BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013558
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530840.1| Pre-mRNA branch site protein p14, putative [...   162   3e-38
ref|XP_002299969.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002262884.1| PREDICTED: pre-mRNA branch site p14-like pro...   162   3e-38
ref|XP_003519509.1| PREDICTED: pre-mRNA branch site p14-like pro...   160   8e-38
ref|XP_003617230.1| Pre-mRNA branch site p14-like protein [Medic...   160   8e-38

>ref|XP_002530840.1| Pre-mRNA branch site protein p14, putative [Ricinus communis]
           gi|223529604|gb|EEF31553.1| Pre-mRNA branch site protein
           p14, putative [Ricinus communis]
          Length = 124

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = -2

Query: 237 RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGTNKDTRGTAFVVYED 58
           RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+GTNKDTRGTAFVVYED
Sbjct: 7   RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYED 66

Query: 57  IYDAKTAVDHLSGFNVANR 1
           IYDAKTAVDHLSGFNVANR
Sbjct: 67  IYDAKTAVDHLSGFNVANR 85


>ref|XP_002299969.1| predicted protein [Populus trichocarpa] gi|222847227|gb|EEE84774.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = -2

Query: 237 RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGTNKDTRGTAFVVYED 58
           RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+GTNKDTRGTAFVVYED
Sbjct: 8   RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYED 67

Query: 57  IYDAKTAVDHLSGFNVANR 1
           IYDAKTAVDHLSGFNVANR
Sbjct: 68  IYDAKTAVDHLSGFNVANR 86


>ref|XP_002262884.1| PREDICTED: pre-mRNA branch site p14-like protein [Vitis vinifera]
           gi|147809527|emb|CAN62387.1| hypothetical protein
           VITISV_037629 [Vitis vinifera]
           gi|147810953|emb|CAN67767.1| hypothetical protein
           VITISV_042768 [Vitis vinifera]
           gi|296083881|emb|CBI24269.3| unnamed protein product
           [Vitis vinifera]
          Length = 125

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = -2

Query: 237 RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGTNKDTRGTAFVVYED 58
           RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+GTNKDTRGTAFVVYED
Sbjct: 7   RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYED 66

Query: 57  IYDAKTAVDHLSGFNVANR 1
           IYDAKTAVDHLSGFNVANR
Sbjct: 67  IYDAKTAVDHLSGFNVANR 85


>ref|XP_003519509.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Glycine max]
          Length = 124

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/79 (97%), Positives = 79/79 (100%)
 Frame = -2

Query: 237 RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGTNKDTRGTAFVVYED 58
           RKGNTRLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIR+GTNKDTRGTAFVVYED
Sbjct: 7   RKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYED 66

Query: 57  IYDAKTAVDHLSGFNVANR 1
           IYDAKTAVDHLSGFNVANR
Sbjct: 67  IYDAKTAVDHLSGFNVANR 85


>ref|XP_003617230.1| Pre-mRNA branch site p14-like protein [Medicago truncatula]
           gi|355518565|gb|AET00189.1| Pre-mRNA branch site
           p14-like protein [Medicago truncatula]
          Length = 126

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/79 (97%), Positives = 79/79 (100%)
 Frame = -2

Query: 237 RKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGTNKDTRGTAFVVYED 58
           RKGNTRLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIR+GTNKDTRGTAFVVYED
Sbjct: 7   RKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYED 66

Query: 57  IYDAKTAVDHLSGFNVANR 1
           IYDAKTAVDHLSGFNVANR
Sbjct: 67  IYDAKTAVDHLSGFNVANR 85