BLASTX nr result
ID: Coptis24_contig00013556
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013556 (1018 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325474.1| predicted protein [Populus trichocarpa] gi|2... 154 3e-35 ref|XP_003543944.1| PREDICTED: biotin carboxyl carrier protein o... 145 1e-32 ref|NP_001241523.1| uncharacterized protein LOC100777962 [Glycin... 144 3e-32 gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha... 143 8e-32 gb|ABK26424.1| unknown [Picea sitchensis] 140 5e-31 >ref|XP_002325474.1| predicted protein [Populus trichocarpa] gi|222862349|gb|EEE99855.1| predicted protein [Populus trichocarpa] Length = 284 Score = 154 bits (389), Expect = 3e-35 Identities = 113/263 (42%), Positives = 127/263 (48%), Gaps = 30/263 (11%) Frame = +3 Query: 285 HSSNVVSFSFSCPWVSKPKV------LQSKRNHSTVVKAQSNELAG-------------- 404 H + SF S KPK+ LQ RN + +VKAQ NE+A Sbjct: 27 HRLSTQSFRLS----QKPKLRFLAKGLQPTRNGTYLVKAQLNEVAVDGSSNAAASTLAKS 82 Query: 405 --PRIGKKDVK-----QXXXXXXXXXXXXFMARVSILIKLVDSRDIVELQLKQSDCELVI 563 P KD K F+++VS L+KLVDSRDIVELQLKQ DCEL+I Sbjct: 83 EVPLQEAKDAKPSNEPSPPSLATEESISEFISQVSSLVKLVDSRDIVELQLKQLDCELLI 142 Query: 564 RKKEALXXXXXXXNNMVMMHS---PRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 734 RKKEAL + +VMMHS P Sbjct: 143 RKKEALPLPPYH-SPVVMMHSHPPPPPPVMPAATPAASAAAPAAASSPSPSAISPSPPSK 201 Query: 735 XXXXXXXXLKCPMAGTFYRSPAPGEPXXXXXXXXXXXXXXXCIIEAMKLMNEIEADRTGT 914 KCPMAGTFYRSPAPGEP CIIEAMKLMNEIEAD+TGT Sbjct: 202 SVKSSLPPFKCPMAGTFYRSPAPGEPSFVKVGDKVQKGQVVCIIEAMKLMNEIEADQTGT 261 Query: 915 IVEILVDDGKPVSVDLPLFVIEP 983 IVEIL +DGKPVSVD PLFVIEP Sbjct: 262 IVEILAEDGKPVSVDTPLFVIEP 284 >ref|XP_003543944.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic-like [Glycine max] Length = 276 Score = 145 bits (367), Expect = 1e-32 Identities = 86/171 (50%), Positives = 96/171 (56%) Frame = +3 Query: 471 FMARVSILIKLVDSRDIVELQLKQSDCELVIRKKEALXXXXXXXNNMVMMHSPRXXXXXX 650 FM++VS L+KLVDSRDIVELQLKQSDCEL+IRKKEAL ++ SP Sbjct: 111 FMSQVSDLVKLVDSRDIVELQLKQSDCELMIRKKEALQPPP-----VIAPTSPPMHYATV 165 Query: 651 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCPMAGTFYRSPAPGEPXXXXXX 830 LKCPMAGTFYRSPAPGEP Sbjct: 166 PSPPPPPAAAPASSAPPKAVPALPSPAKAGTSSHPTLKCPMAGTFYRSPAPGEPAFVKVG 225 Query: 831 XXXXXXXXXCIIEAMKLMNEIEADRTGTIVEILVDDGKPVSVDLPLFVIEP 983 CIIEAMKLMNEIEAD++GTI E+L +DGKPVSVD PLFVI P Sbjct: 226 DKVQKGQVICIIEAMKLMNEIEADQSGTIAEVLAEDGKPVSVDTPLFVIVP 276 >ref|NP_001241523.1| uncharacterized protein LOC100777962 [Glycine