BLASTX nr result
ID: Coptis24_contig00013624
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013624 (783 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004147172.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 270 3e-70 ref|XP_003558610.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 268 1e-69 ref|XP_002518172.1| NADH dehydrogenase, putative [Ricinus commun... 265 6e-69 ref|XP_003555723.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydro... 265 1e-68 ref|NP_001148608.1| NADH-ubiquinone oxidoreductase B16.6 subunit... 264 1e-68 >ref|XP_004147172.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucumis sativus] gi|449498576|ref|XP_004160575.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucumis sativus] Length = 143 Score = 270 bits (690), Expect = 3e-70 Identities = 126/140 (90%), Positives = 134/140 (95%) Frame = +2 Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307 A IR KPGMASVKDMP+LQDGPPPGGF PVRYARRIPTKGPSA+AIFLTAFGAFSWGM+Q Sbjct: 4 AAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQ 63 Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487 VGKGNKIRRA+KEEKYAARRAILP+LQAEEDERFVKEWK YLE EA +MKDVPGWKVGES Sbjct: 64 VGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKVGES 123 Query: 488 VYHSGKWMPPATGELRPDVW 547 VY+SGKWMPPATGELRP+VW Sbjct: 124 VYNSGKWMPPATGELRPEVW 143 >ref|XP_003558610.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Brachypodium distachyon] Length = 143 Score = 268 bits (684), Expect = 1e-69 Identities = 123/140 (87%), Positives = 136/140 (97%) Frame = +2 Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307 +++RNKPGMASVKDMP+LQDGPPPGGF PVRYARRIP+KGPSAIA+FLT FGAFSWGM+Q Sbjct: 4 SLVRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAIALFLTTFGAFSWGMYQ 63 Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487 VG+GNK+RRA+KEEK AAR AILPMLQAEEDERFVKEWKKYLEEEARIMK+VPGWKVGES Sbjct: 64 VGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKNVPGWKVGES 123 Query: 488 VYHSGKWMPPATGELRPDVW 547 VY+SGKWMPPATGELRP+VW Sbjct: 124 VYNSGKWMPPATGELRPEVW 143 >ref|XP_002518172.1| NADH dehydrogenase, putative [Ricinus communis] gi|223542768|gb|EEF44305.1| NADH dehydrogenase, putative [Ricinus communis] Length = 143 Score = 265 bits (678), Expect = 6e-69 Identities = 123/140 (87%), Positives = 136/140 (97%) Frame = +2 Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307 A+IRNKPGMASVKDMP LQDGPPPGGFPPVRYARRIP+KGPSA+AIFL AFGAFS+GM+Q Sbjct: 4 AVIRNKPGMASVKDMPFLQDGPPPGGFPPVRYARRIPSKGPSAMAIFLAAFGAFSYGMYQ 63 Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487 VG+GNKIRRA+KEEKYAARRAILP+LQAEEDERFVKEWKKYLE EA +MKDVPGWKVGE+ Sbjct: 64 VGQGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKKYLEYEAEVMKDVPGWKVGEN 123 Query: 488 VYHSGKWMPPATGELRPDVW 547 VY+SGKWMPPA+GELRP+VW Sbjct: 124 VYNSGKWMPPASGELRPEVW 143 >ref|XP_003555723.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Glycine max] Length = 143 Score = 265 bits (676), Expect = 1e-68 Identities = 122/140 (87%), Positives = 133/140 (95%) Frame = +2 Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307 A IR KPGMASVKDMPVLQDGPPPGGF PVR+ARRIP KGPSA+AIFLTAFGAFSWGM+Q Sbjct: 4 AYIRKKPGMASVKDMPVLQDGPPPGGFAPVRFARRIPNKGPSAVAIFLTAFGAFSWGMYQ 63 Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487 VG+GNKIRRA+KEEKYAARR+ILP+LQAEEDERFVKEW KYLE EA +MKDVPGWKVGES Sbjct: 64 VGQGNKIRRALKEEKYAARRSILPVLQAEEDERFVKEWHKYLEYEAEVMKDVPGWKVGES 123 Query: 488 VYHSGKWMPPATGELRPDVW 547 VYHSG+W+PPA+GELRPDVW Sbjct: 124 VYHSGRWVPPASGELRPDVW 143 >ref|NP_001148608.1| NADH-ubiquinone oxidoreductase B16.6 subunit [Zea mays] gi|194700584|gb|ACF84376.1| unknown [Zea mays] gi|195620784|gb|ACG32222.1| NADH-ubiquinone oxidoreductase B16.6 subunit [Zea mays] gi|414865464|tpg|DAA44021.1| TPA: NADH-ubiquinone oxidoreductase B16.6 subunit [Zea mays] Length = 143 Score = 264 bits (675), Expect = 1e-68 Identities = 122/140 (87%), Positives = 135/140 (96%) Frame = +2 Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307 +++RNKPGMAS+K+MPVLQDGPPPGGF PVRYARRIPT GPSA AIFLTAFGAF++GM+Q Sbjct: 4 SLVRNKPGMASIKEMPVLQDGPPPGGFAPVRYARRIPTSGPSATAIFLTAFGAFAYGMYQ 63 Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487 VG+GNK+RRA+KEEK AAR AILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES Sbjct: 64 VGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 123 Query: 488 VYHSGKWMPPATGELRPDVW 547 VY+SGKWMPPATGELRP+VW Sbjct: 124 VYNSGKWMPPATGELRPEVW 143