BLASTX nr result

ID: Coptis24_contig00013526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013526
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523550.1| peptidyl-prolyl cis-trans isomerase, putativ...   376   e-102
ref|XP_002309317.1| predicted protein [Populus trichocarpa] gi|2...   366   6e-99
ref|XP_003535048.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   360   3e-97
ref|XP_003546604.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   356   5e-96
ref|XP_002267887.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   356   5e-96

>ref|XP_002523550.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
           gi|223537257|gb|EEF38889.1| peptidyl-prolyl cis-trans
           isomerase, putative [Ricinus communis]
          Length = 296

 Score =  376 bits (965), Expect = e-102
 Identities = 180/238 (75%), Positives = 205/238 (86%)
 Frame = +1

Query: 208 QPDVTITDRVYIDLSICPNYFRPDRTLGDDEYTACEETEPLGRVVIGLYGKQVPLTVSNF 387
           QPD TITDRVY+D S+CPNYFRPDRTL D   + C E+ PLGRV++GLYG+ VPLTVSNF
Sbjct: 55  QPDTTITDRVYMDFSLCPNYFRPDRTLSDTVSSLCTESTPLGRVILGLYGRLVPLTVSNF 114

Query: 388 KQMCIGTSTGSSYKGTLVHKIFPGEYFIAGKQGRRDKGEVKPPYDQLARNTETVESRAFL 567
           K MC    T SSYK TLVHKIFPG++F+AG+QGRRDKGEV+ P + L RNTETV+S+AF 
Sbjct: 115 KTMC----TSSSYKNTLVHKIFPGQFFLAGRQGRRDKGEVRVPLE-LVRNTETVDSKAFK 169

Query: 568 LQHSRPGVVSLCLSENDDEDEIKLDPEYRNVEFLITTGPAPTPQLDGRNIVFGTVLEGLD 747
           L HSRPG+VSLCLSENDDED++KLDP YRNVEFLITTGP P+PQLD +NIVFG VLEGLD
Sbjct: 170 LTHSRPGIVSLCLSENDDEDDVKLDPNYRNVEFLITTGPGPSPQLDSKNIVFGVVLEGLD 229

Query: 748 VVTTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGELKVAK 921
           VVT IA+IPTYKPS+RIRQFNDLA F GDERAQ+AR+ WNRPLKTV+ISDCGEL V K
Sbjct: 230 VVTAIASIPTYKPSERIRQFNDLASFLGDERAQNARSSWNRPLKTVFISDCGELNVTK 287


>ref|XP_002309317.1| predicted protein [Populus trichocarpa] gi|222855293|gb|EEE92840.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  366 bits (939), Expect = 6e-99
 Identities = 180/236 (76%), Positives = 202/236 (85%)
 Frame = +1

Query: 214 DVTITDRVYIDLSICPNYFRPDRTLGDDEYTACEETEPLGRVVIGLYGKQVPLTVSNFKQ 393
           D TITDRV++D SIC NYFRPDRTL D   T C ++ PLGR+V+GLYG  VPLTVSNFK 
Sbjct: 30  DTTITDRVFLDFSICSNYFRPDRTLSDTFSTLCTDSTPLGRLVLGLYGHLVPLTVSNFKT 89

Query: 394 MCIGTSTGSSYKGTLVHKIFPGEYFIAGKQGRRDKGEVKPPYDQLARNTETVESRAFLLQ 573
           MC    T  SYK TLVHKIFPG++F+AG+QGRR+KGEVK P D LARN E+V+S+AF L 
Sbjct: 90  MC----TSYSYKNTLVHKIFPGQFFLAGRQGRREKGEVKVPQD-LARNIESVDSKAFKLT 144

Query: 574 HSRPGVVSLCLSENDDEDEIKLDPEYRNVEFLITTGPAPTPQLDGRNIVFGTVLEGLDVV 753
           HS PG++SLCLSENDDED IKL+PEYRNVEFLITTGP P PQLD +NIVFG VLEGLDVV
Sbjct: 145 HSGPGILSLCLSENDDEDNIKLNPEYRNVEFLITTGPGPCPQLDYKNIVFGVVLEGLDVV 204

Query: 754 TTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGELKVAK 921
           T+IA+IPTYKPSDRIRQFNDLAEF GDERAQ+AR IWN+PLKTVYISDCGELKVAK
Sbjct: 205 TSIASIPTYKPSDRIRQFNDLAEFLGDERAQNARTIWNKPLKTVYISDCGELKVAK 260


>ref|XP_003535048.1| PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Glycine max]
          Length = 287

