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERKVKW 178
Query: 190 QREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIETLD 369
QREM W LSPTNYMVELVPAKQ+G +G+TLEIMTPK R+DIH+NLPALQKLDSMLIETLD
Sbjct: 179 QREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIETLD 238
Query: 370 SMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVDQVF 549
SMV+TEFWY E GSRAEGRT++ KRWWLPSPQVP GLS RKKLL+Q KVV QVF
Sbjct: 239 SMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVHQVF 298
Query: 550 KAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLKNEH 729
KAA+ IN VLLEMPVPT+IRDAL KSG+ANLGE LY+VL+ E +S EEML+SL+LK+EH
Sbjct: 299 KAARAINENVLLEMPVPTLIRDALAKSGKANLGEELYRVLTAESSSAEEMLSSLNLKSEH 358
Query: 730 TVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLMKDSVSELDKAXXXXXXXXXXXXX 909
+ L+ +N+LE V AWK++I+EQV G+SP+R SWS +KD +ELDK
Sbjct: 359 SALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFIKDPTTELDKMELILFRAEALLQQ 418
Query: 910 XKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELSNPN 1089
+ R+PNLPQ+FLDV K+QY KD+G+SILEAYSR++G+LA S+L R++DILQED SNPN
Sbjct: 419 LRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLGNLASSILCRMRDILQEDVFSNPN 478
Query: 1090 SP-AATCCYSSINLSGIFETPRAGTHLRHSLIDQMNKVDGESDYSNPNNALDVNFTDCEV 1266
SP A T C+ INL+G+ ETP +RHSLIDQMN VDG N + D + +
Sbjct: 479 SPIATTSCFPGINLTGMTETPTPSLRIRHSLIDQMNMVDGRFRDPNAGASPDCEASYSDS 538
Query: 1267 KTCSLTSKPSRSR 1305
+ S+ + PSRSR
Sbjct: 539 RRSSVMATPSRSR 551
>ref|XP_002519922.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
gi|223540968|gb|EEF42526.1| Rop guanine nucleotide
exchange factor, putative [Ricinus communis]
Length = 526
Score = 570 bits (1470), Expect = e-160
Identities = 286/452 (63%), Positives = 344/452 (76%)
Frame = +1
Query: 1 QTFDVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERK 180
Q DVETMKEKF+KLLLGEDITGG GLTTALALSNAI NLAASVFGELWKLEPL EE K
Sbjct: 89 QYSDVETMKEKFAKLLLGEDITGGCKGLTTALALSNAIANLAASVFGELWKLEPLPEENK 148
Query: 181 SRWQREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 360
+W++E+ W LSPTNYMVELVP KQNG +G+TLEIMTPK R+DIHVNLPALQKLDSMLIE
Sbjct: 149 KKWRKELDWLLSPTNYMVELVPTKQNGANGRTLEIMTPKARADIHVNLPALQKLDSMLIE 208
Query: 361 TLDSMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVD 540
TLDSMVN EFWY E GSRAEGR+K+ + KRWWLP PQVP GLS S RKKLL++ KVV
Sbjct: 209 TLDSMVNNEFWYSEVGSRAEGRSKSTKQSKRWWLPLPQVPTTGLSDSERKKLLHKSKVVY 268
Query: 541 QVFKAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLK 720
QVFKAAK IN +LLEMPVPTIIRDALPKSG+ NLGE LYK+L+TE + E+ML SLDLK
Sbjct: 269 QVFKAAKSINENILLEMPVPTIIRDALPKSGKTNLGEELYKILTTESKTAEDMLNSLDLK 328
