BLASTX nr result

ID: Coptis24_contig00013616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013616
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167277.1| PREDICTED: gamma carbonic anhydrase-like 2, ...   375   e-102
ref|XP_002511161.1| Protein yrdA, putative [Ricinus communis] gi...   372   e-100
ref|XP_002283913.1| PREDICTED: uncharacterized protein At3g48680...   367   3e-99
ref|XP_002321712.1| predicted protein [Populus trichocarpa] gi|2...   366   4e-99
ref|XP_002318141.1| predicted protein [Populus trichocarpa] gi|1...   366   4e-99

>ref|XP_004167277.1| PREDICTED: gamma carbonic anhydrase-like 2, mitochondrial-like
           [Cucumis sativus]
          Length = 244

 Score =  375 bits (963), Expect = e-102
 Identities = 183/207 (88%), Positives = 192/207 (92%)
 Frame = +3

Query: 138 DRVKWDYRAQRQIIPLGQWVPKIAVDAYVAPNVVLAGQVKVCDGSSVWAGSVLRGDLNKI 317
           DRVKWDYR QRQIIPLGQW+P IAVDAYVAPNVVLAGQVKVCDG+SVWAGSVLRGDLNKI
Sbjct: 38  DRVKWDYRGQRQIIPLGQWLPTIAVDAYVAPNVVLAGQVKVCDGASVWAGSVLRGDLNKI 97

Query: 318 TIGFFSNLQERCVVHAAWASPTGLPAETSIERYVTIGAYSLLRSCIIEPECIIGQRSILM 497
           TIGF SN+QERCV+HAAW+SPTGLPAETS+ER+VTIGAY LLRSC IEPECIIGQ SILM
Sbjct: 98  TIGFCSNVQERCVLHAAWSSPTGLPAETSVERFVTIGAYCLLRSCTIEPECIIGQHSILM 157

Query: 498 EGSLVETQSILEAGSVLPPGRRIPTGELWAGNPARFVRTLSHEEILEIPKLAVGINDLSK 677
           EGSLVET SILEAGSV+PPGRRIPTGELWAGNPARFVRTL+HEE LEIPKLAV INDLSK
Sbjct: 158 EGSLVETHSILEAGSVVPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSK 217

Query: 678 SHFSEFLPYSTGYLEVEKLKKSFGIPI 758
            HFSEFLPYS  YLEVEK KKS GI I
Sbjct: 218 DHFSEFLPYSQAYLEVEKFKKSLGITI 244


>ref|XP_002511161.1| Protein yrdA, putative [Ricinus communis]
           gi|223550276|gb|EEF51763.1| Protein yrdA, putative
           [Ricinus communis]
          Length = 253

 Score =  372 bits (954), Expect = e-100
 Identities = 182/207 (87%), Positives = 192/207 (92%)
 Frame = +3

Query: 138 DRVKWDYRAQRQIIPLGQWVPKIAVDAYVAPNVVLAGQVKVCDGSSVWAGSVLRGDLNKI 317
           DRVKWDYR QRQIIPLGQW+PK+AVDAYVAPNVVLAGQV V DG+SVW+GSVLRGDLNKI
Sbjct: 47  DRVKWDYRGQRQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGASVWSGSVLRGDLNKI 106

Query: 318 TIGFFSNLQERCVVHAAWASPTGLPAETSIERYVTIGAYSLLRSCIIEPECIIGQRSILM 497
           T+GF SN+QERCVVHAAW SPTGLPAETSIERYVTIGAYSLLRSC IEPECIIGQ SILM
Sbjct: 107 TVGFCSNVQERCVVHAAWNSPTGLPAETSIERYVTIGAYSLLRSCTIEPECIIGQHSILM 166

Query: 498 EGSLVETQSILEAGSVLPPGRRIPTGELWAGNPARFVRTLSHEEILEIPKLAVGINDLSK 677
           EGSLVET SILEAGSV+PPGRRIPTGELWAGNPARFVR L+HEE LEIPKLAV INDLSK
Sbjct: 167 EGSLVETHSILEAGSVVPPGRRIPTGELWAGNPARFVRALTHEETLEIPKLAVAINDLSK 226

Query: 678 SHFSEFLPYSTGYLEVEKLKKSFGIPI 758
           +HFSEFLPYST YLEVEK+KK  GI I
Sbjct: 227 NHFSEFLPYSTVYLEVEKMKKKLGISI 253


>ref|XP_002283913.1| PREDICTED: uncharacterized protein At3g48680, mitochondrial [Vitis
           vinifera]
          Length = 245

 Score =  367 bits (941), Expect = 3e-99
 Identities = 181/207 (87%), Positives = 189/207 (91%)
 Frame = +3

Query: 138 DRVKWDYRAQRQIIPLGQWVPKIAVDAYVAPNVVLAGQVKVCDGSSVWAGSVLRGDLNKI 317
           DRVKWDYR QR+IIPLGQW+PKIAVDAYVAPNVVLAGQV V DGSSVW GSVLRGDLNKI
Sbjct: 39  DRVKWDYRGQRRIIPLGQWLPKIAVDAYVAPNVVLAGQVTVGDGSSVWNGSVLRGDLNKI 98

