BLASTX nr result
ID: Coptis24_contig00013688
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013688 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like... 82 6e-25 ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm... 80 1e-23 ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2... 75 3e-22 ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like... 66 2e-19 ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago... 63 2e-18 >ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera] gi|297741051|emb|CBI31782.3| unnamed protein product [Vitis vinifera] Length = 565 Score = 82.4 bits (202), Expect(2) = 6e-25 Identities = 38/61 (62%), Positives = 50/61 (81%) Frame = -1 Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKGLKKQGEVRNCDANKE 31 GSDYS GVHGFGPE+ACQIV+S G+ VL+++A EG +F KK+KG +KQG+V C+ +KE Sbjct: 213 GSDYSQGVHGFGPESACQIVKSVGEEVVLKKIALEGISFAKKSKGSRKQGQVLKCN-DKE 271 Query: 30 N 28 N Sbjct: 272 N 272 Score = 56.6 bits (135), Expect(2) = 6e-25 Identities = 25/32 (78%), Positives = 28/32 (87%) Frame = -3 Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDLDYTG 221 ESLCDGCFT+DSDVFLFGA+T+YRDI L G Sbjct: 153 ESLCDGCFTSDSDVFLFGARTVYRDICLGEGG 184 >ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis] gi|223549920|gb|EEF51407.1| conserved hypothetical protein [Ricinus communis] Length = 586 Score = 80.1 bits (196), Expect(2) = 1e-23 Identities = 36/54 (66%), Positives = 44/54 (81%) Frame = -1 Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKGLKKQGEVRN 49 GSDYS GV G GPE+ACQIV+S GDHNVLQQ+AS G +F KKTK KKQ ++++ Sbjct: 214 GSDYSQGVRGLGPESACQIVKSVGDHNVLQQIASGGLSFAKKTKASKKQTQLKS 267 Score = 54.7 bits (130), Expect(2) = 1e-23 Identities = 23/28 (82%), Positives = 27/28 (96%) Frame = -3 Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDL 233 ESLCDGCF++DSDVFLFGA+T+YRDI L Sbjct: 154 ESLCDGCFSSDSDVFLFGARTVYRDICL 181 >ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1| predicted protein [Populus trichocarpa] Length = 541 Score = 75.1 bits (183), Expect(2) = 3e-22 Identities = 35/49 (71%), Positives = 39/49 (79%) Frame = -1 Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKGLKKQ 64 GSDYS GVHG GPE+ACQIV+S GD NVLQ++ASEG F KK K KKQ Sbjct: 213 GSDYSPGVHGLGPESACQIVKSIGDSNVLQKIASEGLPFAKKIKTSKKQ 261 Score = 54.7 bits (130), Expect(2) = 3e-22 Identities = 23/28 (82%), Positives = 27/28 (96%) Frame = -3 Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDL 233 ESLCDGCF++DSDVFLFGA+T+YRDI L Sbjct: 154 ESLCDGCFSSDSDVFLFGARTVYRDICL 181 >ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max] Length = 588 Score = 65.9 bits (159), Expect(2) = 2e-19 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = -1 Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKGL 73 GSDY GVHG GPE+ACQIV+S GD +L++ ASEG +VKK KG+ Sbjct: 215 GSDYYQGVHGLGPESACQIVKSIGDKYILKKFASEGLGWVKKRKGI 260 Score = 54.3 bits (129), Expect(2) = 2e-19 Identities = 22/28 (78%), Positives = 27/28 (96%) Frame = -3 Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDL 233 ESLCDGCF++DSD+FLFGA+T+YRDI L Sbjct: 155 ESLCDGCFSSDSDIFLFGARTVYRDICL 182 >ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula] gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like protein [Medicago truncatula] Length = 571 Score = 63.2 bits (152), Expect(2) = 2e-18 Identities = 29/45 (64%), Positives = 35/45 (77%) Frame = -1 Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKG 76 GSDY GVHG GP++ACQIV+S GD VL++ ASEG +VKK KG Sbjct: 213 GSDYYPGVHGLGPDSACQIVKSIGDKFVLKKFASEGLGWVKKRKG 257 Score = 54.3 bits (129), Expect(2) = 2e-18 Identities = 22/28 (78%), Positives = 27/28 (96%) Frame = -3 Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDL 233 ESLCDGCF++DSD+FLFGA+T+YRDI L Sbjct: 153 ESLCDGCFSSDSDIFLFGARTVYRDICL 180