BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013689
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm...   203   1e-50
ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...   201   7e-50
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-45
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...   181   5e-44
ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago...   180   9e-44

>ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549920|gb|EEF51407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score =  203 bits (517), Expect = 1e-50
 Identities = 95/121 (78%), Positives = 109/121 (90%)
 Frame = -2

Query: 413 QCVLLNSESLCDGCFTADSDVFLFGAKTIYRDIDLGDGGHVVCYEMVDIERKLGFGRNSL 234
           QC LLNSESLCDGCF++DSDVFLFGA+T+YRDI LGDGGHVVCYEM DIERKLGFGRNSL
Sbjct: 147 QCALLNSESLCDGCFSSDSDVFLFGARTVYRDICLGDGGHVVCYEMADIERKLGFGRNSL 206

Query: 233 ITLALLLGSDYSHGVHGFGPETACQIVRSLGDHNVLRQVASEGFAFVKKTKGLKKQGEVR 54
           ITLALLLGSDYS GV G GPE+ACQIV+S+GDHNVL+Q+AS G +F KKTK  KKQ +++
Sbjct: 207 ITLALLLGSDYSQGVRGLGPESACQIVKSVGDHNVLQQIASGGLSFAKKTKASKKQTQLK 266

Query: 53  N 51
           +
Sbjct: 267 S 267


>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
           gi|297741051|emb|CBI31782.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  201 bits (510), Expect = 7e-50
 Identities = 95/128 (74%), Positives = 113/128 (88%)
 Frame = -2

Query: 413 QCVLLNSESLCDGCFTADSDVFLFGAKTIYRDIDLGDGGHVVCYEMVDIERKLGFGRNSL 234
           QC LLNSESLCDGCFT+DSDVFLFGA+T+YRDI LG+GG+VVCYEM DIE  LGFGRNSL
Sbjct: 146 QCALLNSESLCDGCFTSDSDVFLFGARTVYRDICLGEGGYVVCYEMADIESTLGFGRNSL 205

Query: 233 ITLALLLGSDYSHGVHGFGPETACQIVRSLGDHNVLRQVASEGFAFVKKTKGLKKQGEVR 54
           ITLALLLGSDYS GVHGFGPE+ACQIV+S+G+  VL+++A EG +F KK+KG +KQG+V 
Sbjct: 206 ITLALLLGSDYSQGVHGFGPESACQIVKSVGEEVVLKKIALEGISFAKKSKGSRKQGQVL 265

Query: 53  NCDANKEN 30
            C+ +KEN
Sbjct: 266 KCN-DKEN 272


>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  185 bits (470), Expect = 3e-45
 Identities = 88/116 (75%), Positives = 103/116 (88%)
 Frame = -2

Query: 413 QCVLLNSESLCDGCFTADSDVFLFGAKTIYRDIDLGDGGHVVCYEMVDIERKLGFGRNSL 234
           QC LLN+ESLCDGCF++DSDVFLFGA+T+YRDI LG+G HVVCYEM ++ERKLGFGRNSL
Sbjct: 147 QCALLNTESLCDGCFSSDSDVFLFGARTVYRDICLGEG-HVVCYEMEEVERKLGFGRNSL 205

Query: 233 ITLALLLGSDYSHGVHGFGPETACQIVRSLGDHNVLRQVASEGFAFVKKTKGLKKQ 66
           ITLAL+LGSDYS GVHG GPE+ACQIV+S+GD NVL+++ASEG  F KK K  KKQ
Sbjct: 206 ITLALILGSDYSPGVHGLGPESACQIVKSIGDSNVLQKIASEGLPFAKKIKTSKKQ 261


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score =  181 bits (459), Expect = 5e-44
 Identities = 83/113 (73%), Positives = 99/113 (87%)
 Frame = -2

Query: 413 QCVLLNSESLCDGCFTADSDVFLFGAKTIYRDIDLGDGGHVVCYEMVDIERKLGFGRNSL 234
           QC LLN ESLCDGCF++DSD+FLFGA+T+YRDI LGDGG+VVCYEM DIERKLGFGR+SL
Sbjct: 148 QCALLNFESLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMTDIERKLGFGRDSL 207

Query: 233 ITLALLLGSDYSHGVHGFGPETACQIVRSLGDHNVLRQVASEGFAFVKKTKGL 75
           I L+LLLGSDY  GVHG GPE+ACQIV+S+GD  +L++ ASEG  +VKK KG+
Sbjct: 208 IALSLLLGSDYYQGVHGLGPESACQIVKSIGDKYILKKFASEGLGWVKKRKGI 260


>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 571

 Score =  180 bits (457), Expect = 9e-44
 Identities = 84/112 (75%), Positives = 99/112 (88%)
 Frame = -2

Query: 413 QCVLLNSESLCDGCFTADSDVFLFGAKTIYRDIDLGDGGHVVCYEMVDIERKLGFGRNSL 234
           QC LLNSESLCDGCF++DSD+FLFGA+T+YRDI LGDGG+VVCYEM DIERKLGFGR+SL
Sbjct: 146 QCALLNSESLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMADIERKLGFGRDSL 205

Query: 233 ITLALLLGSDYSHGVHGFGPETACQIVRSLGDHNVLRQVASEGFAFVKKTKG 78
           I L+LLLGSDY  GVHG GP++ACQIV+S+GD  VL++ ASEG  +VKK KG
Sbjct: 206 ICLSLLLGSDYYPGVHGLGPDSACQIVKSIGDKFVLKKFASEGLGWVKKRKG 257