BLASTX nr result

ID: Coptis24_contig00013556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013556
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325474.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-35
ref|XP_003543944.1| PREDICTED: biotin carboxyl carrier protein o...   145   1e-32
ref|NP_001241523.1| uncharacterized protein LOC100777962 [Glycin...   144   3e-32
gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha...   143   8e-32
gb|ABK26424.1| unknown [Picea sitchensis]                             140   5e-31

>ref|XP_002325474.1| predicted protein [Populus trichocarpa] gi|222862349|gb|EEE99855.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  154 bits (389), Expect = 3e-35
 Identities = 113/263 (42%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
 Frame = +3

Query: 285 HSSNVVSFSFSCPWVSKPKV------LQSKRNHSTVVKAQSNELAG-------------- 404
           H  +  SF  S     KPK+      LQ  RN + +VKAQ NE+A               
Sbjct: 27  HRLSTQSFRLS----QKPKLRFLAKGLQPTRNGTYLVKAQLNEVAVDGSSNAAASTLAKS 82

Query: 405 --PRIGKKDVK-----QXXXXXXXXXXXXFMARVSILIKLVDSRDIVELQLKQSDCELVI 563
             P    KD K                  F+++VS L+KLVDSRDIVELQLKQ DCEL+I
Sbjct: 83  EVPLQEAKDAKPSNEPSPPSLATEESISEFISQVSSLVKLVDSRDIVELQLKQLDCELLI 142

Query: 564 RKKEALXXXXXXXNNMVMMHS---PRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 734
           RKKEAL       + +VMMHS   P                                   
Sbjct: 143 RKKEALPLPPYH-SPVVMMHSHPPPPPPVMPAATPAASAAAPAAASSPSPSAISPSPPSK 201

Query: 735 XXXXXXXXLKCPMAGTFYRSPAPGEPXXXXXXXXXXXXXXXCIIEAMKLMNEIEADRTGT 914
                    KCPMAGTFYRSPAPGEP               CIIEAMKLMNEIEAD+TGT
Sbjct: 202 SVKSSLPPFKCPMAGTFYRSPAPGEPSFVKVGDKVQKGQVVCIIEAMKLMNEIEADQTGT 261

Query: 915 IVEILVDDGKPVSVDLPLFVIEP 983
           IVEIL +DGKPVSVD PLFVIEP
Sbjct: 262 IVEILAEDGKPVSVDTPLFVIEP 284


>ref|XP_003543944.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 2, chloroplastic-like [Glycine max]
          Length = 276

 Score =  145 bits (367), Expect = 1e-32
 Identities = 86/171 (50%), Positives = 96/171 (56%)
 Frame = +3

Query: 471 FMARVSILIKLVDSRDIVELQLKQSDCELVIRKKEALXXXXXXXNNMVMMHSPRXXXXXX 650
           FM++VS L+KLVDSRDIVELQLKQSDCEL+IRKKEAL         ++   SP       
Sbjct: 111 FMSQVSDLVKLVDSRDIVELQLKQSDCELMIRKKEALQPPP-----VIAPTSPPMHYATV 165

Query: 651 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCPMAGTFYRSPAPGEPXXXXXX 830
                                               LKCPMAGTFYRSPAPGEP      
Sbjct: 166 PSPPPPPAAAPASSAPPKAVPALPSPAKAGTSSHPTLKCPMAGTFYRSPAPGEPAFVKVG 225

Query: 831 XXXXXXXXXCIIEAMKLMNEIEADRTGTIVEILVDDGKPVSVDLPLFVIEP 983
                    CIIEAMKLMNEIEAD++GTI E+L +DGKPVSVD PLFVI P
Sbjct: 226 DKVQKGQVICIIEAMKLMNEIEADQSGTIAEVLAEDGKPVSVDTPLFVIVP 276


>ref|NP_001241523.1| uncharacterized protein LOC100777962 [Glycine max]
           gi|255645677|gb|ACU23332.1| unknown [Glycine max]
          Length = 280

 Score =  144 bits (364), Expect = 3e-32
 Identities = 86/171 (50%), Positives = 95/171 (55%)
 Frame = +3

