BLASTX nr result

ID: Coptis24_contig00013593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013593
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306550.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002514011.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
ref|XP_002285706.1| PREDICTED: uncharacterized protein LOC100264...    94   1e-17
ref|XP_003544821.1| PREDICTED: uncharacterized protein LOC100802...    88   6e-16
ref|NP_001235862.1| uncharacterized protein LOC100305727 [Glycin...    83   2e-14

>ref|XP_002306550.1| predicted protein [Populus trichocarpa] gi|222855999|gb|EEE93546.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  101 bits (251), Expect = 7e-20
 Identities = 63/138 (45%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
 Frame = -1

Query: 407 RYCSNLYPKAETYEVCNWCLNKDGSKLERTQSSLSFTHRRNNSEGEEENKMRIKRNNGNN 228
           RYCSNLYPKAE+Y+VCNWCL+ D +K +   SS S +  +NNSE +  N    K+ NG+N
Sbjct: 42  RYCSNLYPKAESYQVCNWCLSHD-TKEKSQNSSNSSSSNKNNSEDDSRNN---KKKNGDN 97

Query: 227 SSHVTSMKVQKRVTNTPLHVNSPIKKQRVHSDQSIEGKKRVY---HAEESLRRTKSEGMI 57
            +  +    +       L +NSPIKKQR   ++S   ++R+      EE LRRT+SE M 
Sbjct: 98  QAGPS----KNHRGTLRLQINSPIKKQR-SPERSPSTRRRLITNGKLEEKLRRTRSEEMS 152

Query: 56  KAGMLKQQVFRGKVRRYR 3
             G  K QVFR KVRRY+
Sbjct: 153 NNGFTK-QVFRNKVRRYK 169


>ref|XP_002514011.1| conserved hypothetical protein [Ricinus communis]
           gi|223547097|gb|EEF48594.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 188

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
 Frame = -1

Query: 407 RYCSNLYPKAETYEVCNWCLNKDGSKLERTQ-SSLSFTHRRNNSEGEEENKMRIKRNNGN 231
           RYCSNLYPKAE+Y+VCNWCL+ D    ER+Q SS S +  +N+SE + +N+   K+ +GN
Sbjct: 44  RYCSNLYPKAESYQVCNWCLSHDIK--ERSQNSSNSSSSNKNSSEDDSKNRQN-KKKSGN 100

Query: 230 NSSHVTSMKVQKRVTNTPLHVNSPIKKQRVHSDQSIEGKKRVY---HAEE--SLRRTKSE 66
           +      +K  +R       +NSPIKKQR         ++R+      EE   +RRTKSE
Sbjct: 101 SEGSGGGLKTHQRGNLQLQVINSPIKKQRSPERSPQTTRRRLISNGRLEEIKLIRRTKSE 160

Query: 65  GMIKAGMLKQQVFRGKVRRYR 3
            +     + + VFR KVRRY+
Sbjct: 161 DISNNNGITKHVFRNKVRRYK 181


>ref|XP_002285706.1| PREDICTED: uncharacterized protein LOC100264219 [Vitis vinifera]
          Length = 176

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
 Frame = -1

Query: 407 RYCSNLYPKAETYEVCNWCLNKDGSKLERTQSSLSFTHRRNNSEGEEENKMRIKRNNGNN 228
           RYCSNLYPKA++Y VCNWCLN+     E+TQ+S   ++  ++++  EEN  RIK+    +
Sbjct: 45  RYCSNLYPKADSYRVCNWCLNQKDDTPEKTQNS---SNSSSSNKNNEENDGRIKKKKIGS 101

Query: 227 SSHVTSMKVQKRVTNTPLHVNSPIKKQRVHSDQSIEGKKRVYHA---EESLRRTKSEGMI 57
            SH    K Q+     P  V+ PIKKQ+   ++S   +KR+  +   EE L RT SEG  
Sbjct: 102 GSHA---KAQRGSLQLP--VSGPIKKQK-SPERSPTTRKRIIASGCMEERLTRTNSEG-- 153

Query: 56  KAGMLKQQVFRGKVRRYR 3
            +G+ K  VFR KVRRY+
Sbjct: 154 -SGITK-HVFRNKVRRYK 169


>ref|XP_003544821.1| PREDICTED: uncharacterized protein LOC100802817 [Glycine max]
          Length = 198

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
 Frame = -1

Query: 407 RYCSNLYPKAETYEVCNWCLN-KDGSKLERTQSSLSFTHRRNNSEGEEENKMRIKRNNGN 231
           RYCSNLYPK E+   CNWCL+ ++ +K + T SS S +  RNN +     ++R    NGN
Sbjct: 41  RYCSNLYPKPESLGTCNWCLSQREDTKEKSTNSSNSSSSIRNNDDERRYKRIR----NGN 96

Query: 230 NSSHVTSMKVQKRVTNTPLH--VNSPIKKQR-VHSDQS--------------IEGKKRVY 102
           N+S      V+K V  + LH  +  PIKK +   S +S              +  +KR+ 
Sbjct: 97  NNSAQNIGPVKKEVKGSVLHLQIQKPIKKPKSPESSRSPSASNSPPKSSLVLVSTRKRIV 156

Query: 101 ---HAEESLRRTKSEGMIKAGMLKQQVFRGKVRRYR 3
                EE LRRT+SE + ++G  K QVFR KVRRY+
Sbjct: 157 TNGALEERLRRTRSENITRSGTTK-QVFRNKVRRYK 191


>ref|NP_001235862.1| uncharacterized protein LOC100305727 [Glycine max]
           gi|255626439|gb|ACU13564.1| unknown [Glycine max]
          Length = 199

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
 Frame = -1

Query: 407 RYCSNLYPKAETYEVCNWCLN-KDGSKLERTQSSLSFTHRRNNSEGEEENKMRIKRNNGN 231
           RYCSNLYPK E+   CNWCL+ ++ +K   T SS S +  RNN   ++E++++  RN  +
Sbjct: 41  RYCSNLYPKPESLGTCNWCLSQREDTKERSTNSSNSSSSIRNN---DDESRIKRIRNGNS 97

Query: 230 NSSHVTSMKVQKRVTNTPLH--VNSPIKKQR---------------VHSDQSIEGKKRVY 102
            +S      V+K V  + LH  ++ PIKK +                 S   +  +KR+ 
Sbjct: 98  YNSAQNIGPVKKGVKGSVLHLQIHKPIKKPKSPESSRSPSASNSPPKSSPVLVSTRKRIV 157

Query: 101 ---HAEESLRRTKSEGMIKAGMLKQQVFRGKVRRYR 3
                EE LRRT+SE + ++G  K QVFR KVRRY+
Sbjct: 158 TNGTLEERLRRTRSEDITRSGATK-QVFRNKVRRYK 192


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