BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013546
         (1686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27690.3| unnamed protein product [Vitis vinifera]              619   e-174
ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|2...   617   e-174
ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...   616   e-174
ref|XP_004146401.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...   554   e-155
ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago t...   550   e-154

>emb|CBI27690.3| unnamed protein product [Vitis vinifera]
          Length = 1150

 Score =  619 bits (1595), Expect = e-174
 Identities = 295/464 (63%), Positives = 356/464 (76%), Gaps = 3/464 (0%)
 Frame = -3

Query: 1606 VKLEPGESSDKPVTEP--WAKLVRLDSKQVDIEIRVDEMVICSENKLLSIGERGWCKITR 1433
            +K+E GESS    ++   WAKLV  DS+  ++E+R+DEMVICS+    S  ++ WCK+TR
Sbjct: 687  MKMEFGESSAANPSQEIVWAKLVPSDSRYSEVELRLDEMVICSDVMFPSFDKQEWCKVTR 746

Query: 1432 NSDLCSGTLQNLSSTALLVDGTCVEXXXXXXXKCGTEIISGLDKEGYLSYRFRVMAVPEG 1253
            NSD CS T+QN SS  +LVD   +        KCG+EII G   EGYLSYRF VM+  E 
Sbjct: 747  NSDQCSATIQNKSSNTILVDEVAIPSEDSIVIKCGSEIIPGPKNEGYLSYRFEVMSPQES 806

Query: 1252 YWKHLKIPIDSEHAKCSICLHIWHDVVTVAPCLHNFCNGCFSEWLKRSQKENPTIPCPQC 1073
              + LKI +D EHAKCSICL+IWHDVVTVAPCLHNFCNGCFSEWL+RSQ ++  + CPQC
Sbjct: 807  IKEQLKICLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQNKHSNVLCPQC 866

Query: 1072 RADVHFVGRNHFLRNIEEGILESDLSLKRSNDELALLDGCASIQSNLVMRTGKLLCRKRP 893
            RA V FVGRNHFLR IEE IL++D SL+RS++E+A+L+  ASIQSNLV++TG  L RKR 
Sbjct: 867  RAIVQFVGRNHFLRTIEETILQADPSLRRSDEEVAVLESHASIQSNLVLKTGTKLGRKRA 926

Query: 892  HSPPSEE-ETVELPCLQCGSRFGGFQCNQSTSHLQCQACGGMMPARTDISVPQHCVGCDR 716
            HS  +EE E +E PC QCG+ + GF CN +T HLQC ACGGMMP+R DI VPQHC+GCDR
Sbjct: 927  HSSLNEESEELEFPCPQCGAEYAGFLCNPNTVHLQCHACGGMMPSRNDIGVPQHCLGCDR 986

Query: 715  AFCWAYWRAQGVLPSDSNTVCCRENFKPISGHFVTRIPLLTHQSNRFEQDITERCIRQTG 536
            AFC AYW  Q    SDS+ VCC E FKPIS H ++RIP L H++N  EQ+ITERCIRQ G
Sbjct: 987  AFCGAYWHTQRFGGSDSHPVCCHETFKPISDHTISRIPTLAHENNWHEQNITERCIRQMG 1046

Query: 535  KTLQELISDWILKLDKREIDRTRMPLNHAEMITSGTHVCNECYDKLVSFLLYWFRITTRG 356
            KTLQ++IS+ +++L  REIDRTRM LNH+EMIT+ T+VCNECYDKLVSFLLYWFR++   
Sbjct: 1047 KTLQDVISELLIRLSNREIDRTRMQLNHSEMITASTYVCNECYDKLVSFLLYWFRVSMPK 1106

Query: 355  FALPPDVSAREDCWYGHACRTQNHSEEHARKRNHVCRPTRGSGM 224
              LPPD S REDCWYG+ACRTQ H+EEHARKRNHVCRPTRGS M
Sbjct: 1107 SFLPPDASKREDCWYGYACRTQQHNEEHARKRNHVCRPTRGSNM 1150


>ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|222871849|gb|EEF08980.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  617 bits (1590), Expect = e-174
 Identities = 290/455 (63%), Positives = 353/455 (77%), Gaps = 3/455 (0%)
 Frame = -3

Query: 1585 SSDKPVTEPWAKLVRLDSKQVDIEIRVDEMVICSENKLLSIGERGWCKITRNSDLCSGTL 1406
            S+     E WAKLV  DS+  D+EIR +EMVICSE    S+ +  WCKITRNSD  S  +
Sbjct: 10   SNSSSSNEAWAKLVPSDSRYSDVEIRSNEMVICSEITSTSLEKHEWCKITRNSDQSSAMM 69

