BLASTX nr result
ID: Coptis24_contig00013634
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013634
(1816 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]... 294 6e-77
ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|2... 288 3e-75
ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinif... 248 5e-63
gb|ABR17868.1| unknown [Picea sitchensis] 231 5e-58
emb|CBI26735.3| unnamed protein product [Vitis vinifera] 228 4e-57
>ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]
gi|223531527|gb|EEF33358.1| Protein FRIGIDA, putative
[Ricinus communis]
Length = 491
Score = 294 bits (752), Expect = 6e-77
Identities = 189/531 (35%), Positives = 275/531 (51%), Gaps = 11/531 (2%)
Frame = +3
Query: 39 TMKSILSSIESIDTKKESLRKALEDLQXXXXXXXXFTLQWKDLEDHFDSIKQSIQERFQL 218
T+K+I S++ ID KK++L++A +DLQ F+L W DL+ HF S++ ++ RF
Sbjct: 11 TLKTIESALNLIDIKKQTLKRAYDDLQSHSSLLSSFSLSWSDLDSHFTSVQTALTRRFLR 70
Query: 219 LQSRDXXXXXXXXXXXXXXXXXXXXXTTHPELKKYCVNNDGIGLRTYILNNRKELVSIRD 398
LQS T L +C DG GLR YI + +E +IR
Sbjct: 71 LQST-------RPGPETVQPEPVQDNPTRKALVPFCEKMDGRGLRDYISEHSREREAIRA 123
Query: 399 ELKFALELASDPGKLVIDAMKGFYPQXXXXXXXXXXSSKGDKDGXXXXXXXXXXXXXXXX 578
EL + L SDPG++++DAM+GFY SKGD+D
Sbjct: 124 ELVGLMGLVSDPGEMILDAMEGFY----------LSKSKGDRD-VDLYRLRKSCLDLLEV 172
Query: 579 MSVVKDKGEEFSVQVKESAKKLGIEWKGKVSGGSDSPLEPLAFLQLLASYGLGSEFDS-S 755
+S +K K +FS +VK AK L EWK KVS DSP E L FL L+ ++ L FD +
Sbjct: 173 LSEIKPK-PKFSDEVKIKAKNLAFEWKEKVSLNGDSPSEALGFLNLIVAFELKDMFDDVN 231
Query: 756 EVLDLAVSIARRKQAIDLLRALRMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPV 935
E+L+ V IAR KQA L R + + DKI D +QKL +GKQL AVKF++ F L DKF P
Sbjct: 232 ELLNYFVVIARFKQATVLARDIGLGDKINDLVQKLIDSGKQLLAVKFIFEFGLTDKFQPA 291
Query: 936 PLLKDYFKQSKKVAQEIRNKGNHSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGIL 1115
PLL+D+ K+SK+ ++ + +SV++ NEA ++E+ A+K++++ I+EHNLE YP L
Sbjct: 292 PLLRDHLKESKEFTDKVCKEEKNSVKAQNEARSREVNALKSVLRYIDEHNLEFDYPHLDL 351
Query: 1116 DKRVEQLEKQKASKKRPAVGP----------TPADKKQQQQFGNKRPKPAETRXXXXXXX 1265
+KR+E LEKQKA +K A P KKQQQ G ++ K + +
Sbjct: 352 EKRIEMLEKQKADRKVAAPSPDNRPRQQPKKQQLSKKQQQHQGKQQAKKQQLK------- 404
Query: 1266 XXXXXHLQPMSSFVDRFPPYMSSSAQYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLA 1445
+ +P + + P P + G +A P YGLA
Sbjct: 405 ----GNKRPRMAML-----------------PGPAAVPISIAGPSSAGASAGP---YGLA 440
Query: 1446 TNPVSYGRHLSPSRSHLYSAESHLAAGLYDRSMGYGGHGMPPSHRSSFYPQ 1598
+ + + SP R+H YS+ SH+++ YDRS +GG+G PP + +YPQ
Sbjct: 441 GAGMCFPGNPSPVRAHPYSSNSHMSSSYYDRSAAFGGYGFPPQYCPGYYPQ 491
>ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|222844431|gb|EEE81978.1|
predicted protein [Populus trichocarpa]
Length = 539
Score = 288 bits (737), Expect = 3e-75
Identities = 194/565 (34%), Positives = 277/565 (49%), Gaps = 40/565 (7%)
Frame = +3
Query: 24 NPTPPTMKSILSSIESIDTKKESLRKALEDLQXXXXXXXX--FTLQWKDLEDHFDSIKQS 197
+P T+K+I ++++ IDTKK++L+KA +DLQ ++L W DL+ HF S++ +
Sbjct: 6 DPQITTLKTIEAALKLIDTKKDNLKKAYDDLQSLSSHLLSSSYSLSWADLDSHFSSVQDN 65
Query: 198 IQERFQLLQS--------------------------------RDXXXXXXXXXXXXXXXX 281
+ RF LLQS R
Sbjct: 66 LNGRFLLLQSSLESLDPVAPCHSSVGASEQESPASSNPRCLGRVDSEASRSELKPSTTLT 125
Query: 282 XXXXXTTHPELKKYCVNNDGIGLRTYILNNRKELVSIRDELKFALELASDPGKLVIDAMK 461
+ +L C D GLR Y+ N + IRD L A+ +A DPG V+DAM+
Sbjct: 126 SNTVDPSRSDLMSLCERMDVKGLRKYMKQNASKWGEIRDRLSGAMSVAPDPGSFVLDAME 185
Query: 462 GFYPQXXXXXXXXXXSSKGDKDGXXXXXXXXXXXXXXXXMSVVKDKGEEFSVQVKESAKK 641
GFY +SKGDKD ++ K+K S +V E AKK
Sbjct: 186 GFYSSKA--------NSKGDKDTELCRLRRTCLDLLE---ALAKNK-PTLSKEVNERAKK 233
Query: 642 LGIEWKGKVSGGSDSPLEPLAFLQLLASYGLGSEFDSSEVLDLAVSIARRKQAIDLLRAL 821
L +EWK KVS +SPLE L FL LL +Y L EFD E++D V +AR +QA+ L RA+
Sbjct: 234 LALEWKRKVSLNGESPLEALGFLHLLVAYNLEKEFDVGELVDYFVIVARFRQAVVLCRAV 293
Query: 822 RMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVAQEIRNKGN 1001
+ +K D IQKL +GKQ AVKF++ F LVDKF PVPLLK + K+SK++ +++ G
Sbjct: 294 DLGEKTADLIQKLIDSGKQFLAVKFIFEFGLVDKFQPVPLLKAHLKESKRLTKKVCQDGK 353
Query: 1002 HSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQKASKKRPAVGPT 1181
+S+ NEA ++E+ +K+ + I+E+ L S+YPR L KR+E LEKQKA+ P+
Sbjct: 354 NSINQQNEARSREVKTLKSALVLIDEYKLGSEYPRMDLKKRIEMLEKQKAAAASAVDEPS 413
Query: 1182 PADKKQQQQFGNKRPKPAET------RXXXXXXXXXXXXHLQPMSSFVDRFPPYMSSSAQ 1343
KKQQQ G+KRP+ + T HLQP S + ++
Sbjct: 414 HQPKKQQQA-GSKRPRTSATAVQNSNNGSNPVIPPFKQSHLQPAS--------LLLAAGP 464
Query: 1344 YGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSHLYSAESHLAA 1523
YG VG+ Y G YG A + G NP S + +H Y ESH+ +
Sbjct: 465 YGSVGSISPAILYAGPPAGPYGLAR---AGTGFPGNPRS-------ALAHQYFPESHVPS 514
Query: 1524 GLYDRSMGYGGHGMPPSHRSSFYPQ 1598
YDR+ YGG+ +P + +YPQ
Sbjct: 515 DHYDRAAAYGGYDLPLKYHPGYYPQ 539
>ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinifera]
Length = 533
Score = 248 bits (632), Expect = 5e-63
Identities = 173/571 (30%), Positives = 269/571 (47%), Gaps = 52/571 (9%)
Frame = +3
Query: 42 MKSILSSIESIDTKKESLRKALEDLQXXXXXXXXFTL------------------QWKDL 167
+K+I ++++ ID KKESLRKA EDL+ FTL Q++ L
