BLASTX nr result

ID: Coptis24_contig00013685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013685
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274867.1| PREDICTED: uncharacterized protein LOC100262...   150   5e-34
ref|NP_001237432.1| uncharacterized protein LOC100306606 [Glycin...   149   1e-33
ref|XP_004146236.1| PREDICTED: uncharacterized protein LOC101219...   147   4e-33
ref|NP_001235993.1| uncharacterized protein LOC100500296 [Glycin...   147   4e-33
ref|XP_003602304.1| F-box/WD repeat-containing protein [Medicago...   146   7e-33

>ref|XP_002274867.1| PREDICTED: uncharacterized protein LOC100262355 [Vitis vinifera]
           gi|302143947|emb|CBI23052.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  150 bits (378), Expect = 5e-34
 Identities = 85/163 (52%), Positives = 103/163 (63%), Gaps = 16/163 (9%)
 Frame = -1

Query: 782 MERLPTDVSHNIFRFLDHKNLATAQRVCRSWKVIASDNILWCKLFKERWGEAHASLYVPL 603
           MERLP D+   IF  LDH+NLAT+ +VCR WKV+ASDNILW  LFKERWGE  A+ Y P 
Sbjct: 1   MERLPGDLCLKIFYLLDHQNLATSLQVCRKWKVLASDNILWSNLFKERWGEDRAAFYAPT 60

Query: 602 DSRSWKDIYGMQHSCDRIVWGLKMIRKG-GDY----KGIIQRYLVS----RNATNVS--- 459
             +SWKD+Y  Q  CDR+  GLK+IR+G GDY    +G IQ +L S    + ATN S   
Sbjct: 61  GLKSWKDVYEAQDRCDRVGLGLKIIREGVGDYYLVHQGEIQHHLGSKRQRKGATNCSFSS 120

Query: 458 ----NGRAQSNLKRPYSGILGDILFFIGDSEVPSSSTKQNPVL 342
                G   SN + P  GIL  ILFFIGD EV S+  K+  +L
Sbjct: 121 ETGFIGEGCSNGEEPCLGILDKILFFIGDLEVASTDAKRGRIL 163


>ref|NP_001237432.1| uncharacterized protein LOC100306606 [Glycine max]
           gi|255629049|gb|ACU14869.1| unknown [Glycine max]
          Length = 165

 Score =  149 bits (375), Expect = 1e-33
 Identities = 80/165 (48%), Positives = 105/165 (63%), Gaps = 18/165 (10%)
 Frame = -1

Query: 782 MERLPTDVSHNIFRFLDHKNLATAQRVCRSWKVIASDNILWCKLFKERWGEAHASLYVPL 603
           MERLP ++   IF  LD+++LA AQ+VCR WK++AS+N LW  LFKERWGE HA+ Y P+
Sbjct: 1   MERLPLEICMKIFYLLDYQHLAVAQQVCRKWKLVASENALWSDLFKERWGEDHAAFYAPV 60

Query: 602 DSRSWKDIYGMQHSCDRIVWGLKMIRKGGDY----KGIIQRYLVSR-------------- 477
            S+SWKD+Y +Q  CDRI  GLK+IR+G DY    +G IQR+L SR              
Sbjct: 61  GSKSWKDVYEVQDLCDRIGVGLKIIREGIDYYLIHQGEIQRHLGSRKNHEKEIGHCSNTL 120

Query: 476 NATNVSNGRAQSNLKRPYSGILGDILFFIGDSEVPSSSTKQNPVL 342
           N+ +  NG      +R   GIL  ILFFIGD EV S+  K++ V+
Sbjct: 121 NSESNFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSRVI 165


>ref|XP_004146236.1| PREDICTED: uncharacterized protein LOC101219018 [Cucumis sativus]
           gi|449515969|ref|XP_004165020.1| PREDICTED:
           uncharacterized protein LOC101229696 [Cucumis sativus]
          Length = 163

 Score =  147 bits (370), Expect = 4e-33
 Identities = 79/160 (49%), Positives = 99/160 (61%), Gaps = 16/160 (10%)
 Frame = -1