Query: 471 FMARVSILIKLVDSRDIVELQLKQSDCELVIRKKEALXXXXXXXNNMVMMHSPRXXXXXX 650
           FM++VS L+KLVDSRDIVELQLKQSDCEL+IRKKEAL            MH         
Sbjct: 113 FMSQVSDLVKLVDSRDIVELQLKQSDCELMIRKKEALQPPPIIAPAPPPMH---YATFPS 169

Query: 651 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCPMAGTFYRSPAPGEPXXXXXX 830
                                               LKCPMAGTFYRSPAPGEP      
Sbjct: 170 PSSPLPAEAAPASSAPPKAAPALPSPGKASTSSHPPLKCPMAGTFYRSPAPGEPAFVKVG 229

Query: 831 XXXXXXXXXCIIEAMKLMNEIEADRTGTIVEILVDDGKPVSVDLPLFVIEP 983
                    CIIEAMKLMNEIEAD++GTI E+L +DGKPVSVD+PLFVI P
Sbjct: 230 DKVKKGQVICIIEAMKLMNEIEADQSGTIAEVLAEDGKPVSVDMPLFVIVP 280


>gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha curcas]
          Length = 270

 Score =  143 bits (360), Expect = 8e-32
 Identities = 98/242 (40%), Positives = 118/242 (48%), Gaps = 10/242 (4%)
 Frame = +3

Query: 288 SSNVVSFSFSCPW----VSKPK------VLQSKRNHSTVVKAQSNELAGPRIGKKDVKQX 437
           +SN++ F + C W    V+K +      +L+   N   V++  SN    P   +KD    
Sbjct: 36  TSNLLGFQW-CNWKQSRVTKMQAKLNEVLLEKSSNSVPVLETNSNV---PTPDEKDESTE 91

Query: 438 XXXXXXXXXXXFMARVSILIKLVDSRDIVELQLKQSDCELVIRKKEALXXXXXXXNNMVM 617
                      FM +VS L+KLVDSRDI ELQLKQ  C+L+IRKKEAL         + M
Sbjct: 92  SNILDASQISAFMTQVSDLVKLVDSRDITELQLKQLGCQLIIRKKEALQQPPPAAPVIAM 151

Query: 618 MHSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCPMAGTFYRSP 797
              P                                           LKCPMAGTFYR+P
Sbjct: 152 ---PPSYQHTMLPSPPPAAPASAPPSSPPLALALPPPAKTSSSSHPPLKCPMAGTFYRNP 208

Query: 798 APGEPXXXXXXXXXXXXXXXCIIEAMKLMNEIEADRTGTIVEILVDDGKPVSVDLPLFVI 977
           APGEP               CIIEAMKLMNEIEAD+ GTI EILV+DGKPVSVD+PLFVI
Sbjct: 209 APGEPPFVKVGDKVQKGQVVCIIEAMKLMNEIEADQAGTIAEILVEDGKPVSVDMPLFVI 268

Query: 978 EP 983
            P
Sbjct: 269 AP 270


>gb|ABK26424.1| unknown [Picea sitchensis]
          Length = 309

 Score =  140 bits (353), Expect = 5e-31
 Identities = 84/174 (48%), Positives = 98/174 (56%), Gaps = 3/174 (1%)
 Frame = +3

Query: 471 FMARVSILIKLVDSRDIVELQLKQSDCELVIRKKEALXXXXXXXNNMVMMHS---PRXXX 641
           FM+ V+ LIKLVDSRDI+ELQLKQ D E++IRKKEAL       +  VM+HS   P    
Sbjct: 137 FMSEVTDLIKLVDSRDIMELQLKQQDYEILIRKKEALPPPPSP-SPPVMVHSLYPPAPAP 195

Query: 642 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCPMAGTFYRSPAPGEPXXX 821
                                                   KCPMAGTFYRSP PG+P   
Sbjct: 196 LPSPAVAPNRPTYDLVPAGPSTPTQPEAPAKPEQSGHPSFKCPMAGTFYRSPGPGQPSFV 255

Query: 822 XXXXXXXXXXXXCIIEAMKLMNEIEADRTGTIVEILVDDGKPVSVDLPLFVIEP 983
                       CI+EAMKLMNEIEADR+GTIVEILV+DGKPV+VD+PLFVI+P
Sbjct: 256 KVGDKVQKGQVICIVEAMKLMNEIEADRSGTIVEILVEDGKPVAVDMPLFVIKP 309


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