BLASTX nr result
ID: Coptis24_contig00013639
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013639
(1710 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 141 6e-31
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 135 3e-29
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 133 2e-28
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2... 132 4e-28
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 125 3e-26
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 141 bits (355), Expect = 6e-31
Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Frame = +2
Query: 194 KDLEMGRQKIGEGGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLC 373
K+ + G + IG LP+ ++ ILSFL T+ AV TS+LS +W +LW TN+
Sbjct: 19 KETDSGEKSIGN-------LPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF- 70
Query: 374 DQLLFSDSMNEELVHKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLK 553
+ + +FM+FV+RVL L I +F LS + D SR+ WIS +
Sbjct: 71 --------FGLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVN 122
Query: 554 RKVQVLILNLCVGLEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIE 733
R V+ L L L V PH LFN E+LT +++ +LK+P+SIS S LK+L+L ++
Sbjct: 123 RNVKDLYLELRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEV- 181
Query: 734 VFCDQAIQHVSLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKD-SFHDCE 910
+F D S P L E+ C W+ + ++ISAP L+ L I + + S C
Sbjct: 182 IFTDDHSTQQLFSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCH 241
Query: 911 IKVYAESLVSLELDCNMAYELSLYNLFSLFNASIDICST----RKIGQRVDKLLKAICDV 1078
++++ L + ++ + LY S+ I I S R+ R KLL+ I
Sbjct: 242 VRIFGTHLADFTIIGTLSNDYCLYE-SSVVETCISIFSAADKPRQTAYRASKLLEGISSA 300
Query: 1079 KDLRLSDDSIEV 1114
+ L L+ + ++V
Sbjct: 301 QSLCLTTNVVDV 312
>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
Full=F-box/LRR-repeat protein At4g14096
gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
thaliana] gi|22136112|gb|AAM91134.1| unknown protein
[Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
F-box/LRR-repeat protein [Arabidopsis thaliana]
Length = 468
Score = 135 bits (340), Expect = 3e-29
Identities = 108/304 (35%), Positives = 159/304 (52%), Gaps = 11/304 (3%)
Frame = +2
Query: 236 DRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNEELV 415
D IS LPE I ILSFLPTK A TSVLS +WRYL+ FV N+DL D+ ++ + NE V
Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDL-DESVYLNPENETEV 66
Query: 416 HKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNLCVGL 595
+ FM+FV+RVL L +HKF L ++ RI WI+NVL+R V L L++ +
Sbjct: 67 SSS-FMDFVDRVLALQGNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMET 125
Query: 596 EPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQHVSL-- 769
E VFP +F ++L +KL +L+ + +LK L++D F I L
Sbjct: 126 E-FVFPSEMFLSKTLVRLKLMLYPLLEF-EDVYLPKLKTLYIDSC-YFEKYGIGLTKLLS 182
Query: 770 SCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKDSFHDCEIKVYAESLVSLEL 949
CPILE++V + W ++S P LKRL + +D F + + +LV L+
Sbjct: 183 GCPILEDLVLDDIPWCTWDFASVSVPTLKRLTF--STQVRDEFPK-SVSIDTPNLVYLKF 239
Query: 950 DCNMAYELSLYNLFSLFNASIDI---------CSTRKIGQRVDKLLKAICDVKDLRLSDD 1102
+A + N SL A ID+ +G D +++ IC+VK L LS +
Sbjct: 240 TDTVAGKYPKVNFDSLVEAHIDLRLLQGHQGYGENDMVGNATDFIMR-ICNVKTLYLSSN 298
Query: 1103 SIEV 1114
+++V
Sbjct: 299 TLQV 302
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 133 bits (334), Expect = 2e-28
Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 6/270 (2%)
Frame = +2
Query: 227 EGGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNE 406