Sbjct: 4 LKTISAALKLIDAKKESLRKAFEDLEAHSSSLSSFTLTWSAIDAHFSSIQSSLSRQFEIL 63
Query: 168 EDHFDSIKQSI------------------------------QERFQLLQSRDXXXXXXXX 257
E DS+ Q+ Q L ++
Sbjct: 64 ESRTDSVPQNDTLPTNNAVSLPAQSNAVSLPPQNNAVSLPPQNNAVSLPPQESAISRPTQ 123
Query: 258 XXXXXXXXXXXXXTTHPELKKYCVNNDGIGLRTYILNNRKELVSIRDELKFALELASDPG 437
+HP+L+ C D LR YI+++ + ++R EL A ++A DP
Sbjct: 124 NSAVSRPPQNNANPSHPQLRLLCSAMDAEALRRYIMDHPNDRETLRSELLDAFQVARDPA 183
Query: 438 KLVIDAMKGFYPQXXXXXXXXXXSSKGDKDGXXXXXXXXXXXXXXXXMSVVKDKGEEFSV 617
K+V+DA+ GF+P S ++DG ++ E
Sbjct: 184 KMVLDALTGFFP------------SNANEDGSSELHTMRRSCVFMLEQLMLFSP--EIGE 229
Query: 618 QVKESAKKLGIEWKGKVSGGSDSPLEPLAFLQLLASYGLGSEFDSSEVLDLAVSIARRKQ 797
V++ AK L EWKGKV G D+ L+P+ FL LLA+YGLGS++DS+E+L+L + + R ++
Sbjct: 230 DVRQRAKSLAQEWKGKVKVG-DNTLKPMGFLHLLAAYGLGSDYDSTELLELLIDVVRYRE 288
Query: 798 AIDLLRALRMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVA 977
L R L + DK+PD IQ L +GK AVKFV F+L KFP + +LKD + S+ VA
Sbjct: 289 VFGLCRGLNLVDKVPDLIQNLIGSGKPNLAVKFVLEFKLTHKFPLIAILKDIVESSRDVA 348
Query: 978 QEIRNKGNHSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQ---- 1145
+++R G HS+QS NEAT+KE++A+K + K I++++L ++YP L++R+++LE Q
Sbjct: 349 RKVRKDGKHSLQSQNEATSKEISALKLVTKYIKDYDLNNEYPGAPLEERIQKLESQMAAR 408
Query: 1146 KASKKRPAVGPTPADKKQQQQFGNKRPKPAETRXXXXXXXXXXXXHLQPMSSFVDRFPPY 1325
A+KKRPA+ P P K+Q++Q + A P P+
Sbjct: 409 TAAKKRPALAPAPRPKQQKKQKSKQAQTTATASPSVPSGAAGTSSTAAPFQQ------PH 462
Query: 1326 MSSSAQYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSHLYSA 1505
+ + GLV P P+MN + G YGFA P+ G +L P HL+
Sbjct: 463 LQAP---GLV--PDGPVPFMNPSAGLYGFAGVPMGFPG----------NLGPPMPHLHPM 507
Query: 1506 ESHLAAGLYDRSMGYGGHGMPPSHRSSFYPQ 1598
E L +GG+G+ + +++ Q
Sbjct: 508 EPQL-----PMPFAHGGYGLQSLYPPAYFHQ 533
>gb|ABR17868.1| unknown [Picea sitchensis]
Length = 601
Score = 231 bits (589), Expect = 5e-58
Identities = 159/451 (35%), Positives = 228/451 (50%), Gaps = 24/451 (5%)
Frame = +3
Query: 309 ELKKYCVNNDGIGLRTYILNNRKELVSIRDELKFALELASDPGKLVIDAMKGFYPQXXXX 488
+LK C D GLR YI+ +RK+ +R+E+ AL A DP +LV+++++GFY
Sbjct: 172 QLKTLCETMDSKGLRKYIIEHRKDAAGLRNEVPSALNSAIDPSRLVLESLEGFY------ 225
Query: 489 XXXXXXSSKGDKDGXXXXXXXXXXXXXXXXMSVVKDK--GEE---FSVQVKESAKKLGIE 653
S K+ + V+ D G E + +KE AK + E
Sbjct: 226 --SLEQKSSDKKESGLPALRRACTLLLESLVPVLADPILGVEHPVLPINIKEQAKGIADE 283
Query: 654 WKGKVSGGSD----SPLEPLAFLQLLASYGLGSEFDSSEVLDLAVSIARRKQAIDLLRAL 821
WK K++ D + LE AFLQLLA++G+ SEFD ++ L +++ARR+Q +L R+L
Sbjct: 284 WKSKINLEGDVANGNSLEAQAFLQLLATFGIASEFDKDDLCKLVLAVARRRQTPELCRSL 343
