BLASTX nr result
ID: Coptis24_contig00013567
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013567
(2122 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vit... 500 e-139
emb|CBI30623.3| unnamed protein product [Vitis vinifera] 472 e-130
emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera] 469 e-129
ref|XP_002522498.1| Auxin response factor, putative [Ricinus com... 444 e-122
gb|ADL36577.1| ARF domain class transcription factor [Malus x do... 431 e-118
>ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
Length = 740
Score = 500 bits (1288), Expect = e-139
Identities = 291/571 (50%), Positives = 353/571 (61%), Gaps = 18/571 (3%)
Frame = -2
Query: 2121 GGFSVPRRAAEDCFSPLDYKQQRPSQELVAKDLHGVEWKFKHIYRGQPRRHLLTTGWSAF 1942
GGFSVPRRAAEDCF PLDYKQQRPSQELVAKDLHG EW+F+HIYRGQPRRHLLTTGWSAF
Sbjct: 168 GGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAF 227
Query: 1941 VNNKKLVSGDAVLFLRGENGELRLGVRRASQFKGGFPFSMLCSESLRPSSLTAVARAVST 1762
VN KKLVSGDAVLFLRG +GELRLG+RRA+Q KG PF LCS+ L ++LTAV A+ST
Sbjct: 228 VNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNAIST 287
Query: 1761 KSVFQIYYSPRASPSEFVVPLHKFSKGFDHSFSIGARFKIRIESEDAAERRYTGLITGVS 1582
+SVF I Y+PRAS SEF++PL KFSK DHSFS G RFK+R+E+EDAAERRYTGLITG+S
Sbjct: 288 RSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGIS 347
Query: 1581 DLDPVRWPGSKWRCLSVRWDDDVELRRHNRVXXXXXXXXXXXXXXXXXXXXXSKRSRISL 1402
D+DPVRWPGSKWRCL VRW DD+E RHNRV SKR+RI L
Sbjct: 348 DMDPVRWPGSKWRCLLVRW-DDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGL 406
Query: 1401 --TKSDPPVPNGVGFLDFGDSLRFQKVLQGQEISEFNTPCNFTGLLNHLPAEMRRYFP-- 1234
T+ D VPNG+G DFG+S RFQKVLQGQEI FNTP + +H P+E+ R FP
Sbjct: 407 PGTRPDFSVPNGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEI-RCFPGS 465
Query: 1233 --XXXXXXXXXXXXXXXXSDISHNRIGFGESVGLHKVLQGQENYPKPQHGRAAVGNHVQA 1060
SDIS+ IGFGES HKVLQGQE +P P GRA N
Sbjct: 466 SCSGIAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHE 525
Query: 1059 D-----YDNVHRSVSGRGLSSILYSNDGALQLRTXXXXXXXXXXXVMFQQPSARVLYPHS 895
+ +D V S G +++ + L T +MFQQ S +S
Sbjct: 526 NGSFGIFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSSVLMFQQASTAAPNIYS 585
Query: 894 AYALNNQEKRE---HSNLFDAHEAFVDKLTLSTPYRCSNTVKDVQM--ISPLDLFNEHKQ 730
++ NNQEK + + + FD E + +KL TP RC +V+ ++ L NEH Q
