BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013678
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]   464   e-128
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   462   e-128
ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat...   431   e-119
ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat...   431   e-119
ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat...   429   e-118

>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  464 bits (1194), Expect = e-128
 Identities = 221/284 (77%), Positives = 253/284 (89%)
 Frame = +1

Query: 1    VFDGMGLRDVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL 180
            VFD M  RDVVSWTSMISAYGMNG+GRDAV+LFS M + G+ PD I FVS+LSACSH+GL
Sbjct: 1352 VFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGL 1411

Query: 181  LDEGKHYFRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALL 360
            LDEG++YF+LMT E K+VPR+EH+ CMVDLLGRAG VDEAY FI QM ++P+E++WGALL
Sbjct: 1412 LDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALL 1471

Query: 361  SACQVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISK 540
            SAC+VYSNM +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW +VT VRS+MK++GI K
Sbjct: 1472 SACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKK 1531

Query: 541  MPGCSNVEMGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVPETNSALHDVEEED 720
            MPG SN E+  RVHTFL GDQSHPQ+K+IYEELDVLV KMKEAGYVPET+SALHDVEEED
Sbjct: 1532 MPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEED 1591

Query: 721  KECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAK 852
            KECHLAVHSEKLAI F I+NT PG+PIRITKNLRVCGDCH+AAK
Sbjct: 1592 KECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAK 1635


>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  462 bits (1188), Expect = e-128
 Identities = 220/284 (77%), Positives = 252/284 (88%)
 Frame = +1

Query: 1    VFDGMGLRDVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL 180
            VFD M  RDVVSWTSMISAYGMNG+GRDAV+LFS M + G+ PD I FVS+LSACSH+GL
Sbjct: 363  VFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGL 422

Query: 181  LDEGKHYFRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALL 360
            LDEG++YF+LMT E K+VPR+EH+ CMVDLLGRAG VDEAY FI QM ++P+E++WGALL
Sbjct: 423  LDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALL 482

Query: 361  SACQVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISK 540
            SAC+VYSNM +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW +VT VRS+MK++GI K
Sbjct: 483  SACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKK 542

Query: 541  MPGCSNVEMGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVPETNSALHDVEEED 720
            MPG SN E+  RVHTFL GDQSHPQ+K+IYEELDV V KMKEAGYVPET+SALHDVEEED
Sbjct: 543  MPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEED 602

Query: 721  KECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAK 852
            KECHLAVHSEKLAI F I+NT PG+PIRITKNLRVCGDCH+AAK
Sbjct: 603  KECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAK 646


>ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  431 bits (1109), Expect = e-119
 Identities = 206/284 (72%), Positives = 240/284 (84%)
 Frame = +1

Query: 1    VFDGMGLRDVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL 180
            VFD M LRDVVSWTSM+SAYG +GQG DAVALF+ ML+SG  PD I FVS+LSACSH+GL
Sbjct: 363  VFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGL 422

Query: 181  LDEGKHYFRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALL 360
            LD+G+HYFR+MT +Y +VPR+EH+ACMVDL GRAG V+EAY FI QM ++P+E++WGALL
Sbjct: 423  LDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALL 482

Query: 361  SACQVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISK 540
            SAC+V+S M +GLVAAD LFQL P+Q+GYYVLLSNIYAKAG W +V  VR  MK  GI K
Sbjct: 483  SACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKK 542

Query: 541  MPGCSNVEMGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVPETNSALHDVEEED 720
            +PG SNVE+  +VHTFL GDQ HPQ K IY ELDVLV KMKE GY+P+T SALHDVE ED
Sbjct: 543  VPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVED 602

Query: 721  KECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAK 852
            KECHLA+HSEKLAIVF I+NT+ GTPIRITKNLRVCGDCH+A K
Sbjct: 603  KECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIK 646



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/122 (27%), Positives = 62/122 (50%)
 Frame = +1

Query: 1   VFDGMGLRDVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL 180
           +F+ M  ++++SW  MI+ Y  N    +AV+LF  M E G+ PD +   S+L AC     
Sbjct: 262 MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSA 321

Query: 181 LDEGKHYFRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALL 360
           L  G+   + + +   + P L     ++D+  + G ++EA     +M ++     W +++
Sbjct: 322 LFLGRRLHKYIEKG-NLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVS-WTSMM 379

Query: 361 SA 366
           SA
Sbjct: 380 SA 381


>ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  431 bits (1109), Expect = e-119
 Identities = 206/284 (72%), Positives = 240/284 (84%)
 Frame = +1

Query: 1    VFDGMGLRDVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL 180
            VFD M LRDVVSWTSM+SAYG +GQG DAVALF+ ML+SG  PD I FVS+LSACSH+GL
Sbjct: 363  VFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGL 422

Query: 181  LDEGKHYFRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALL 360
            LD+G+HYFR+MT +Y +VPR+EH+ACMVDL GRAG V+EAY FI QM ++P+E++WGALL
Sbjct: 423  LDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALL 482

Query: 361  SACQVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISK 540
            SAC+V+S M +GLVAAD LFQL P+Q+GYYVLLSNIYAKAG W +V  VR  MK  GI K
Sbjct: 483  SACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKK 542

Query: 541  MPGCSNVEMGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVPETNSALHDVEEED 720
            +PG SNVE+  +VHTFL GDQ HPQ K IY ELDVLV KMKE GY+P+T SALHDVE ED
Sbjct: 543  VPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVED 602

Query: 721  KECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAK 852
            KECHLA+HSEKLAIVF I+NT+ GTPIRITKNLRVCGDCH+A K
Sbjct: 603  KECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIK 646



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 33/122 (27%), Positives = 62/122 (50%)
 Frame = +1

Query: 1   VFDGMGLRDVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL 180
           +F+ M  ++++SW  MI+ Y  N    +AV+LF  M E G+ PD +   S+L AC     
Sbjct: 262 MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSA 321

Query: 181 LDEGKHYFRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALL 360
           L  G+   + + +   + P L     ++D+  + G ++EA     +M ++     W +++
Sbjct: 322 LFLGRRLHKYIEKG-NLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVS-WTSMM 379

Query: 361 SA 366
           SA
Sbjct: 380 SA 381


>ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Glycine max]
          Length = 673

 Score =  429 bits (1102), Expect = e-118
 Identities = 207/284 (72%), Positives = 242/284 (85%)
 Frame = +1

Query: 1    VFDGMGLRDVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL 180
            VFD M  RDV SWTS+ISAYGM GQG +AVALF++M  SG  PD I FV+ILSACSHSGL
Sbjct: 359  VFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGL 418

Query: 181  LDEGKHYFRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALL 360
            L+EGK YF+ MT +YK+ P +EH+AC+VDLLGR+G VDEAY  I QM +KP+E++WGALL
Sbjct: 419  LNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALL 478

Query: 361  SACQVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISK 540
            S+C+VYSNM +G++AAD L QL PE++GYYVLLSNIYAKAGRW EVTA+RS+MK R I K
Sbjct: 479  SSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRK 538

Query: 541  MPGCSNVEMGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVPETNSALHDVEEED 720
            MPG SNVE+  +VHTFL GD  HPQ+KEIYEEL VLV KMKE GYVP+T+SALHDVEEED
Sbjct: 539  MPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEED 598

Query: 721  KECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAK 852
            KECHLAVHSEKLAIVF I+NT+  +PIRITKNLRVCGDCH+AAK
Sbjct: 599  KECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHIAAK 641