BLASTX nr result

ID: Coptis24_contig00013677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013677
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ27522.1| beclin 1 protein [Malus x domestica]                  186   1e-51
ref|XP_002277370.1| PREDICTED: beclin 1 protein [Vitis vinifera]...   182   2e-50
emb|CAJ27525.1| beclin 1 protein [Vitis vinifera]                     182   2e-50
emb|CAJ27520.1| beclin 1 protein [Gossypium raimondii]                183   3e-50
ref|XP_002302626.1| predicted protein [Populus trichocarpa] gi|2...   181   3e-50

>emb|CAJ27522.1| beclin 1 protein [Malus x domestica]
          Length = 505

 Score =  186 bits (472), Expect(2) = 1e-51
 Identities = 88/95 (92%), Positives = 90/95 (94%)
 Frame = -1

Query: 340 VSQLHLELLKRTNVLNDAFPIYHDGEFGTINNFRLGRLPKILVEWDEINAAWGQACLLLH 161
           VSQ HLELLKRTNVLNDAFPI+HDGEFGTINNFRLGRLPKI VEWDEINAAWGQACLLLH
Sbjct: 282 VSQAHLELLKRTNVLNDAFPIWHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLH 341

Query: 160 TMAQYFRPKFPYRI*ILPMGSYPRIMDSNNNTYEL 56
           TM QYFRPKF YRI ILPMGSYPRIMD+NNNTYEL
Sbjct: 342 TMCQYFRPKFQYRIKILPMGSYPRIMDNNNNTYEL 376



 Score = 42.0 bits (97), Expect(2) = 1e-51
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -3

Query: 56  VFGPVNLFWSTRYDKAMT 3
           +FGPVNLFWSTRYDKAMT
Sbjct: 376 LFGPVNLFWSTRYDKAMT 393


>ref|XP_002277370.1| PREDICTED: beclin 1 protein [Vitis vinifera]
           gi|297745431|emb|CBI40511.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score =  182 bits (462), Expect(2) = 2e-50
 Identities = 86/95 (90%), Positives = 89/95 (93%)
 Frame = -1

Query: 340 VSQLHLELLKRTNVLNDAFPIYHDGEFGTINNFRLGRLPKILVEWDEINAAWGQACLLLH 161
           VSQ HLELLKRTNVLNDAFPI+HDGEFGTINNFRLGRLPKI VEWDEINAAWGQACLLLH
Sbjct: 297 VSQAHLELLKRTNVLNDAFPIWHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLH 356

Query: 160 TMAQYFRPKFPYRI*ILPMGSYPRIMDSNNNTYEL 56
           TM QYFRPKF YRI I+PMGSYPRI DSNN+TYEL
Sbjct: 357 TMVQYFRPKFQYRIKIIPMGSYPRITDSNNSTYEL 391



 Score = 42.0 bits (97), Expect(2) = 2e-50
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -3

Query: 56  VFGPVNLFWSTRYDKAMT 3
           +FGPVNLFWSTRYDKAMT
Sbjct: 391 LFGPVNLFWSTRYDKAMT 408


>emb|CAJ27525.1| beclin 1 protein [Vitis vinifera]
          Length = 479

 Score =  182 bits (462), Expect(2) = 2e-50
 Identities = 86/95 (90%), Positives = 89/95 (93%)
 Frame = -1

Query: 340 VSQLHLELLKRTNVLNDAFPIYHDGEFGTINNFRLGRLPKILVEWDEINAAWGQACLLLH 161
           VSQ HLELLKRTNVLNDAFPI+HDGEFGTINNFRLGRLPKI VEWDEINAAWGQACLLLH
Sbjct: 297 VSQAHLELLKRTNVLNDAFPIWHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLH 356

Query: 160 TMAQYFRPKFPYRI*ILPMGSYPRIMDSNNNTYEL 56
           TM QYFRPKF YRI I+PMGSYPRI DSNN+TYEL
Sbjct: 357 TMVQYFRPKFQYRIKIIPMGSYPRITDSNNSTYEL 391



 Score = 42.0 bits (97), Expect(2) = 2e-50
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -3

Query: 56  VFGPVNLFWSTRYDKAMT 3
           +FGPVNLFWSTRYDKAMT
Sbjct: 391 LFGPVNLFWSTRYDKAMT 408


>emb|CAJ27520.1| beclin 1 protein [Gossypium raimondii]
          Length = 511

 Score =  183 bits (465), Expect(2) = 3e-50
 Identities = 86/95 (90%), Positives = 90/95 (94%)
 Frame = -1

Query: 340 VSQLHLELLKRTNVLNDAFPIYHDGEFGTINNFRLGRLPKILVEWDEINAAWGQACLLLH 161
           VSQ HLELLKRTNVLNDAFPI++DGEFGTINNFRLGRLPKI VEWDEINAAWGQACLLLH
Sbjct: 291 VSQAHLELLKRTNVLNDAFPIWYDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLH 350

Query: 160 TMAQYFRPKFPYRI*ILPMGSYPRIMDSNNNTYEL 56
           TM QYFRPKFPYRI I+P+GSYPRIM SNNNTYEL
Sbjct: 351 TMCQYFRPKFPYRIKIIPLGSYPRIMGSNNNTYEL 385



 Score = 40.4 bits (93), Expect(2) = 3e-50
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -3

Query: 56  VFGPVNLFWSTRYDKAMT 3
           +FGPVNLFWSTR+DKAMT
Sbjct: 385 LFGPVNLFWSTRFDKAMT 402


>ref|XP_002302626.1| predicted protein [Populus trichocarpa] gi|222844352|gb|EEE81899.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  181 bits (460), Expect(2) = 3e-50
 Identities = 85/95 (89%), Positives = 89/95 (93%)
 Frame = -1

Query: 340 VSQLHLELLKRTNVLNDAFPIYHDGEFGTINNFRLGRLPKILVEWDEINAAWGQACLLLH 161
           VSQ HLELLK+TNVLNDAFPI+HDGEFGTINNFRLGRLPKI VEWDEINAAWGQACLLLH
Sbjct: 293 VSQAHLELLKKTNVLNDAFPIHHDGEFGTINNFRLGRLPKIAVEWDEINAAWGQACLLLH 352

Query: 160 TMAQYFRPKFPYRI*ILPMGSYPRIMDSNNNTYEL 56
           TM QYF+PKF YRI ILPMGSYPRIMDS+NN YEL
Sbjct: 353 TMCQYFKPKFQYRIKILPMGSYPRIMDSSNNIYEL 387



 Score = 42.0 bits (97), Expect(2) = 3e-50
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -3

Query: 56  VFGPVNLFWSTRYDKAMT 3
           +FGPVNLFWSTRYDKAMT
Sbjct: 387 LFGPVNLFWSTRYDKAMT 404


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