BLASTX nr result

ID: Coptis24_contig00013620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013620
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258...   124   1e-26
emb|CBI23051.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_003602296.1| Neuroblastoma-amplified sequence [Medicago t...   120   9e-26
gb|ACC64519.1| neuroblastoma-amplified gene [Nicotiana benthamiana]   120   1e-25

>ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera]
          Length = 2390

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/83 (71%), Positives = 72/83 (86%)
 Frame = +1

Query: 1    SKNVTAEADIVDMLTIKLPNLGVTLLPMQFRQIRDPMEIINMVIASQAGVYFIVDELIDI 180
            S+NV AEAD++D LT+KLP LGVTLLPMQFRQI+DPMEII M I SQAG Y  VDEL++I
Sbjct: 1041 SRNVKAEADVIDALTVKLPELGVTLLPMQFRQIKDPMEIIKMAITSQAGAYLQVDELVEI 1100

Query: 181  GKVLGLSSPDDIAAVQEAVAREA 249
             K+LGL+S DD++AV+EA+AREA
Sbjct: 1101 AKLLGLNSQDDVSAVEEAIAREA 1123


>emb|CBI23051.3| unnamed protein product [Vitis vinifera]
          Length = 2325

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/83 (71%), Positives = 72/83 (86%)
 Frame = +1

Query: 1    SKNVTAEADIVDMLTIKLPNLGVTLLPMQFRQIRDPMEIINMVIASQAGVYFIVDELIDI 180
            S+NV AEAD++D LT+KLP LGVTLLPMQFRQI+DPMEII M I SQAG Y  VDEL++I
Sbjct: 1152 SRNVKAEADVIDALTVKLPELGVTLLPMQFRQIKDPMEIIKMAITSQAGAYLQVDELVEI 1211

Query: 181  GKVLGLSSPDDIAAVQEAVAREA 249
             K+LGL+S DD++AV+EA+AREA
Sbjct: 1212 AKLLGLNSQDDVSAVEEAIAREA 1234


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
            predicted protein [Populus trichocarpa]
          Length = 2421

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/83 (71%), Positives = 70/83 (84%)
 Frame = +1

Query: 1    SKNVTAEADIVDMLTIKLPNLGVTLLPMQFRQIRDPMEIINMVIASQAGVYFIVDELIDI 180
            S+NV  EAD++D LT+KLP LGVTLLPMQFRQI+DPMEII M I SQAG Y  VDELI++
Sbjct: 1063 SRNVQTEADLIDALTVKLPYLGVTLLPMQFRQIKDPMEIIKMAITSQAGAYLHVDELIEV 1122

Query: 181  GKVLGLSSPDDIAAVQEAVAREA 249
             K+LGL+S DDI+ VQEA+AREA
Sbjct: 1123 AKLLGLNSSDDISTVQEAIAREA 1145


>ref|XP_003602296.1| Neuroblastoma-amplified sequence [Medicago truncatula]
            gi|355491344|gb|AES72547.1| Neuroblastoma-amplified
            sequence [Medicago truncatula]
          Length = 2401

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/83 (68%), Positives = 70/83 (84%)
 Frame = +1

Query: 1    SKNVTAEADIVDMLTIKLPNLGVTLLPMQFRQIRDPMEIINMVIASQAGVYFIVDELIDI 180
            S NV AEADI+D LT+KLPNLGV +LPMQFRQI+DPMEI+ M I SQ G YF VDEL+++
Sbjct: 1044 SGNVKAEADIIDALTVKLPNLGVNILPMQFRQIKDPMEIVKMAITSQTGAYFHVDELVEV 1103

Query: 181  GKVLGLSSPDDIAAVQEAVAREA 249
             ++LGL S DDI+AV+EA+AREA
Sbjct: 1104 ARLLGLRSADDISAVEEAIAREA 1126


>gb|ACC64519.1| neuroblastoma-amplified gene [Nicotiana benthamiana]
          Length = 2409

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/83 (66%), Positives = 73/83 (87%)
 Frame = +1

Query: 1    SKNVTAEADIVDMLTIKLPNLGVTLLPMQFRQIRDPMEIINMVIASQAGVYFIVDELIDI 180
            S+NV   AD++D +T+KLPNLGVT+LPMQFRQI+DPMEI+N+V++SQ G Y  VDE+I++
Sbjct: 1063 SRNVRVAADVIDAVTVKLPNLGVTMLPMQFRQIKDPMEIVNLVVSSQGGAYLNVDEIIEL 1122

Query: 181  GKVLGLSSPDDIAAVQEAVAREA 249
             K+LGLSS +DI+AVQEA+AREA
Sbjct: 1123 AKLLGLSSHNDISAVQEAIAREA 1145


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