Sbjct: 586 MHSANNQEKEQEISNRSSFDIPEVYGEKL---TPSRCELSVRGGGQGGMNFFGLLNEHNQ 642
Query: 729 IGVLHSSPPTVTEADSRSSPHYVPKNRSGCRLFGFPLTREIHVTNEEETIGTPFTVCSNL 550
+ V H P VT++ R S VP +S CRLFGF LT E + N+ + P V S+L
Sbjct: 643 LAVPH---PLVTQSAFRGSQDLVPTCKSSCRLFGFSLTEERSIGNK---VDNPTPVTSSL 696
Query: 549 DASSSPVAIRHSRLHAPKP--SKGFGGSYTE 463
+S +LH+ P +K G + T+
Sbjct: 697 IPGTS---FLPQQLHSEPPVMTKAIGSNCTK 724
>emb|CBI30623.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 472 bits (1214), Expect = e-130
Identities = 279/569 (49%), Positives = 336/569 (59%), Gaps = 16/569 (2%)
Frame = -2
Query: 2121 GGFSVPRRAAEDCFSPLDYKQQRPSQELVAKDLHGVEWKFKHIYRGQPRRHLLTTGWSAF 1942
GGFSVPRRAAEDCF PLDYKQQRPSQELVAKDLHG EW+F+HIYRGQPRRHLLTTGWSAF
Sbjct: 164 GGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAF 223
Query: 1941 VNNKKLVSGDAVLFLRGENGELRLGVRRASQFKGGFPFSMLCSESLRPSSLTAVARAVST 1762
VN KKLVSGDAVLFLRG +GELRLG+RRA+Q KG PF LCS+ L ++LTAV A+ST
Sbjct: 224 VNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNAIST 283
Query: 1761 KSVFQIYYSPRASPSEFVVPLHKFSKGFDHSFSIGARFKIRIESEDAAERRYTGLITGVS 1582
+SVF I Y+PRAS SEF++PL KFSK DHSFS G RFK+R+E+EDAAERRYTGLITG+S
Sbjct: 284 RSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGIS 343
Query: 1581 DLDPVRWPGSKWRCLSVRWDDDVELRRHNRVXXXXXXXXXXXXXXXXXXXXXSKRSRISL 1402
D+DPVRWPGSKWRCL VRW DD+E RHNRV SKR+RI L
Sbjct: 344 DMDPVRWPGSKWRCLLVRW-DDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGL 402
Query: 1401 --TKSDPPVPNGVGFLDFGDSLRFQKVLQGQEISEFNTPCNFTGLLNHLPAEMRRYFP-- 1234
T+ D VPNG+G DFG+S RFQKVLQGQEI FNTP + +H P+E+ R FP
Sbjct: 403 PGTRPDFSVPNGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEI-RCFPGS 461
Query: 1233 --XXXXXXXXXXXXXXXXSDISHNRIGFGESVGLHKVLQGQENYPKPQHGRAAVGNHVQA 1060
SDIS+ IGFGES HKVLQGQE +P P GRA N
Sbjct: 462 SCSGIAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHE 521
Query: 1059 D-----YDNVHRSVSGRGLSSILYSNDGALQLRTXXXXXXXXXXXVMFQQPSARVLYPHS 895
+ +D V S G +++ + L T +MFQQ S +S
Sbjct: 522 NGSFGIFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSSVLMFQQASTAAPNIYS 581
Query: 894 AYALNNQEKRE---HSNLFDAHEAFVDKLTLSTPYRCSNTVKDVQMISPLDLFNEHKQIG 724
++ NNQEK + + + FD E + +KL TP RC +V+
Sbjct: 582 MHSANNQEKEQEISNRSSFDIPEVYGEKL---TPSRCELSVRG----------------- 621