max] gi|255645677|gb|ACU23332.1| unknown [Glycine max] Length = 280 Score = 144 bits (364), Expect = 3e-32 Identities = 86/171 (50%), Positives = 95/171 (55%) Frame = +3 Query: 471 FMARVSILIKLVDSRDIVELQLKQSDCELVIRKKEALXXXXXXXNNMVMMHSPRXXXXXX 650 FM++VS L+KLVDSRDIVELQLKQSDCEL+IRKKEAL MH Sbjct: 113 FMSQVSDLVKLVDSRDIVELQLKQSDCELMIRKKEALQPPPIIAPAPPPMH---YATFPS 169 Query: 651 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCPMAGTFYRSPAPGEPXXXXXX 830 LKCPMAGTFYRSPAPGEP Sbjct: 170 PSSPLPAEAAPASSAPPKAAPALPSPGKASTSSHPPLKCPMAGTFYRSPAPGEPAFVKVG 229 Query: 831 XXXXXXXXXCIIEAMKLMNEIEADRTGTIVEILVDDGKPVSVDLPLFVIEP 983 CIIEAMKLMNEIEAD++GTI E+L +DGKPVSVD+PLFVI P Sbjct: 230 DKVKKGQVICIIEAMKLMNEIEADQSGTIAEVLAEDGKPVSVDMPLFVIVP 280 >gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha curcas] Length = 270 Score = 143 bits (360), Expect = 8e-32 Identities = 98/242 (40%), Positives = 118/242 (48%), Gaps = 10/242 (4%) Frame = +3 Query: 288 SSNVVSFSFSCPW----VSKPK------VLQSKRNHSTVVKAQSNELAGPRIGKKDVKQX 437 +SN++ F + C W V+K + +L+ N V++ SN P +KD Sbjct: 36 TSNLLGFQW-CNWKQSRVTKMQAKLNEVLLEKSSNSVPVLETNSNV---PTPDEKDESTE 91 Query: 438 XXXXXXXXXXXFMARVSILIKLVDSRDIVELQLKQSDCELVIRKKEALXXXXXXXNNMVM 617 FM +VS L+KLVDSRDI ELQLKQ C+L+IRKKEAL + M Sbjct: 92 SNILDASQISAFMTQVSDLVKLVDSRDITELQLKQLGCQLIIRKKEALQQPPPAAPVIAM 151 Query: 618 MHSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCPMAGTFYRSP 797 P LKCPMAGTFYR+P Sbjct: 152 ---PPSYQHTMLPSPPPAAPASAPPSSPPLALALPPPAKTSSSSHPPLKCPMAGTFYRNP 208 Query: 798 APGEPXXXXXXXXXXXXXXXCIIEAMKLMNEIEADRTGTIVEILVDDGKPVSVDLPLFVI 977 APGEP CIIEAMKLMNEIEAD+ GTI EILV+DGKPVSVD+PLFVI Sbjct: 209 APGEPPFVKVGDKVQKGQVVCIIEAMKLMNEIEADQAGTIAEILVEDGKPVSVDMPLFVI 268 Query: 978 EP 983 P Sbjct: 269 AP 270 >gb|ABK26424.1| unknown [Picea sitchensis] Length = 309 Score = 140 bits (353), Expect = 5e-31 Identities = 84/174 (48%), Positives = 98/174 (56%), Gaps = 3/174 (1%) Frame = +3 Query: 471 FMARVSILIKLVDSRDIVELQLKQSDCELVIRKKEALXXXXXXXNNMVMMHS---PRXXX 641 FM+ V+ LIKLVDSRDI+ELQLKQ D E++IRKKEAL + VM+HS P Sbjct: 137 FMSEVTDLIKLVDSRDIMELQLKQQDYEILIRKKEALPPPPSP-SPPVMVHSLYPPAPAP 195 Query: 642 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCPMAGTFYRSPAPGEPXXX 821 KCPMAGTFYRSP PG+P Sbjct: 196 LPSPAVAPNRPTYDLVPAGPSTPTQPEAPAKPEQSGHPSFKCPMAGTFYRSPGPGQPSFV 255 Query: 822 XXXXXXXXXXXXCIIEAMKLMNEIEADRTGTIVEILVDDGKPVSVDLPLFVIEP 983 CI+EAMKLMNEIEADR+GTIVEILV+DGKPV+VD+PLFVI+P Sbjct: 256 KVGDKVQKGQVICIVEAMKLMNEIEADRSGTIVEILVEDGKPVAVDMPLFVIKP 309