BLASTX nr result

ID: Coptis24_contig00013543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013543
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266003.1| PREDICTED: GEM-like protein 4-like isoform 1...   243   3e-62
emb|CAN83539.1| hypothetical protein VITISV_021330 [Vitis vinifera]   240   2e-61
emb|CBI17660.3| unnamed protein product [Vitis vinifera]              239   3e-61
ref|XP_002264731.1| PREDICTED: GEM-like protein 4 [Vitis vinifer...   239   3e-61
ref|XP_002273098.1| PREDICTED: GEM-like protein 4 [Vitis vinifera]    239   3e-61

>ref|XP_002266003.1| PREDICTED: GEM-like protein 4-like isoform 1 [Vitis vinifera]
          Length = 228

 Score =  243 bits (619), Expect = 3e-62
 Identities = 116/159 (72%), Positives = 140/159 (88%)
 Frame = +2

Query: 155 SFTDGMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQLFSVNEEEKLLKVSQCYF 334
           SF   +REHV+LGPK+ +TVK KLSLGARI+Q GG  K+F+ +FSVNE E+LLK SQCY 
Sbjct: 70  SFAFRVREHVRLGPKLSETVKGKLSLGARIIQEGGREKIFKHIFSVNEGEELLKASQCYL 129

Query: 335 STTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVIIPLRKIKRATQSENVNK 514
           STTAGPIAGLLFISTEKVAFCSE+S++LTSPSGE+VR+PYKV+IP+RKIKRA QSENVNK
Sbjct: 130 STTAGPIAGLLFISTEKVAFCSERSISLTSPSGEIVRSPYKVLIPVRKIKRANQSENVNK 189

Query: 515 PTQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQHS 631
           P QKY+EIVT D F+FWFMGF+ Y+KAFK L++AIS ++
Sbjct: 190 PAQKYIEIVTTDGFEFWFMGFLRYEKAFKNLEKAISMYN 228


>emb|CAN83539.1| hypothetical protein VITISV_021330 [Vitis vinifera]
          Length = 258

 Score =  240 bits (612), Expect = 2e-61
 Identities = 125/187 (66%), Positives = 146/187 (78%), Gaps = 4/187 (2%)
 Frame = +2

Query: 104 KFNMKNPVPDQAYEFPSSFTDGMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQL 283
           K N  N   +   +   +F DG+REHV+LG K  +TVK KLSLGARI+Q GGV +VF+Q 
Sbjct: 34  KMNSMNYRMNNNRKKADNFVDGVREHVRLGLKFSETVKGKLSLGARILQIGGVKRVFKQN 93

Query: 284 FSVNEEEKLLKVSQCYFSTTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVI 463
           F V E EKLLKVSQCY STTAGPIAGLLFIST++VAFCSE+S+  +SP+GELVR  YKV 
Sbjct: 94  FGVREGEKLLKVSQCYLSTTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVS 153

Query: 464 IPLRKIKRATQSENVNKPTQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQ----HS 631
           IPLRKIKRA Q ENV KP+QKY+EIVT+DNFDFWFMGF+NYQKAF YL+QAISQ    H 
Sbjct: 154 IPLRKIKRANQGENVKKPSQKYMEIVTMDNFDFWFMGFLNYQKAFSYLRQAISQTWNWHI 213

Query: 632 *IAKHLD 652
             A H+D
Sbjct: 214 YGAGHID 220


>emb|CBI17660.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score =  239 bits (611), Expect = 3e-61
 Identities = 122/174 (70%), Positives = 141/174 (81%)
 Frame = +2

Query: 104 KFNMKNPVPDQAYEFPSSFTDGMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQL 283
           K N  N   +   +   +F DG+REHV+LG K  +TVK KLSLGARI+Q GG+ +VFRQ 
Sbjct: 34  KMNSMNYKMNNNRKKADNFVDGVREHVRLGLKFSETVKGKLSLGARILQIGGMKRVFRQN 93

Query: 284 FSVNEEEKLLKVSQCYFSTTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVI 463
           F V E EKLLKVSQCY STTAGPIAGLLFIST++VAFCSE+S+  +SP+GELVR  YKV 
Sbjct: 94  FGVREGEKLLKVSQCYLSTTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVS 153

Query: 464 IPLRKIKRATQSENVNKPTQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQ 625
           IPLRKIKRA QSENV KP+QKY+EIVTVDNFDFWFM F+NYQKAF YL+QAISQ
Sbjct: 154 IPLRKIKRANQSENVKKPSQKYMEIVTVDNFDFWFMRFLNYQKAFSYLRQAISQ 207


>ref|XP_002264731.1| PREDICTED: GEM-like protein 4 [Vitis vinifera]
           gi|296083042|emb|CBI22446.3| unnamed protein product
           [Vitis vinifera]
          Length = 214

 Score =  239 bits (611), Expect = 3e-61
 Identities = 121/174 (69%), Positives = 141/174 (81%)
 Frame = +2

Query: 104 KFNMKNPVPDQAYEFPSSFTDGMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQL 283
           K N  N   +   +   +F DG+REHV+LG K  +TVK KLSLGARI+Q GGV +VF+Q 
Sbjct: 34  KMNSMNYRMNNNRKKADNFVDGVREHVRLGLKFSETVKGKLSLGARILQIGGVKRVFKQN 93

Query: 284 FSVNEEEKLLKVSQCYFSTTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVI 463
           F V E EKLLKVSQCY STTAGPIAGLLFIST++VAFCSE+S+  +SP+GELVR  YKV 
Sbjct: 94  FGVREGEKLLKVSQCYLSTTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVS 153

Query: 464 IPLRKIKRATQSENVNKPTQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQ 625
           IPLRKIKRA Q ENV KP+QKY+EIVT+DNFDFWFMGF+NYQKAF YL+QAISQ
Sbjct: 154 IPLRKIKRANQGENVKKPSQKYMEIVTMDNFDFWFMGFLNYQKAFSYLRQAISQ 207


>ref|XP_002273098.1| PREDICTED: GEM-like protein 4 [Vitis vinifera]
          Length = 189

 Score =  239 bits (611), Expect = 3e-61
 Identities = 122/174 (70%), Positives = 141/174 (81%)
 Frame = +2

Query: 104 KFNMKNPVPDQAYEFPSSFTDGMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQL 283
           K N  N   +   +   +F DG+REHV+LG K  +TVK KLSLGARI+Q GG+ +VFRQ 
Sbjct: 9   KMNSMNYKMNNNRKKADNFVDGVREHVRLGLKFSETVKGKLSLGARILQIGGMKRVFRQN 68

Query: 284 FSVNEEEKLLKVSQCYFSTTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVI 463
           F V E EKLLKVSQCY STTAGPIAGLLFIST++VAFCSE+S+  +SP+GELVR  YKV 
Sbjct: 69  FGVREGEKLLKVSQCYLSTTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVS 128

Query: 464 IPLRKIKRATQSENVNKPTQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQ 625
           IPLRKIKRA QSENV KP+QKY+EIVTVDNFDFWFM F+NYQKAF YL+QAISQ
Sbjct: 129 IPLRKIKRANQSENVKKPSQKYMEIVTVDNFDFWFMRFLNYQKAFSYLRQAISQ 182


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