Query: 318 TIGFFSNLQERCVVHAAWASPTGLPAETSIERYVTIGAYSLLRSCIIEPECIIGQRSILM 497
           TIGF  N+QERCV+HAAW SPTGLPA T IERYVT+GA SLLRSC IEPECI+GQ SILM
Sbjct: 99  TIGFCCNIQERCVIHAAWNSPTGLPAHTFIERYVTVGASSLLRSCTIEPECIVGQHSILM 158

Query: 498 EGSLVETQSILEAGSVLPPGRRIPTGELWAGNPARFVRTLSHEEILEIPKLAVGINDLSK 677
           EGSL+ET SILEAGSVLPPGRRIPTGELWAGNPARFVRTL+HEE LEIPKLAV INDLS 
Sbjct: 159 EGSLMETHSILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLST 218

Query: 678 SHFSEFLPYSTGYLEVEKLKKSFGIPI 758
           SHFSEFLPYST YLEVEKLKKSFGI I
Sbjct: 219 SHFSEFLPYSTAYLEVEKLKKSFGISI 245


>ref|XP_002321712.1| predicted protein [Populus trichocarpa] gi|222868708|gb|EEF05839.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  366 bits (940), Expect = 4e-99
 Identities = 181/203 (89%), Positives = 189/203 (93%)
 Frame = +3

Query: 138 DRVKWDYRAQRQIIPLGQWVPKIAVDAYVAPNVVLAGQVKVCDGSSVWAGSVLRGDLNKI 317
           DRVKWD R QRQIIPLGQW+PK+AVDAYVAPNVVLAGQV V DG+SVW G+VLRGDLNKI
Sbjct: 45  DRVKWDSRGQRQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVYDGASVWNGAVLRGDLNKI 104

Query: 318 TIGFFSNLQERCVVHAAWASPTGLPAETSIERYVTIGAYSLLRSCIIEPECIIGQRSILM 497
           T+GF SN+QERCVVHAAW SPTGLPAETSIERYVTIGAYSLLRSC IEPECIIGQ SILM
Sbjct: 105 TVGFSSNVQERCVVHAAWNSPTGLPAETSIERYVTIGAYSLLRSCTIEPECIIGQHSILM 164

Query: 498 EGSLVETQSILEAGSVLPPGRRIPTGELWAGNPARFVRTLSHEEILEIPKLAVGINDLSK 677
           EGSLVET SILEAGSVLPPGRRIPTGELWAGNPARFVRTL+HEEILEIPKLAV IND SK
Sbjct: 165 EGSLVETHSILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEEILEIPKLAVAINDHSK 224

Query: 678 SHFSEFLPYSTGYLEVEKLKKSF 746
           +HFSEFLPYST YLEVEKLKK F
Sbjct: 225 THFSEFLPYSTVYLEVEKLKKKF 247


>ref|XP_002318141.1| predicted protein [Populus trichocarpa] gi|118488068|gb|ABK95854.1|
           unknown [Populus trichocarpa]
           gi|222858814|gb|EEE96361.1| predicted protein [Populus
           trichocarpa]
          Length = 251

 Score =  366 bits (940), Expect = 4e-99
 Identities = 180/207 (86%), Positives = 190/207 (91%)
 Frame = +3

Query: 138 DRVKWDYRAQRQIIPLGQWVPKIAVDAYVAPNVVLAGQVKVCDGSSVWAGSVLRGDLNKI 317
           DRVKWDYR QRQIIPLGQW+PK+AVDAYVAPNVVLAGQV V DG+SVW G+VLRGDLNKI
Sbjct: 45  DRVKWDYRGQRQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVYDGASVWNGAVLRGDLNKI 104

Query: 318 TIGFFSNLQERCVVHAAWASPTGLPAETSIERYVTIGAYSLLRSCIIEPECIIGQRSILM 497
           T+GF SN+QERCVVHAAW SPTGLPAETSIERYVTIGAYSLLRSC IEPECIIGQ SILM
Sbjct: 105 TVGFCSNVQERCVVHAAWNSPTGLPAETSIERYVTIGAYSLLRSCTIEPECIIGQHSILM 164

Query: 498 EGSLVETQSILEAGSVLPPGRRIPTGELWAGNPARFVRTLSHEEILEIPKLAVGINDLSK 677
           EGSLVET SILEAGSV+PPGRRIPTGELWAGNPARFVRTL+HEE LEIPKLAV INDLSK
Sbjct: 165 EGSLVETHSILEAGSVVPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSK 224

Query: 678 SHFSEFLPYSTGYLEVEKLKKSFGIPI 758
           +HF EFLPYST YLEVEKLKK   I +
Sbjct: 225 THFFEFLPYSTVYLEVEKLKKKLEIKV 251


Top