Query: 822 RMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVAQEIRNKGN 1001
+ K+PD ++ L ++G+Q+EAV F +AF L +KFPPVPLLK+Y K +KK +Q GN
Sbjct: 344 GLESKMPDVVETLVNSGRQIEAVNFAHAFGLTEKFPPVPLLKEYLKDAKKASQASLKSGN 403
Query: 1002 HSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQKASKKRPAVGPT 1181
+S + NEA KEL+A +A+IKCIEEH LESQ+ L KRV QLEK KA +KR A
Sbjct: 404 NSTAAQNEANTKELSAYRAVIKCIEEHKLESQFSPDPLQKRVAQLEKAKADRKRSAGAVK 463
Query: 1182 PADKKQQQQFGN----KRPKPAETRXXXXXXXXXXXXHLQPMSSFVDRFPPYMSSSAQYG 1349
K+ + GN P A R L S+ DR QY
Sbjct: 464 SQPKRPRANGGNAGVYMPPLSAAERTPA----------LYASSNAADRSFYRSLDRVQYS 513
Query: 1350 LVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSHLYSAE----SHL 1517
G P V Y + G + + YG A V +S SR ++Y ++ S L
Sbjct: 514 --GAAPGVTSY--NLQGQSAYDRSNQGIYGAAYG-VGNRSPVSLSRPYMYPSDNMGPSLL 568
Query: 1518 AAGLYDRSMGYGGHGM-------PPSHRSSF 1589
+G Y+ S Y H PP+++SSF
Sbjct: 569 GSGSYNSSTNYNNHHFGSGLPPPPPAYQSSF 599
>emb|CBI26735.3| unnamed protein product [Vitis vinifera]
Length = 403
Score = 228 bits (581), Expect = 4e-57
Identities = 143/408 (35%), Positives = 217/408 (53%), Gaps = 8/408 (1%)
Frame = +3
Query: 336 DGIGLRTYILNNRKELVSIRDELKFALELASDPGKLVIDAMKGFYPQXXXXXXXXXXSSK 515
D LR YI+++ + ++R EL A ++A DP K+V+DA+ GF+P S
Sbjct: 2 DAEALRRYIMDHPNDRETLRSELLDAFQVARDPAKMVLDALTGFFP------------SN 49
Query: 516 GDKDGXXXXXXXXXXXXXXXXMSVVKDKGEEFSVQVKESAKKLGIEWKGKVSGGSDSPLE 695
++DG ++ E V++ AK L EWKGKV G D+ L+
Sbjct: 50 ANEDGSSELHTMRRSCVFMLEQLMLFSP--EIGEDVRQRAKSLAQEWKGKVKVG-DNTLK 106
Query: 696 PLAFLQLLASYGLGSEFDSSEVLDLAVSIARRKQAIDLLRALRMPDKIPDFIQKLTSNGK 875
P+ FL LLA+YGLGS++DS+E+L+L + + R ++ L R L + DK+PD IQ L +GK
Sbjct: 107 PMGFLHLLAAYGLGSDYDSTELLELLIDVVRYREVFGLCRGLNLVDKVPDLIQNLIGSGK 166
Query: 876 QLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVAQEIRNKGNHSVQSLNEATAKELAAVK 1055
AVKFV F+L KFP + +LKD + S+ VA+++R G HS+QS+NEAT+KE++A+K
Sbjct: 167 PNLAVKFVLEFKLTHKFPLIAILKDIVESSRDVARKVRKDGKHSLQSVNEATSKEISALK 226
Query: 1056 AIIKCIEEHNLESQYPRGILDKRVEQLEKQKAS----KKRPAVGPTPADKKQQQQFGNKR 1223
+ K I++++L ++YP L++R+++LE Q A+ KKRPA+ P P K+Q++Q +
Sbjct: 227 LVTKYIKDYDLNNEYPGAPLEERIQKLESQMAARTAAKKRPALAPAPRPKQQKKQKSKQA 286
Query: 1224 PKPAETRXXXXXXXXXXXXHLQPMSSFVDRFPPYMSSSAQYGLVGTPPTVAPYMNSAVGH 1403
A P P++ + GLV P P+MN + G
Sbjct: 287 QTTATASPSVPSGAAGTSSTAAPFQQ------PHLQAP---GLVPDGPV--PFMNPSAGL 335
Query: 1404 YGFAANPVSSYGLATNPVSYGRHLSPSRSHLYSAESHL----AAGLYD 1535
YGFA P+ G +L P HL+ E L A G YD
Sbjct: 336 YGFAGVPMGFPG----------NLGPPMPHLHPMEPQLPMPFAHGGYD 373