BLASTX nr result
ID: Coptis24_contig00013574
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013574 (657 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522492.1| conserved hypothetical protein [Ricinus comm... 160 2e-37 ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248... 160 2e-37 ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|2... 153 3e-35 ref|NP_177102.1| uncharacterized protein [Arabidopsis thaliana] ... 152 5e-35 ref|XP_003607775.1| ATP synthase subunit beta [Medicago truncatu... 152 5e-35 >ref|XP_002522492.1| conserved hypothetical protein [Ricinus communis] gi|223538377|gb|EEF39984.1| conserved hypothetical protein [Ricinus communis] Length = 363 Score = 160 bits (406), Expect = 2e-37 Identities = 84/127 (66%), Positives = 94/127 (74%) Frame = +1 Query: 277 NERFDSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAIILSNVLVDQSFFKRLTIRL 456 N +F SMNA+EILRET+RILR N FM+IAALLICPVSAI+LSNV VDQS KRLTIRL Sbjct: 44 NHQFHSMNALEILRETVRILRCNSSSFMIIAALLICPVSAIVLSNVFVDQSIVKRLTIRL 103 Query: 457 LLVAQSCGLPLSNLIKHLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYSRNKF 636 LLVA+S GLPL +K C LSE+ + + PL IT SLLSKAAVVY VDCTYSR Sbjct: 104 LLVAKSSGLPLRPFVKQSCHHLSEMAIASAMYFPLFITLSLLSKAAVVYSVDCTYSRQNI 163 Query: 637 YTGKFFG 657 KF G Sbjct: 164 DVSKFIG 170 >ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248804 [Vitis vinifera] Length = 347 Score = 160 bits (405), Expect = 2e-37 Identities = 82/122 (67%), Positives = 98/122 (80%) Frame = +1 Query: 289 DSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAIILSNVLVDQSFFKRLTIRLLLVA 468 D MNA++ILRET+ ILRYN GFM+IAALLICPVSA++LSNVLVDQS KRL+IRLLLVA Sbjct: 36 DPMNALQILRETVWILRYNSSGFMLIAALLICPVSALLLSNVLVDQSIVKRLSIRLLLVA 95 Query: 469 QSCGLPLSNLIKHLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYSRNKFYTGK 648 +S GLPL IK CQ+ SE+ ++A PL+ T SLLSKAAVVY VDC+YSR KF + K Sbjct: 96 RSSGLPLRPFIKQSCQKFSEMAISAATCFPLYFTISLLSKAAVVYSVDCSYSRKKFDSSK 155 Query: 649 FF 654 F+ Sbjct: 156 FY 157 >ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|222864066|gb|EEF01197.1| predicted protein [Populus trichocarpa] Length = 350 Score = 153 bits (386), Expect = 3e-35 Identities = 87/151 (57%), Positives = 106/151 (70%), Gaps = 3/151 (1%) Frame = +1 Query: 208 DGSSE---EKNELASPDANLRRSFSINERFDSMNAMEILRETIRILRYNCPGFMVIAALL 378 +GS E + +EL S D + R N +F SM+A+EILRET+RILR N FM IAALL Sbjct: 9 EGSEETHLQNSELESSDFSDRH----NHQFHSMSALEILRETVRILRCNSWSFMTIAALL 64 Query: 379 ICPVSAIILSNVLVDQSFFKRLTIRLLLVAQSCGLPLSNLIKHLCQRLSEIILTAIFSVP 558 ICPVSAI+LSNVLVDQS K+L++RLLLVA+S GLPL IK C R SE+ +++ P Sbjct: 65 ICPVSAILLSNVLVDQSIVKKLSVRLLLVAKSSGLPLRPFIKQSCHRFSEMAVSSAMCFP 124 Query: 559 LHITFSLLSKAAVVYMVDCTYSRNKFYTGKF 651 L IT SLLS+AAVVY VDCTYS+ KF Sbjct: 125 LFITLSLLSRAAVVYSVDCTYSKKNVDGSKF 155 >ref|NP_177102.1| uncharacterized protein [Arabidopsis thaliana] gi|12597781|gb|AAG60093.1|AC073178_4 unknown protein [Arabidopsis thaliana] gi|61742552|gb|AAX55097.1| hypothetical protein At1g69430 [Arabidopsis thaliana] gi|71905467|gb|AAZ52711.1| hypothetical protein At1g69430 [Arabidopsis thaliana] gi|332196803|gb|AEE34924.1| uncharacterized protein [Arabidopsis thaliana] Length = 350 Score = 152 bits (384), Expect = 5e-35 Identities = 80/147 (54%), Positives = 103/147 (70%) Frame = +1 Query: 211 GSSEEKNELASPDANLRRSFSINERFDSMNAMEILRETIRILRYNCPGFMVIAALLICPV 390 GS+ + + ++ S S + +F SMNA+EILRET+RILRYN FM+IA LLICPV Sbjct: 13 GSNSKLRKFEIESSSSSPSSSSDHKFHSMNALEILRETVRILRYNLGAFMLIALLLICPV 72 Query: 391 SAIILSNVLVDQSFFKRLTIRLLLVAQSCGLPLSNLIKHLCQRLSEIILTAIFSVPLHIT 570 SAI+L N+LVDQS LT+RLLLV++S GLPL +++ CQ+ SE +++ PL IT Sbjct: 73 SAILLPNLLVDQSVVNSLTVRLLLVSKSSGLPLLPFVRNSCQKFSETAVSSAMCFPLFIT 132 Query: 571 FSLLSKAAVVYMVDCTYSRNKFYTGKF 651 SLLS+AAVVY VDCTYSR K KF Sbjct: 133 LSLLSRAAVVYSVDCTYSRKKVVVTKF 159 >ref|XP_003607775.1| ATP synthase subunit beta [Medicago truncatula] gi|355508830|gb|AES89972.1| ATP synthase subunit beta [Medicago truncatula] Length = 409 Score = 152 bits (384), Expect = 5e-35 Identities = 83/155 (53%), Positives = 104/155 (67%), Gaps = 5/155 (3%) Frame = +1 Query: 202 KMDGSSEEKNELASPDANLRRSFSI-----NERFDSMNAMEILRETIRILRYNCPGFMVI 366 K DGS E + LR++ + N SMNA++ILRETIRILR+N FM+I Sbjct: 18 KKDGSDETR---------LRQALELELSDHNHEIQSMNALDILRETIRILRFNSWAFMII 68 Query: 367 AALLICPVSAIILSNVLVDQSFFKRLTIRLLLVAQSCGLPLSNLIKHLCQRLSEIILTAI 546 A LLICPVSA++LSNVLVD+S K LTIRL+LVA++ GLPL +IK CQR ++ ++ + Sbjct: 69 AFLLICPVSAVLLSNVLVDESIVKNLTIRLMLVAETSGLPLRPMIKQSCQRFADTVIASA 128 Query: 547 FSVPLHITFSLLSKAAVVYMVDCTYSRNKFYTGKF 651 PL+ T LLSK AVVY VDCTYSR KF KF Sbjct: 129 MCFPLYATLLLLSKTAVVYSVDCTYSRKKFDGSKF 163