Query: 1405 QNLSSTALLVDGTCVEXXXXXXXKCGTEIISGLDKEGYLSYRFRVMAVPEGYWKHLKIPI 1226
            QN S   +LVD   V+        CG+EII G  +EGYLSYRF++M   E + + LK+ I
Sbjct: 70   QNKSLNTILVDEATVQNEDDVVINCGSEIIPGPAREGYLSYRFKLMP-RESFTRWLKVSI 128

Query: 1225 DSEHAKCSICLHIWHDVVTVAPCLHNFCNGCFSEWLKRSQKENPTIPCPQCRADVHFVGR 1046
            D+EHAKCSICL++WHDVVTVAPCLHNFCNGCFSEWL+RSQ+ + ++ CPQCRA V FVGR
Sbjct: 129  DAEHAKCSICLNVWHDVVTVAPCLHNFCNGCFSEWLRRSQERHASVLCPQCRAVVQFVGR 188

Query: 1045 NHFLRNIEEGILESDLSLKRSNDELALLDGCASIQSNLVMRTGKLLCRKRPHSP-PSEEE 869
            NHFL +IEE +L++D SLK+S++E+ LLD  ASI+SNL+++TGK   RKRPHS   +E E
Sbjct: 189  NHFLHSIEEDVLQADSSLKQSDEEIILLDSYASIKSNLIIQTGKKHRRKRPHSILDAENE 248

Query: 868  TVELPCLQCGSRFGGFQCNQSTSHLQCQACGGMMPARTDISVPQHCV--GCDRAFCWAYW 695
              + PC QCG+ + GF CNQ+T HLQCQACGGMMP+R DI VPQHC+  GCDR FC AYW
Sbjct: 249  VADFPCPQCGTEYSGFHCNQNTIHLQCQACGGMMPSRADIGVPQHCMCLGCDRVFCGAYW 308

Query: 694  RAQGVLPSDSNTVCCRENFKPISGHFVTRIPLLTHQSNRFEQDITERCIRQTGKTLQELI 515
             AQGV  SD++++C  ENFKPIS H V+RIP L H+ NR EQDITERCI Q GKTLQ++I
Sbjct: 309  HAQGVSRSDTHSICSHENFKPISEHAVSRIPFLAHEKNRHEQDITERCIGQMGKTLQDVI 368

Query: 514  SDWILKLDKREIDRTRMPLNHAEMITSGTHVCNECYDKLVSFLLYWFRITTRGFALPPDV 335
            SDWI KL+ REIDR+RMPLNHAEMIT GTHVCN+CYDKL+SFLLYWFRI+     LPP+ 
Sbjct: 369  SDWIGKLNNREIDRSRMPLNHAEMITVGTHVCNDCYDKLISFLLYWFRISMPRNLLPPEA 428

Query: 334  SAREDCWYGHACRTQNHSEEHARKRNHVCRPTRGS 230
            + REDCWYG+ACRTQ+H+E+HARKRNHVCRPTRG+
Sbjct: 429  ANREDCWYGYACRTQHHNEDHARKRNHVCRPTRGN 463


>ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Vitis vinifera]
          Length = 462

 Score =  616 bits (1589), Expect = e-174
 Identities = 294/462 (63%), Positives = 354/462 (76%), Gaps = 3/462 (0%)
 Frame = -3

Query: 1600 LEPGESSDKPVTEP--WAKLVRLDSKQVDIEIRVDEMVICSENKLLSIGERGWCKITRNS 1427
            +E GESS    ++   WAKLV  DS+  ++E+R+DEMVICS+    S  ++ WCK+TRNS
Sbjct: 1    MEFGESSAANPSQEIVWAKLVPSDSRYSEVELRLDEMVICSDVMFPSFDKQEWCKVTRNS 60

Query: 1426 DLCSGTLQNLSSTALLVDGTCVEXXXXXXXKCGTEIISGLDKEGYLSYRFRVMAVPEGYW 1247
            D CS T+QN SS  +LVD   +        KCG+EII G   EGYLSYRF VM+  E   
Sbjct: 61   DQCSATIQNKSSNTILVDEVAIPSEDSIVIKCGSEIIPGPKNEGYLSYRFEVMSPQESIK 120

Query: 1246 KHLKIPIDSEHAKCSICLHIWHDVVTVAPCLHNFCNGCFSEWLKRSQKENPTIPCPQCRA 1067
            + LKI +D EHAKCSICL+IWHDVVTVAPCLHNFCNGCFSEWL+RSQ ++  + CPQCRA
Sbjct: 121  EQLKICLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQNKHSNVLCPQCRA 180

Query: 1066 DVHFVGRNHFLRNIEEGILESDLSLKRSNDELALLDGCASIQSNLVMRTGKLLCRKRPHS 887
             V FVGRNHFLR IEE IL++D SL+RS++E+A+L+  ASIQSNLV++TG  L RKR HS
Sbjct: 181  IVQFVGRNHFLRTIEETILQADPSLRRSDEEVAVLESHASIQSNLVLKTGTKLGRKRAHS 240

Query: 886  PPSEE-ETVELPCLQCGSRFGGFQCNQSTSHLQCQACGGMMPARTDISVPQHCVGCDRAF 710
              +EE E +E PC QCG+ + GF CN +T HLQC ACGGMMP+R DI VPQHC+GCDRAF
Sbjct: 241  SLNEESEELEFPCPQCGAEYAGFLCNPNTVHLQCHACGGMMPSRNDIGVPQHCLGCDRAF 300

Query: 709  CWAYWRAQGVLPSDSNTVCCRENFKPISGHFVTRIPLLTHQSNRFEQDITERCIRQTGKT 530
            C AYW  Q    SDS+ VCC E FKPIS H ++RIP L H++N  EQ+ITERCIRQ GKT
Sbjct: 301  CGAYWHTQRFGGSDSHPVCCHETFKPISDHTISRIPTLAHENNWHEQNITERCIRQMGKT 360

Query: 529  LQELISDWILKLDKREIDRTRMPLNHAEMITSGTHVCNECYDKLVSFLLYWFRITTRGFA 350
            LQ++IS+ +++L  REIDRTRM LNH+EMIT+ T+VCNECYDKLVSFLLYWFR++     
Sbjct: 361  LQDVISELLIRLSNREIDRTRMQLNHSEMITASTYVCNECYDKLVSFLLYWFRVSMPKSF 420

Query: 349  LPPDVSAREDCWYGHACRTQNHSEEHARKRNHVCRPTRGSGM 224
            LPPD S REDCWYG+ACRTQ H+EEHARKRNHVCRPTRGS M
Sbjct: 421  LPPDASKREDCWYGYACRTQQHNEEHARKRNHVCRPTRGSNM 462


>ref|XP_004146401.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Cucumis sativus]
          Length = 435

 Score =  554 bits (1427), Expect = e-155
 Identities = 263/431 (61%), Positives = 325/431 (75%), Gaps = 2/431 (0%)
 Frame = -3

Query: 1522 DIEIRVDEMVICSENKLLSIGERGWCKITRNSDLCSGTLQNLSSTALLVDGTCVEXXXXX 1343
            DIEI  DE VI SE K  S+ +  WCKITRNSDL + TLQN SS A++VD T V+     
Sbjct: 4    DIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNRSSNAIIVDETLVQKDETT 63

Query: 1342 XXKCGTEIISGLDKEGYLSYRFRVMAVPEGYWKHLKIPIDSEHAKCSICLHIWHDVVTVA 1163
              KCG+EI+SG  ++G LS++F +++  +   K LKI +D EHAKCSICL+IWHDVVT A
Sbjct: 64   FIKCGSEIVSGPVRDGNLSFKFEMLSDSK-LCKGLKISVDVEHAKCSICLNIWHDVVTAA 122

Query: 1162 PCLHNFCNGCFSEWLKRSQKENPTIPCPQCRADVHFVGRNHFLRNIEEGILESDLSLKRS 983
            PC HNFCNGCFSEWLKRSQ+++  + CPQCRA V FVGRNH+L NI E IL++D SL+RS
Sbjct: 123  PCFHNFCNGCFSEWLKRSQEKHTNVLCPQCRAVVQFVGRNHYLLNIAEDILQADSSLRRS 182

Query: 982  NDELALLDGCASIQSNLVMRTGKLLCRKRPHSPPSEEET--VELPCLQCGSRFGGFQCNQ 809
             +E+A LD C+ IQSNLV+ + K   +KRPH     EE+  +ELPC QCG+ + GF+CN 
Sbjct: 183  VEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNP 242

Query: 808  STSHLQCQACGGMMPARTDISVPQHCVGCDRAFCWAYWRAQGVLPSDSNTVCCRENFKPI 629
               HLQC  CGGMMP+R D  +PQHC+GCDRAFC AYW AQ +  SD    C  E FKPI
Sbjct: 243  HMVHLQCHECGGMMPSRFDTGIPQHCLGCDRAFCGAYWEAQSLQRSDIYATCSPETFKPI 302

