BLASTX nr result
ID: Coptis24_contig00013639
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013639 (1710 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 141 6e-31 ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 135 3e-29 emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 133 2e-28 ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2... 132 4e-28 ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 125 3e-26 >ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1| predicted protein [Populus trichocarpa] Length = 460 Score = 141 bits (355), Expect = 6e-31 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 5/312 (1%) Frame = +2 Query: 194 KDLEMGRQKIGEGGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLC 373 K+ + G + IG LP+ ++ ILSFL T+ AV TS+LS +W +LW TN+ Sbjct: 19 KETDSGEKSIGN-------LPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF- 70 Query: 374 DQLLFSDSMNEELVHKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLK 553 + + +FM+FV+RVL L I +F LS + D SR+ WIS + Sbjct: 71 --------FGLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVN 122 Query: 554 RKVQVLILNLCVGLEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIE 733 R V+ L L L V PH LFN E+LT +++ +LK+P+SIS S LK+L+L ++ Sbjct: 123 RNVKDLYLELRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEV- 181 Query: 734 VFCDQAIQHVSLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKD-SFHDCE 910 +F D S P L E+ C W+ + ++ISAP L+ L I + + S C Sbjct: 182 IFTDDHSTQQLFSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCH 241 Query: 911 IKVYAESLVSLELDCNMAYELSLYNLFSLFNASIDICST----RKIGQRVDKLLKAICDV 1078 ++++ L + ++ + LY S+ I I S R+ R KLL+ I Sbjct: 242 VRIFGTHLADFTIIGTLSNDYCLYE-SSVVETCISIFSAADKPRQTAYRASKLLEGISSA 300 Query: 1079 KDLRLSDDSIEV 1114 + L L+ + ++V Sbjct: 301 QSLCLTTNVVDV 312 >ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName: Full=F-box/LRR-repeat protein At4g14096 gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis thaliana] gi|22136112|gb|AAM91134.1| unknown protein [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 468 Score = 135 bits (340), Expect = 3e-29 Identities = 108/304 (35%), Positives = 159/304 (52%), Gaps = 11/304 (3%) Frame = +2 Query: 236 DRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNEELV 415 D IS LPE I ILSFLPTK A TSVLS +WRYL+ FV N+DL D+ ++ + NE V Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDL-DESVYLNPENETEV 66 Query: 416 HKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNLCVGL 595 + FM+FV+RVL L +HKF L ++ RI WI+NVL+R V L L++ + Sbjct: 67 SSS-FMDFVDRVLALQGNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMET 125 Query: 596 EPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQHVSL-- 769 E VFP +F ++L +KL +L+ + +LK L++D F I L Sbjct: 126 E-FVFPSEMFLSKTLVRLKLMLYPLLEF-EDVYLPKLKTLYIDSC-YFEKYGIGLTKLLS 182 Query: 770 SCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKDSFHDCEIKVYAESLVSLEL 949 CPILE++V + W ++S P LKRL + +D F + + +LV L+ Sbjct: 183 GCPILEDLVLDDIPWCTWDFASVSVPTLKRLTF--STQVRDEFPK-SVSIDTPNLVYLKF 239 Query: 950 DCNMAYELSLYNLFSLFNASIDI---------CSTRKIGQRVDKLLKAICDVKDLRLSDD 1102 +A + N SL A ID+ +G D +++ IC+VK L LS + Sbjct: 240 TDTVAGKYPKVNFDSLVEAHIDLRLLQGHQGYGENDMVGNATDFIMR-ICNVKTLYLSSN 298 Query: 1103 SIEV 1114 +++V Sbjct: 299 TLQV 302 >emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] Length = 607 Score = 133 bits (334), Expect = 2e-28 Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 6/270 (2%) Frame = +2 Query: 227 EGGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNE 406 E D IS LP+ ++ ILSFLPTK+AVGTS+LS RWRYLW V +D D+L + S Sbjct: 7 ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLV 66 Query: 407 ELVHKTI-FMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNL 583 EL + I F NFV+ VL ++ I KF L + + + +WI L+R+VQ L L+L Sbjct: 67 ELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRD-NNLDSVYSWICIALERRVQELDLHL 125 Query: 584 CVGLEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQHV 763 + + P F ++L ++KL L +P ++ LK LHL +E D +IQ + Sbjct: 126 LIDWR-VELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKL 184 Query: 764 SLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILE-----RKDSFHDCEIKVYAE 928 CP+LEE+V V+N+S P LK L I + + D ++ V A Sbjct: 185 LSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAP 244 Query: 929 SLVSLELDCNMAYELSLYNLFSLFNASIDI 1018 +L L + ++ + + +L SL A ID+ Sbjct: 245 NLEYLSITDYLSKDYFVKDLPSLVKAFIDV 274 >ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1| predicted protein [Populus trichocarpa] Length = 420 Score = 132 bits (331), Expect = 4e-28 Identities = 100/303 (33%), Positives = 151/303 (49%), Gaps = 8/303 (2%) Frame = +2 Query: 230 GGDRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNEE 409 GG I+ LP+ ++ ILSFL TK AV TS+LS +W +LW ++N++ Q F Sbjct: 36 GGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEF-HQCYFK------ 88 Query: 410 LVHKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNLCV 589 + IFMN VERVLLL D+ I KF LS + D +R W+S + R V+ L +N Sbjct: 89 -AKRKIFMNSVERVLLLRDSSNIEKFTLSC-GIDDATRTRTWVSAAVNRNVKELCVNFYE 146 Query: 590 G--LEPLVFPHTLFNWESLTIIKLCADSVLKVPASISFSRLKVLHLDDIEVFCDQAIQHV 763 G E V P LF +LT +K+ + VL++ +SIS LK+L L + VF D+ Sbjct: 147 GGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHV-VFPDEDSTQQ 205 Query: 764 SLSCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKD--SFHDCEIKVYAESLV 937 L+ LE++ W +K I ISAP L+ L I + + R D C + ++ +L Sbjct: 206 ILNLRTLEKLKISYYDWKNLKAITISAPKLRSLDICE-MHRNDLRGSDACHVMIFGTALT 264 Query: 938 SLELDCNMAYELSLYNLFSLFNASIDICS----TRKIGQRVDKLLKAICDVKDLRLSDDS 1105 + L+ SL A + +R+I R K + + VK L L+ D Sbjct: 265 FFSFSGGFWDDYCLFKSSSLVEAYFHVYGCYERSREIAHRAYKHIVGLSTVKHLTLTPDV 324 Query: 1106 IEV 1114 +++ Sbjct: 325 LKI 327 >ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 443 Score = 125 bits (314), Expect = 3e-26 Identities = 102/310 (32%), Positives = 156/310 (50%), Gaps = 17/310 (5%) Frame = +2 Query: 236 DRISFLPEGIIHCILSFLPTKYAVGTSVLSTRWRYLWTFVTNIDLCDQLLFSDSMNEELV 415 D IS LP+ I ILSFLPTK A TSVLS +WRYL+ FV N+DL D + + E+ Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEI- 66 Query: 416 HKTIFMNFVERVLLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRKVQVLILNLCVGL 595 T FM+FV+RVL L +HKF L +D RI WI+NVL+R V L L+L + Sbjct: 67 -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLES 125 Query: 596 EPLVFPHTLFNWESLTIIKLCADSVLKVPA-SISFSRLKVLHLDDIEVFCDQAIQHVSL- 769 E + P ++ ++L +KL + + +LK L+++ F + + L Sbjct: 126 E-FLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATH-FEEHGVGLTKLL 183 Query: 770 -SCPILEEVVFLNCRWLKMKVINISAPVLKRLVIVDILERKDSFHDCEIKVYAESLVSLE 946 CP+LE++V + W ++S P LKRL + +D F + + +LV L+ Sbjct: 184 SGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRF--SWQERDEFPK-SVLLDTPNLVYLK 240 Query: 947 LDCNMAYELSLYNLFSLFNASIDICSTR--------------KIGQRVDKLLKAICDVKD 1084 +A + NL SL A ID+ + +G D +++ IC+VK Sbjct: 241 FTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMR-ICNVKT 299 Query: 1085 LRLSDDSIEV 1114 L LS ++++V Sbjct: 300 LYLSANTLQV 309