Query: 723 VLHSSPPTVTEADSRSSPHYVPKNRSGCRLFGFPLTREIHVTNEEETIGTPFTVCSNLDA 544
VP +S CRLFGF LT E + N+ + P V S+L
Sbjct: 622 -------------------GVPTCKSSCRLFGFSLTEERSIGNK---VDNPTPVTSSLIP 659
Query: 543 SSSPVAIRHSRLHAPKP--SKGFGGSYTE 463
+S +LH+ P +K G + T+
Sbjct: 660 GTS---FLPQQLHSEPPVMTKAIGSNCTK 685
>emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
Length = 831
Score = 469 bits (1207), Expect = e-129
Identities = 285/598 (47%), Positives = 346/598 (57%), Gaps = 45/598 (7%)
Frame = -2
Query: 2121 GGFSVPRRAAEDCFSPLDYKQQRPSQELVAKDLHGVEWKFKHIYRGQPRRHLLTTGWSAF 1942
GGFSVPRRAAEDCF PLDYKQQRPSQELVAKDLHG EW+F+HIYRGQPRRHLLTTGWSAF
Sbjct: 167 GGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAF 226
Query: 1941 VNNKKLVSGDAVLFLRGENGELRLGVRRASQFKGGFPFSMLCSESLRPSSLTAVARAVST 1762
VN KKLVSGDAVLFLRG +GELRLG+RRA+Q KG PF LCS+ L ++LTAV A+ST
Sbjct: 227 VNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNAIST 286
Query: 1761 KSVFQIYYSPRASPSEFVVPLHKFSKGFDHSFSIGARFKIRIESEDAAERRYTGLITGVS 1582
+SVF I Y+PRAS SEF++PL KFSK DHSFS G RFK+R+E+EDAAERRYTGLITG+S
Sbjct: 287 RSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGIS 346
Query: 1581 DLDPVRWPGSKWRC------------------------------LSVRWDDDVELRRHNR 1492
D+DPVRWPGSKWRC L VRW DD+E RHNR
Sbjct: 347 DMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRW-DDIEANRHNR 405
Query: 1491 VXXXXXXXXXXXXXXXXXXXXXSKRSRISL--TKSDPPVPNGVGFLDFGDSLRFQKVLQG 1318
V SKR+RI L T+ D VPNG+G DFG+S RFQKVLQG
Sbjct: 406 VSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSVPNGMGVSDFGESSRFQKVLQG 465
Query: 1317 QEISEFNTPCNFTGLLNHLPAEMRRYFP----XXXXXXXXXXXXXXXXSDISHNRIGFGE 1150
QEI FNTP + +H P+E+ R FP SDIS+ IGFGE
Sbjct: 466 QEIFGFNTPYDGVDTQDHHPSEI-RCFPGSSCSRIAAIGNGVRNPLGNSDISYKGIGFGE 524
Query: 1149 SVGLHKVLQGQENYPKPQHGRAAVGNHVQAD-----YDNVHRSVSGRGLSSILYSNDGAL 985
S HKVLQGQE +P P GRA N + +D V S G +++ +
Sbjct: 525 SFRFHKVLQGQETFPSPPCGRALSANQAHENGSFGIFDGVQVPTSRNGWPALVQGYNAHT 584
Query: 984 QLRTXXXXXXXXXXXVMFQQPSARVLYPHSAYALNNQEKREHSNLFDAHEAFVDKLTLST 805
L T PS +V P S+ + + + + FD E + +KL T
Sbjct: 585 HLST----------------PSVQVSSP-SSVLMRRSKXLSNRSSFDIPEVYGEKL---T 624
Query: 804 PYRCSNTVKDVQM--ISPLDLFNEHKQIGVLHSSPPTVTEADSRSSPHYVPKNRSGCRLF 631
P RC +V+ ++ L NEH Q+ V H P VT++ R S VP +S CRLF
