BLASTX nr result

ID: Coptis24_contig00013619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013619
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [...   160   1e-37
emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]   159   2e-37
ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002521429.1| conserved hypothetical protein [Ricinus comm...   153   1e-35
ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35

>ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 295

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/93 (82%), Positives = 86/93 (92%)
 Frame = -2

Query: 281 MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAIV 102
           MD STMDRGQ+TLLGSA  VML+MHFTVQL+SQHLFYWKNPKEQKAIIII+LMAP+YA+ 
Sbjct: 1   MDISTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIVLMAPIYAVD 60

Query: 101 SFVGLSDFQGSRTFFLFLESVKECYEALVIAKF 3
           SFVGL DFQGS+ FF+ LES+KECYEALVIAKF
Sbjct: 61  SFVGLLDFQGSKAFFMLLESIKECYEALVIAKF 93


>emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]
          Length = 295

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/93 (82%), Positives = 85/93 (91%)
 Frame = -2

Query: 281 MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAIV 102
           MD STMDRGQ+TLLGSA  VML+MHFTVQL+SQHLFYWKNPKEQKAIIII LMAP+YA+ 
Sbjct: 1   MDJSTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIXLMAPIYAVD 60

Query: 101 SFVGLSDFQGSRTFFLFLESVKECYEALVIAKF 3
           SFVGL DFQGS+ FF+ LES+KECYEALVIAKF
Sbjct: 61  SFVGLLDFQGSKAFFMLLESIKECYEALVIAKF 93


>ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|222859714|gb|EEE97261.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/93 (81%), Positives = 83/93 (89%)
 Frame = -2

Query: 281 MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAIV 102
           MDFS MDRGQITLLG A  V+LT+ FTVQLLSQHLFYWKNPKEQKAIIII+LMAP+YA+ 
Sbjct: 1   MDFSNMDRGQITLLGCAFCVLLTLLFTVQLLSQHLFYWKNPKEQKAIIIIILMAPIYAVD 60

Query: 101 SFVGLSDFQGSRTFFLFLESVKECYEALVIAKF 3
           SFVGL +FQGS  FF FL+SVKECYEALVIAKF
Sbjct: 61  SFVGLLNFQGSEAFFTFLDSVKECYEALVIAKF 93


>ref|XP_002521429.1| conserved hypothetical protein [Ricinus communis]
           gi|223539328|gb|EEF40919.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  153 bits (387), Expect = 1e-35
 Identities = 72/93 (77%), Positives = 85/93 (91%)
 Frame = -2

Query: 281 MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAIV 102
           MD ST++RGQ+TL+GSA   ML+MHFTVQLLSQHLFYWKNPKEQKAI+II+LMAP+YAI 
Sbjct: 1   MDISTLNRGQLTLMGSAFCTMLSMHFTVQLLSQHLFYWKNPKEQKAILIIILMAPIYAID 60

Query: 101 SFVGLSDFQGSRTFFLFLESVKECYEALVIAKF 3
           SFVGL D +GS+ FF+FL+S+KECYEALVIAKF
Sbjct: 61  SFVGLLDIRGSKAFFMFLDSIKECYEALVIAKF 93


>ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|222848628|gb|EEE86175.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/94 (77%), Positives = 84/94 (89%)
 Frame = -2

Query: 284 VMDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAI 105
           +MDFS+MDRGQITLLG    V+L++HFTVQLLSQH+FYWKNPKEQKAIIII+LMAP+YA 
Sbjct: 1   MMDFSSMDRGQITLLGCGFCVLLSLHFTVQLLSQHIFYWKNPKEQKAIIIIILMAPIYAA 60

Query: 104 VSFVGLSDFQGSRTFFLFLESVKECYEALVIAKF 3
            S+VGL D QGS+ FF FL+SVKECYEALVIAKF
Sbjct: 61  DSYVGLLDIQGSKAFFTFLDSVKECYEALVIAKF 94


Top