BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013688
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...    82   6e-25
ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm...    80   1e-23
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-22
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...    66   2e-19
ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago...    63   2e-18

>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
           gi|297741051|emb|CBI31782.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score = 82.4 bits (202), Expect(2) = 6e-25
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -1

Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKGLKKQGEVRNCDANKE 31
           GSDYS GVHGFGPE+ACQIV+S G+  VL+++A EG +F KK+KG +KQG+V  C+ +KE
Sbjct: 213 GSDYSQGVHGFGPESACQIVKSVGEEVVLKKIALEGISFAKKSKGSRKQGQVLKCN-DKE 271

Query: 30  N 28
           N
Sbjct: 272 N 272



 Score = 56.6 bits (135), Expect(2) = 6e-25
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -3

Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDLDYTG 221
           ESLCDGCFT+DSDVFLFGA+T+YRDI L   G
Sbjct: 153 ESLCDGCFTSDSDVFLFGARTVYRDICLGEGG 184


>ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549920|gb|EEF51407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score = 80.1 bits (196), Expect(2) = 1e-23
 Identities = 36/54 (66%), Positives = 44/54 (81%)
 Frame = -1

Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKGLKKQGEVRN 49
           GSDYS GV G GPE+ACQIV+S GDHNVLQQ+AS G +F KKTK  KKQ ++++
Sbjct: 214 GSDYSQGVRGLGPESACQIVKSVGDHNVLQQIASGGLSFAKKTKASKKQTQLKS 267



 Score = 54.7 bits (130), Expect(2) = 1e-23
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDL 233
           ESLCDGCF++DSDVFLFGA+T+YRDI L
Sbjct: 154 ESLCDGCFSSDSDVFLFGARTVYRDICL 181


>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 75.1 bits (183), Expect(2) = 3e-22
 Identities = 35/49 (71%), Positives = 39/49 (79%)
 Frame = -1

Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKGLKKQ 64
           GSDYS GVHG GPE+ACQIV+S GD NVLQ++ASEG  F KK K  KKQ
Sbjct: 213 GSDYSPGVHGLGPESACQIVKSIGDSNVLQKIASEGLPFAKKIKTSKKQ 261



 Score = 54.7 bits (130), Expect(2) = 3e-22
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDL 233
           ESLCDGCF++DSDVFLFGA+T+YRDI L
Sbjct: 154 ESLCDGCFSSDSDVFLFGARTVYRDICL 181


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score = 65.9 bits (159), Expect(2) = 2e-19
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -1

Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKGL 73
           GSDY  GVHG GPE+ACQIV+S GD  +L++ ASEG  +VKK KG+
Sbjct: 215 GSDYYQGVHGLGPESACQIVKSIGDKYILKKFASEGLGWVKKRKGI 260



 Score = 54.3 bits (129), Expect(2) = 2e-19
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = -3

Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDL 233
           ESLCDGCF++DSD+FLFGA+T+YRDI L
Sbjct: 155 ESLCDGCFSSDSDIFLFGARTVYRDICL 182


>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 571

 Score = 63.2 bits (152), Expect(2) = 2e-18
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -1

Query: 210 GSDYSHGVHGFGPETACQIVRSFGDHNVLQQVASEGFAFVKKTKG 76
           GSDY  GVHG GP++ACQIV+S GD  VL++ ASEG  +VKK KG
Sbjct: 213 GSDYYPGVHGLGPDSACQIVKSIGDKFVLKKFASEGLGWVKKRKG 257



 Score = 54.3 bits (129), Expect(2) = 2e-18
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = -3

Query: 316 ESLCDGCFTADSDVFLFGAKTIYRDIDL 233
           ESLCDGCF++DSD+FLFGA+T+YRDI L
Sbjct: 153 ESLCDGCFSSDSDIFLFGARTVYRDICL 180