Sbjct: 625 PSRCELSVRGGGQGGMNFFGLLNEHNQLAVPH---PLVTQSAFRGSQDLVPTCKSSCRLF 681
Query: 630 GFPLTREIHVTNEEETIGTPFTVCSNLDASSSPVAIRHSRLHAPKP--SKGFGGSYTE 463
GF LT E + N+ + P V S+L +S +LH+ P +K G + T+
Sbjct: 682 GFSLTEERSIGNK---VDNPTPVTSSLIPGTS---FLPQQLHSEPPVMTKAIGSNCTK 733
>ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
gi|223538189|gb|EEF39798.1| Auxin response factor,
putative [Ricinus communis]
Length = 730
Score = 444 bits (1142), Expect = e-122
Identities = 265/571 (46%), Positives = 326/571 (57%), Gaps = 14/571 (2%)
Frame = -2
Query: 2121 GGFSVPRRAAEDCFSPLDYKQQRPSQELVAKDLHGVEWKFKHIYRGQPRRHLLTTGWSAF 1942
GGFSVPRRAAEDCF PLDY QQRPSQELVAKDLHG EWKF+HIYRGQPRRHLLTTGWSAF
Sbjct: 171 GGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHIYRGQPRRHLLTTGWSAF 230
Query: 1941 VNNKKLVSGDAVLFLRGENGELRLGVRRASQFKGGFPFSMLCSESLRPSSLTAVARAVST 1762
VN KKLVSGDAVLFLRG++GELRLG+RRA+Q K G F LCS+ L S+LT V A+S
Sbjct: 231 VNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCSQQLNQSTLTDVVHAMSM 290
Query: 1761 KSVFQIYYSPRASPSEFVVPLHKFSKGFDHSFSIGARFKIRIESEDAAERRYTGLITGVS 1582
+S+F I Y+PRAS SEF++PLHKF K D+SFS+G RFK+R E+EDAAERRY GLITG+S
Sbjct: 291 RSLFNICYNPRASSSEFIIPLHKFLKSLDYSFSVGMRFKMRFETEDAAERRYMGLITGIS 350
Query: 1581 DLDPVRWPGSKWRCLSVRWDDDVELRRHNRVXXXXXXXXXXXXXXXXXXXXXSKRSRISL 1402
DLDP RWPGSKWRCL VRW DD+E RH+RV KRSR
Sbjct: 351 DLDPARWPGSKWRCLVVRW-DDMETNRHSRVSPWEIEPSGSVSSCNSFMTPGLKRSRSGF 409
Query: 1401 TKSDP--PVPNGVGFLDFGDSLRFQKVLQGQEISEFNTPCNFTGLLNHLPAEMRRYFP-- 1234
S P PVP+G+G DFG+ RFQKVLQGQEI FNT + H P+++RR FP
Sbjct: 410 PSSKPEFPVPDGIGASDFGEPSRFQKVLQGQEILNFNTLYDGVDQNRH-PSDIRRCFPGS 468
Query: 1233 --XXXXXXXXXXXXXXXXSDISHNRIGFGESVGLHKVLQGQENYPKPQHGRAAVGNHVQA 1060
SD+S+ IGF ES+ HKVLQGQE P GRA +
Sbjct: 469 RSSMIATTRNGARDPVVNSDVSYKSIGFSESLRFHKVLQGQEIIPSSPFGRAPASTNEAC 528
Query: 1059 D------YDNVHRSVSGRGLSSILYSNDGALQLRTXXXXXXXXXXXVMFQQPSARVLYPH 898
+ D V + S G SS++ + ++ +MFQQ S +V P
Sbjct: 529 ENGCFGISDGVQMTSSRNGWSSMMQGYNTRIR---PPAQVSSPCSVLMFQQASNQVSNPS 585
Query: 897 SAYALNNQEKR--EHSNLFDAHEAFVDKLTLSTPYRCSNTVKDVQMISPLDLFNEHKQIG 724
Y N+ E++ + F E +K S+ + + L +EH Q G
Sbjct: 586 PRYGFNDLEEQGVNTQSWFHNPETCGEKRMSSSRSEHIFRRNNQWGMDSFSLSHEHSQHG 645
Query: 723 VLHSSPPTVTEADSRSSPHYVPKNRSGCRLFGFPLTREIHVTNEEETIGTPFTVCSNLDA 544