Query: 782 MERLPTDVSHNIFRFLDHKNLATAQRVCRSWKVIASDNILWCKLFKERWGEAHASLYVPL 603
           ME+LPT++   IF FLD +NLATA +VCR W  +ASDNILW  LFKERWGE HA+ Y P+
Sbjct: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60

Query: 602 DSRSWKDIYGMQHSCDRIVWGLKMIRKGGDY----KGIIQRYLVSRNATNVSNGRAQSNL 435
            S+SWKD Y +Q  CDR   GL++IR+G DY    +G IQR+L SR   N        + 
Sbjct: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120

Query: 434 KRPY------------SGILGDILFFIGDSEVPSSSTKQN 351
           KR +             GIL  ILFFIGD EV S+  K++
Sbjct: 121 KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRS 160


>ref|NP_001235993.1| uncharacterized protein LOC100500296 [Glycine max]
           gi|255629960|gb|ACU15332.1| unknown [Glycine max]
          Length = 165

 Score =  147 bits (370), Expect = 4e-33
 Identities = 79/165 (47%), Positives = 103/165 (62%), Gaps = 18/165 (10%)
 Frame = -1

Query: 782 MERLPTDVSHNIFRFLDHKNLATAQRVCRSWKVIASDNILWCKLFKERWGEAHASLYVPL 603
           ME LP ++   IF  LD+++LA AQ+VCR WK++ASDN LW  LFKERWGE HA+ Y P+
Sbjct: 1   MEMLPLEICMKIFCLLDYQHLAVAQQVCRKWKLVASDNTLWSNLFKERWGEDHAAFYAPM 60

Query: 602 DSRSWKDIYGMQHSCDRIVWGLKMIRKGGDY----KGIIQRYLVSR-------------- 477
            S+SWKD+Y +Q  CDRI  G+K+IR+G DY    +G IQR+L SR              
Sbjct: 61  GSKSWKDVYEVQDRCDRIGLGMKIIREGIDYYLVHQGEIQRHLGSRKNHEKETGHNSHTL 120

Query: 476 NATNVSNGRAQSNLKRPYSGILGDILFFIGDSEVPSSSTKQNPVL 342
           N+    NG      +R   GIL  ILFFIGD EV S+  K++ V+
Sbjct: 121 NSEIDFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSRVI 165


>ref|XP_003602304.1| F-box/WD repeat-containing protein [Medicago truncatula]
           gi|355491352|gb|AES72555.1| F-box/WD repeat-containing
           protein [Medicago truncatula]
          Length = 162

 Score =  146 bits (368), Expect = 7e-33
 Identities = 76/162 (46%), Positives = 99/162 (61%), Gaps = 15/162 (9%)
 Frame = -1

Query: 782 MERLPTDVSHNIFRFLDHKNLATAQRVCRSWKVIASDNILWCKLFKERWGEAHASLYVPL 603
           ME LP ++   IF FLDH +LA +Q+VCR WK++ASDN LW  LFKERWG  HA+ Y PL
Sbjct: 1   METLPLEICMKIFCFLDHTHLAVSQQVCRKWKLMASDNALWSNLFKERWGGDHAAFYAPL 60

Query: 602 DSRSWKDIYGMQHSCDRIVWGLKMIRKGGDY----KGIIQRYLVSRNATNVSNGRAQSN- 438
            S+SWK++Y  Q  CDR+  GLK++R+G DY    +G +QRYL SR      +G   S+ 
Sbjct: 61  GSKSWKEVYEAQDRCDRVGLGLKIVREGSDYYLVHQGEVQRYLGSRKYRRQLSGHTSSSE 120

Query: 437 ----------LKRPYSGILGDILFFIGDSEVPSSSTKQNPVL 342
                      +R   GIL  ILFFIGD E  S   K++ V+
Sbjct: 121 TDFTGESSVAEERSCRGILDKILFFIGDLEAASVDAKRSRVI 162


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