E D IS LP+ ++ ILSFLPTK+AVGTS+LS RWRYLW V +D D+L + S
Sbjct: 7 ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLV 66
Query: 407 ELVHKTI-FMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNL 583
EL + I F NFV+ VL ++ I KF L + + + +WI L+R+VQ L L+L
Sbjct: 67 ELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRD-NNLDSVYSWICIALERRVQELDLHL 125
Query: 584 CVGLEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQHV 763
+ + P F ++L ++KL L +P ++ LK LHL +E D +IQ +
Sbjct: 126 LIDWR-VELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKL 184
Query: 764 SLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILE-----RKDSFHDCEIKVYAE 928
CP+LEE+V V+N+S P LK L I + + D ++ V A
Sbjct: 185 LSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAP 244
Query: 929 SLVSLELDCNMAYELSLYNLFSLFNASIDI 1018
+L L + ++ + + +L SL A ID+
Sbjct: 245 NLEYLSITDYLSKDYFVKDLPSLVKAFIDV 274
>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
predicted protein [Populus trichocarpa]
Length = 420
Score = 132 bits (331), Expect = 4e-28
Identities = 100/303 (33%), Positives = 151/303 (49%), Gaps = 8/303 (2%)
Frame = +2
Query: 230 GGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNEE 409
GG I+ LP+ ++ ILSFL TK AV TS+LS +W +LW ++N++ Q F
Sbjct: 36 GGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEF-HQCYFK------ 88
Query: 410 LVHKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNLCV 589
+ IFMN VERVLLL D+ I KF LS + D +R W+S + R V+ L +N
Sbjct: 89 -AKRKIFMNSVERVLLLRDSSNIEKFTLSC-GIDDATRTRTWVSAAVNRNVKELCVNFYE 146
Query: 590 G--LEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQHV 763
G E V P LF +LT +K+ + VL++ +SIS LK+L L + VF D+
Sbjct: 147 GGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHV-VFPDEDSTQQ 205
Query: 764 SLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKD--SFHDCEIKVYAESLV 937
L+ LE++ W +K I ISAP L+ L I + + R D C + ++ +L
Sbjct: 206 ILNLRTLEKLKISYYDWKNLKAITISAPKLRSLDICE-MHRNDLRGSDACHVMIFGTALT 264
Query: 938 SLELDCNMAYELSLYNLFSLFNASIDICS----TRKIGQRVDKLLKAICDVKDLRLSDDS 1105
+ L+ SL A + +R+I R K + + VK L L+ D
Sbjct: 265 FFSFSGGFWDDYCLFKSSSLVEAYFHVYGCYERSREIAHRAYKHIVGLSTVKHLTLTPDV 324
Query: 1106 IEV 1114
+++
Sbjct: 325 LKI 327
>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
[Arabidopsis thaliana]
Length = 443
Score = 125 bits (314), Expect = 3e-26
Identities = 102/310 (32%), Positives = 156/310 (50%), Gaps = 17/310 (5%)
Frame = +2
Query: 236 DRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNEELV 415
D IS LP+ I ILSFLPTK A TSVLS +WRYL+ FV N+DL D + + E+
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEI- 66
Query: 416 HKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNLCVGL 595
T FM+FV+RVL L +HKF L +D RI WI+NVL+R V L L+L +
Sbjct: 67 -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLES 125
Query: 596 EPLVFPHTLFNWESLTIIKLCADSVLKVPA-SISFSRLKVLHLDDIEVFCDQAIQHVSL- 769
E + P ++ ++L +KL + + +LK L+++ F + + L
Sbjct: 126 E-FLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATH-FEEHGVGLTKLL 183
Query: 770 -SCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKDSFHDCEIKVYAESLVSLE 946
CP+LE++V + W ++S P LKRL + +D F + + +LV L+
Sbjct: 184 SGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRF--SWQERDEFPK-SVLLDTPNLVYLK 240
Query: 947 LDCNMAYELSLYNLFSLFNASIDICSTR--------------KIGQRVDKLLKAICDVKD 1084
+A + NL SL A ID+ + +G D +++ IC+VK
Sbjct: 241 FTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMR-ICNVKT 299
Query: 1085 LRLSDDSIEV 1114
L LS ++++V
Sbjct: 300 LYLSANTLQV 309