+L P V + + V +S CRLFGF LT + HV N+++ + + S
Sbjct: 646 LLQ---PLVAQPPCKGGQDLVSSCKSSCRLFGFQLTEDRHVANKDD---SSIPMASLNAG 699
Query: 543 SSSPVAIRHSRLHAPKPSKGFGGSYTEAGQL 451
S P A L P + G S T+ L
Sbjct: 700 SFMPHAGEQFHLKPPAITNAVGSSCTKVSVL 730
>gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
Length = 712
Score = 431 bits (1109), Expect = e-118
Identities = 254/538 (47%), Positives = 314/538 (58%), Gaps = 20/538 (3%)
Frame = -2
Query: 2121 GGFSVPRRAAEDCFSPLDYKQQRPSQELVAKDLHGVEWKFKHIYRGQPRRHLLTTGWSAF 1942
GGFSVPRRAAEDCF PLDY QQRPSQELVAKDLHG+EW+F+HIYRGQPRRHLLTTGWSAF
Sbjct: 158 GGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAF 217
Query: 1941 VNNKKLVSGDAVLFLRGENGELRLGVRRASQFKGGFPFSMLCSESLRPSSLTAVARAVST 1762
VN KKLVSGDAVLFLRG++GELRLG+RRA+Q K LCS+ L S++T V AVST
Sbjct: 218 VNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLNYSTVTDVVNAVST 277
Query: 1761 KSVFQIYYSPRASPSEFVVPLHKFSKGFDHSFSIGARFKIRIESEDAAERRYTGLITGVS 1582
K+ F +YY+PRAS SEF++P KF + DH FS G RFK+R E+EDAAERRYTGLITG+
Sbjct: 278 KNAFNVYYNPRASSSEFIIPSRKFLRSLDHCFSAGMRFKMRFETEDAAERRYTGLITGIG 337
Query: 1581 DLDPVRWPGSKWRCLSVRWDDDVELRRHNRVXXXXXXXXXXXXXXXXXXXXXSKRSRISL 1402
LDP+RWPGSKW+CL VRW DD++ +H RV KRSRI L
Sbjct: 338 ALDPIRWPGSKWKCLVVRW-DDIDTSKHGRVSPWEIEPSGSVSSSHSLMGTGLKRSRIGL 396
Query: 1401 --TKSDPPVPNGVGFLDFGDSLRFQKVLQGQEISEFNTPCNFTGLLNHLPAEMRRYFP-- 1234
TK + PVPNG G DFG+SLRFQKVLQGQEIS F+TP + G+ N P+E RR F
Sbjct: 397 SATKPEFPVPNGNGASDFGESLRFQKVLQGQEISGFDTPFSGLGVQNPHPSEARRVFQGS 456
Query: 1233 --XXXXXXXXXXXXXXXXSDISHNRIGFGESVGLHKVLQGQENYPKPQHGRAAVGNHVQ- 1063
S+I+ IGFGES+ HKVLQGQE +P +GRA N
Sbjct: 457 GGSGIAAGSNGLRQSLVDSEIASKGIGFGESLRFHKVLQGQEIFPSSPYGRAPASNKAHE 516
Query: 1062 ----ADYDNVHRSVSGRGLSSILYSNDGALQLRTXXXXXXXXXXXVMFQQPSARVLYPHS 895
YD G S+++ SN+ + +MFQQ V +S
Sbjct: 517 YGGPGVYDGFQVPGFRNGWSTMMQSNNTQVHPSATSVQVSSPSSVLMFQQAINPVTEFNS 576
Query: 894 AYALNNQEKREHSNLFDAHEAFVDKLTLSTPY-------RCSNTVKDVQMISPLDLFNEH 736
Y +NQE EH ++ TPY R +++ + S D H
Sbjct: 577 VYNGHNQE--EH------------RVIHPTPYVSEYDGGRKTSSSFGERNFSREDHGGTH 622
Query: 735 --KQIGVLHSSPPTVTEADSRSSPHYVPKNRSGCRLFGFPLTREIHVTNEEETIGTPF 568
Q G+ S+ P ++ + S + + CRLFGF L+ + V ++ T G F
Sbjct: 623 SYNQHGI--SNDPVISRSTFSGSQDSISPTKGSCRLFGFSLSEDKCVPDQAPTAGVRF 678