Query: 628  SGHFVTRIPLLTHQSNRFEQDITERCIRQTGKTLQELISDWILKLDKREIDRTRMPLNHA 449
            S   ++RIP LTH++NR EQDIT RCI Q GKTLQ++IS+WI++   REIDRTRMPLNHA
Sbjct: 303  SRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREIDRTRMPLNHA 362

Query: 448  EMITSGTHVCNECYDKLVSFLLYWFRITTRGFALPPDVSAREDCWYGHACRTQNHSEEHA 269
            EMIT+ T +C+ECY+KLV FLLYWFRI+T  + LP D + RE+CWYG+ACRTQ+H+E+HA
Sbjct: 363  EMITAETPICHECYEKLVGFLLYWFRISTPKYLLPEDATERENCWYGYACRTQHHNEDHA 422

Query: 268  RKRNHVCRPTR 236
            RKRNHVCRPTR
Sbjct: 423  RKRNHVCRPTR 433


>ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago truncatula]
            gi|355524447|gb|AET04901.1| E3 ubiquitin-protein ligase
            CHFR [Medicago truncatula]
          Length = 471

 Score =  550 bits (1417), Expect = e-154
 Identities = 270/455 (59%), Positives = 335/455 (73%), Gaps = 3/455 (0%)
 Frame = -3

Query: 1585 SSDKPVTEPWAKLVRLDSKQVDIEIRVDEMVICSENKLLSIGERGWCKITRNSDLCSGTL 1406
            +S KP  E WAKLV+ DS+  D+EIR D+  I SE    S  +  WCKI RNSDLCS TL
Sbjct: 16   ASAKPSDEIWAKLVQSDSRYPDVEIRSDKGQIRSEISTASCDKHRWCKIVRNSDLCSATL 75

Query: 1405 QNLSSTALLVDGTCVEXXXXXXXKCGTEIISGLDKEGYLSYRFRVMAVPEGYWKHLKIPI 1226
            +N SS  +LVDG  V        K  +EII G  KEG++SY+F++++ PE     LKI +
Sbjct: 76   KNKSSNTILVDGAEVGKGDTVVIKDRSEIIPGPAKEGFVSYKFQIVSSPEICQTLLKICV 135

Query: 1225 DSEHAKCSICLHIWHDVVTVAPCLHNFCNGCFSEWLKRSQKENPTIPCPQCRADVHFVGR 1046
            D +HAKCSICL+IWHDVVTVAPCLHNFCNGCFSEWL+RSQ++  T+ CPQCRA V FVG+
Sbjct: 136  DVDHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVGK 195

Query: 1045 NHFLRNIEEGILESDLSLKRSNDELALLDGCASIQSNLVMRTGKLLCRKRPHSPPSEEET 866
            NHFLR I E ++++D SL+RS+DE+ALLD  AS++SNLV+ +GK   RKR  +  +    
Sbjct: 196  NHFLRTIAEDMVKADSSLRRSHDEVALLDTYASVRSNLVIGSGKK-SRKRERANTTMVNQ 254

Query: 865  VELP---CLQCGSRFGGFQCNQSTSHLQCQACGGMMPARTDISVPQHCVGCDRAFCWAYW 695
             + P   C QC +  GGFQC+ ST HLQCQ CGGMMP+RT + VPQ+C+GCDR FC AYW
Sbjct: 255  SDGPDHHCSQCVTVVGGFQCDPSTIHLQCQECGGMMPSRTGLGVPQYCLGCDRPFCGAYW 314

Query: 694  RAQGVLPSDSNTVCCRENFKPISGHFVTRIPLLTHQSNRFEQDITERCIRQTGKTLQELI 515
             A GV  S S  VC  +  +PIS H ++ IPL+ H+ N  EQ+ITE CIRQ G+TLQ++I
Sbjct: 315  SALGVTGSGSYPVCSPDTLRPISEHTISGIPLVAHEKNLHEQNITESCIRQMGRTLQDVI 374

Query: 514  SDWILKLDKREIDRTRMPLNHAEMITSGTHVCNECYDKLVSFLLYWFRITTRGFALPPDV 335
            S+WI KL+ REID TR+ LNHAEM+T+GT VC++CY KLVSF LYWFRI+T    LPP+ 
Sbjct: 375  SEWIAKLNNREIDTTRLMLNHAEMMTAGTLVCSDCYQKLVSFFLYWFRISTPKHLLPPEA 434

Query: 334  SAREDCWYGHACRTQNHSEEHARKRNHVCRPTRGS 230
            S REDCWYG+ACRTQ+ SEEHARKRNHVCRPTRGS
Sbjct: 435  STREDCWYGYACRTQHRSEEHARKRNHVCRPTRGS 469