BLASTX nr result

ID: Coptis24_contig00013573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013573
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321224.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002524574.1| auxilin, putative [Ricinus communis] gi|2235...    62   7e-08
ref|NP_001066970.1| Os12g0548200 [Oryza sativa Japonica Group] g...    58   1e-06
gb|EEC69454.1| hypothetical protein OsI_38641 [Oryza sativa Indi...    58   1e-06

>ref|XP_002321224.1| predicted protein [Populus trichocarpa] gi|222861997|gb|EEE99539.1|
           predicted protein [Populus trichocarpa]
          Length = 941

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 43/88 (48%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
 Frame = -3

Query: 251 EVEKES-GFDDLLPGFGGSSA-SANRGTSGSSQ---PLQSRVPSVVPVSTNPFDVLESTS 87
           +VE +S  FDDLLPGFGGSS+ S NR TS S Q   P  +    V  V  + F VLESTS
Sbjct: 189 KVEMDSTAFDDLLPGFGGSSSPSVNRSTSESGQFQKPSSNSARPVPGVMEDLFVVLESTS 248

Query: 86  VAENGSSKLYTEPLQKPGKPSEPRSTKV 3
                SS L+T+PL++  K S   STK+
Sbjct: 249 TPPTSSSGLFTDPLEEISKISNTGSTKI 276


>ref|XP_002524574.1| auxilin, putative [Ricinus communis] gi|223536127|gb|EEF37782.1|
           auxilin, putative [Ricinus communis]
          Length = 983

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 43/88 (48%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
 Frame = -3

Query: 251 EVEKESG-FDDLLPGFGGSSA-SANRGTSGSSQPLQSRVPSVVPVST---NPFDVLESTS 87
           EVEK+S  FDDLLPGFG SS+ S  R TS S++  +S   SV   S    +PF +L+STS
Sbjct: 190 EVEKDSAMFDDLLPGFGRSSSPSIARSTSESTRAQKSSTNSVKTASNMMEDPFVILQSTS 249

Query: 86  VAENGSSKLYTEPLQKPGKPSEPRSTKV 3
                SS LYT+PL +  K     STKV
Sbjct: 250 TPAASSSGLYTDPLDEISKFRSTGSTKV 277


>ref|NP_001066970.1| Os12g0548200 [Oryza sativa Japonica Group]
           gi|77556081|gb|ABA98877.1| expressed protein [Oryza
           sativa Japonica Group] gi|113649477|dbj|BAF29989.1|
           Os12g0548200 [Oryza sativa Japonica Group]
          Length = 925

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = -3

Query: 236 SGFDDLLPGFGGSSASANRGTSGSSQPLQSRVPSV-VPVSTNPFDVLESTSVAENGSSKL 60
           +GFDDL+PGFGG      R T G+     S   S    ++++PFDVL +TS +++ SS +
Sbjct: 177 AGFDDLIPGFGGRIPMRARETVGTKDKNVSMSTSKPASMASDPFDVLGTTSTSKHTSSGI 236

Query: 59  YTEPLQKPGKPSEPRSTK 6
           +T+PL + G+P++ +  K
Sbjct: 237 FTDPLDELGRPAKSQGKK 254


>gb|EEC69454.1| hypothetical protein OsI_38641 [Oryza sativa Indica Group]
          Length = 925

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = -3

Query: 236 SGFDDLLPGFGGSSASANRGTSGSSQPLQSRVPSV-VPVSTNPFDVLESTSVAENGSSKL 60
           +GFDDL+PGFGG      R T G+     S   S    ++++PFDVL +TS +++ SS +
Sbjct: 178 AGFDDLIPGFGGRIPMRARETVGTKDKNVSMSTSKPASMASDPFDVLGTTSTSKHTSSGI 237

Query: 59  YTEPLQKPGKPSEPRSTK 6
           +T+PL + G+P++ +  K
Sbjct: 238 FTDPLDELGRPAKSQGKK 255


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