Query: 721 NEHTVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLMKDSVSELDKAXXXXXXXXXX 900
+EH+ ++++NKLE + AWKQKI+ Q+ G+SP+R SWS +KD +SE DK
Sbjct: 329 SEHSAIEVINKLEAALFAWKQKITAQISGKSPVRTSWSFVKDPMSEFDKTESLLDRAEAL 388
Query: 901 XXXXKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELS 1080
K R+PNLPQTFL+ TK+QY KDVG+SILEAYSR++G+LAFS+L RI DILQED +
Sbjct: 389 LQQVKARYPNLPQTFLEATKIQYGKDVGHSILEAYSRVLGNLAFSILCRIGDILQEDAST 448
Query: 1081 NPNSPAATCCYSSINLSGIFETPRAGTHLRHSLIDQMNKVDGESDYSNPNNALDVNFTDC 1260
NPNSP + CC+ G ETP + ++K DG+ SN + + D+ F+
Sbjct: 449 NPNSPVSICCF-----PGTLETP----------VHMLHKADGKYRESNASYSSDMGFSYS 493
Query: 1261 EVKTCSLTSKPSRSRVWYIGKKACSGLPRTSS 1356
E K S+T+ PSR RVW IG++AC G+ ++S
Sbjct: 494 EAKASSVTATPSRRRVWCIGREACIGVSPSNS 525
>ref|XP_002304399.1| predicted protein [Populus trichocarpa] gi|222841831|gb|EEE79378.1|
predicted protein [Populus trichocarpa]
Length = 543
Score = 568 bits (1465), Expect = e-160
Identities = 288/447 (64%), Positives = 343/447 (76%)
Frame = +1
Query: 1 QTFDVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERK 180
Q DVETMKEKF+KLLLGED TGGRNGL+ ALALSNAITNLAA+VFGELWKL+PL EERK
Sbjct: 89 QYSDVETMKEKFAKLLLGEDFTGGRNGLSPALALSNAITNLAATVFGELWKLQPLPEERK 148
Query: 181 SRWQREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 360
++W+REM W LSPTNYMVELVPAKQN +G+ LEIMTPK R+DIHVNLPALQKLDSMLI+
Sbjct: 149 TKWRREMDWLLSPTNYMVELVPAKQNCANGRALEIMTPKARADIHVNLPALQKLDSMLID 208
Query: 361 TLDSMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVD 540
TLDSMVNTEFWY E GSRAEGRTK+ + KRWWLP PQVP GLS SGR KLL Q KVV
Sbjct: 209 TLDSMVNTEFWYSEVGSRAEGRTKSAKESKRWWLPLPQVPTNGLSDSGRTKLLNQSKVVY 268
Query: 541 QVFKAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLK 720
QVFKAAK IN +LLEMPVPTII+DALPKSG+ANLGE LYK+L+ E N+ EEML SL+L+
Sbjct: 269 QVFKAAKSINETILLEMPVPTIIKDALPKSGKANLGEELYKLLTAESNTAEEMLDSLNLQ 328
Query: 721 NEHTVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLMKDSVSELDKAXXXXXXXXXX 900
+EH+ L+ +NKLE AWK +++ QV +SP+R WS +KD VSE +K
Sbjct: 329 SEHSALEAINKLEAAAFAWKDRMTAQVGVKSPVRTPWSFVKDPVSEFEKMESLLDRTESL 388
Query: 901 XXXXKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELS 1080
K R+PNLPQTFLD TK+Q+ KDVG++ILEAYSR++G+LAFS+LSRI DI+QED L+
Sbjct: 389 LQQLKSRYPNLPQTFLDSTKIQFGKDVGHAILEAYSRVLGNLAFSILSRIADIMQEDSLT 448
Query: 1081 NPNSPAATCCYSSINLSGIFETPRAGTHLRHSLIDQMNKVDGESDYSNPNNALDVNFTDC 1260
NP+SPAATCC+ IN SG ETP +++NKVD + SN ++ D +
Sbjct: 449 NPSSPAATCCFPGINSSGYVETPAMSYISDTHSSNRLNKVDVKHRKSNASHISDQELSCS 508
Query: 1261 EVKTCSLTSKPSRSRVWYIGKKACSGL 1341
E +T S+ + PSRSRVW IG AC L
Sbjct: 509 EARTSSVIATPSRSRVWCIGGDACRSL 535