BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013624
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147172.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   270   3e-70
ref|XP_003558610.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   268   1e-69
ref|XP_002518172.1| NADH dehydrogenase, putative [Ricinus commun...   265   6e-69
ref|XP_003555723.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydro...   265   1e-68
ref|NP_001148608.1| NADH-ubiquinone oxidoreductase B16.6 subunit...   264   1e-68

>ref|XP_004147172.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 13-B-like [Cucumis sativus]
           gi|449498576|ref|XP_004160575.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           13-B-like [Cucumis sativus]
          Length = 143

 Score =  270 bits (690), Expect = 3e-70
 Identities = 126/140 (90%), Positives = 134/140 (95%)
 Frame = +2

Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307
           A IR KPGMASVKDMP+LQDGPPPGGF PVRYARRIPTKGPSA+AIFLTAFGAFSWGM+Q
Sbjct: 4   AAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQ 63

Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487
           VGKGNKIRRA+KEEKYAARRAILP+LQAEEDERFVKEWK YLE EA +MKDVPGWKVGES
Sbjct: 64  VGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKVGES 123

Query: 488 VYHSGKWMPPATGELRPDVW 547
           VY+SGKWMPPATGELRP+VW
Sbjct: 124 VYNSGKWMPPATGELRPEVW 143


>ref|XP_003558610.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 13-B-like [Brachypodium distachyon]
          Length = 143

 Score =  268 bits (684), Expect = 1e-69
 Identities = 123/140 (87%), Positives = 136/140 (97%)
 Frame = +2

Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307
           +++RNKPGMASVKDMP+LQDGPPPGGF PVRYARRIP+KGPSAIA+FLT FGAFSWGM+Q
Sbjct: 4   SLVRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAIALFLTTFGAFSWGMYQ 63

Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487
           VG+GNK+RRA+KEEK AAR AILPMLQAEEDERFVKEWKKYLEEEARIMK+VPGWKVGES
Sbjct: 64  VGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKNVPGWKVGES 123

Query: 488 VYHSGKWMPPATGELRPDVW 547
           VY+SGKWMPPATGELRP+VW
Sbjct: 124 VYNSGKWMPPATGELRPEVW 143


>ref|XP_002518172.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223542768|gb|EEF44305.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 143

 Score =  265 bits (678), Expect = 6e-69
 Identities = 123/140 (87%), Positives = 136/140 (97%)
 Frame = +2

Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307
           A+IRNKPGMASVKDMP LQDGPPPGGFPPVRYARRIP+KGPSA+AIFL AFGAFS+GM+Q
Sbjct: 4   AVIRNKPGMASVKDMPFLQDGPPPGGFPPVRYARRIPSKGPSAMAIFLAAFGAFSYGMYQ 63

Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487
           VG+GNKIRRA+KEEKYAARRAILP+LQAEEDERFVKEWKKYLE EA +MKDVPGWKVGE+
Sbjct: 64  VGQGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKKYLEYEAEVMKDVPGWKVGEN 123

Query: 488 VYHSGKWMPPATGELRPDVW 547
           VY+SGKWMPPA+GELRP+VW
Sbjct: 124 VYNSGKWMPPASGELRPEVW 143


>ref|XP_003555723.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1
           alpha subcomplex subunit 13-B-like [Glycine max]
          Length = 143

 Score =  265 bits (676), Expect = 1e-68
 Identities = 122/140 (87%), Positives = 133/140 (95%)
 Frame = +2

Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307
           A IR KPGMASVKDMPVLQDGPPPGGF PVR+ARRIP KGPSA+AIFLTAFGAFSWGM+Q
Sbjct: 4   AYIRKKPGMASVKDMPVLQDGPPPGGFAPVRFARRIPNKGPSAVAIFLTAFGAFSWGMYQ 63

Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487
           VG+GNKIRRA+KEEKYAARR+ILP+LQAEEDERFVKEW KYLE EA +MKDVPGWKVGES
Sbjct: 64  VGQGNKIRRALKEEKYAARRSILPVLQAEEDERFVKEWHKYLEYEAEVMKDVPGWKVGES 123

Query: 488 VYHSGKWMPPATGELRPDVW 547
           VYHSG+W+PPA+GELRPDVW
Sbjct: 124 VYHSGRWVPPASGELRPDVW 143


>ref|NP_001148608.1| NADH-ubiquinone oxidoreductase B16.6 subunit [Zea mays]
           gi|194700584|gb|ACF84376.1| unknown [Zea mays]
           gi|195620784|gb|ACG32222.1| NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
           gi|414865464|tpg|DAA44021.1| TPA: NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
          Length = 143

 Score =  264 bits (675), Expect = 1e-68
 Identities = 122/140 (87%), Positives = 135/140 (96%)
 Frame = +2

Query: 128 AMIRNKPGMASVKDMPVLQDGPPPGGFPPVRYARRIPTKGPSAIAIFLTAFGAFSWGMWQ 307
           +++RNKPGMAS+K+MPVLQDGPPPGGF PVRYARRIPT GPSA AIFLTAFGAF++GM+Q
Sbjct: 4   SLVRNKPGMASIKEMPVLQDGPPPGGFAPVRYARRIPTSGPSATAIFLTAFGAFAYGMYQ 63

Query: 308 VGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 487
           VG+GNK+RRA+KEEK AAR AILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES
Sbjct: 64  VGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKVGES 123

Query: 488 VYHSGKWMPPATGELRPDVW 547
           VY+SGKWMPPATGELRP+VW
Sbjct: 124 VYNSGKWMPPATGELRPEVW 143