 Score =  360 bits (924), Expect = 3e-97
 Identities = 179/244 (73%), Positives = 203/244 (83%), Gaps = 2/244 (0%)
 Frame = +1

Query: 196 TPTRQPDV-TITDRVYIDLSICPNYFRPDRTLGDDEYTACEETEPLGRVVIGLYGKQVPL 372
           TP   P   T+TDRV++D S+CPN F PDR   D     C +T  LGRVV+GLYG  VPL
Sbjct: 39  TPISTPTTPTVTDRVFMDFSLCPNNFLPDRA--DSLSPLCSDTTLLGRVVLGLYGNLVPL 96

Query: 373 TVSNFKQMCIG-TSTGSSYKGTLVHKIFPGEYFIAGKQGRRDKGEVKPPYDQLARNTETV 549
           TVSNFK MC+G  ST SSYK TLVHK+FPG+YF+AG+QGR DKGEV+PP+D L RNT+TV
Sbjct: 97  TVSNFKSMCLGLNSTSSSYKNTLVHKVFPGQYFLAGRQGRPDKGEVRPPHD-LPRNTDTV 155

Query: 550 ESRAFLLQHSRPGVVSLCLSENDDEDEIKLDPEYRNVEFLITTGPAPTPQLDGRNIVFGT 729
            ++AF L HSRPGVVSL LSENDD+DEIKLDP YRNVEFLITTGP P PQLD +NIVFGT
Sbjct: 156 AAKAFALTHSRPGVVSLSLSENDDDDEIKLDPGYRNVEFLITTGPGPCPQLDNKNIVFGT 215

Query: 730 VLEGLDVVTTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGEL 909
           VLEGLDV+T IA+IPTY PS+RIRQFNDLA+FFGDERAQ+ARNIWNRPLK+VYISDCGEL
Sbjct: 216 VLEGLDVITAIASIPTYLPSERIRQFNDLAQFFGDERAQNARNIWNRPLKSVYISDCGEL 275

Query: 910 KVAK 921
           KV K
Sbjct: 276 KVTK 279


>ref|XP_003546604.1| PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Glycine max]
          Length = 286

 Score =  356 bits (914), Expect = 5e-96
 Identities = 177/244 (72%), Positives = 203/244 (83%), Gaps = 3/244 (1%)
 Frame = +1

Query: 199 PTRQPDV-TITDRVYIDLSICPNYFRPDRTLGDDEYTACEETEPLGRVVIGLYGKQVPLT 375
           PT  P   T+TDRV++D S+CPN F PDR   D     C ++  LGRVV+GLYG  VPLT
Sbjct: 38  PTPIPTTPTVTDRVFMDFSLCPNNFLPDRA--DALSPLCSDSNLLGRVVLGLYGNLVPLT 95

Query: 376 VSNFKQMCIG--TSTGSSYKGTLVHKIFPGEYFIAGKQGRRDKGEVKPPYDQLARNTETV 549
           VSNFK MC+G   +T SSYK TLVHK+FPG+YF+AG+QGR DKGEV+PP+D L RNTETV
Sbjct: 96  VSNFKSMCLGGLNATSSSYKNTLVHKVFPGQYFLAGRQGRPDKGEVRPPHD-LPRNTETV 154

Query: 550 ESRAFLLQHSRPGVVSLCLSENDDEDEIKLDPEYRNVEFLITTGPAPTPQLDGRNIVFGT 729
           +++AF L HSRPGVVSL LSENDD+DEIKLDP YRNVEFLITTGP P PQLD +NIVFGT
Sbjct: 155 DAKAFALTHSRPGVVSLSLSENDDDDEIKLDPGYRNVEFLITTGPGPCPQLDNKNIVFGT 214

Query: 730 VLEGLDVVTTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGEL 909
           VLEGLDV+T IA+IPTY+PS+RIRQFNDLA FFGDERAQ+ARNIWNRPL +VYISDCGEL
Sbjct: 215 VLEGLDVITAIASIPTYQPSERIRQFNDLARFFGDERAQNARNIWNRPLTSVYISDCGEL 274

Query: 910 KVAK 921
           KV K
Sbjct: 275 KVTK 278


>ref|XP_002267887.1| PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Vitis
           vinifera]
          Length = 295

 Score =  356 bits (914), Expect = 5e-96
 Identities = 178/241 (73%), Positives = 202/241 (83%)
 Frame = +1

Query: 199 PTRQPDVTITDRVYIDLSICPNYFRPDRTLGDDEYTACEETEPLGRVVIGLYGKQVPLTV 378
           P   PD T+TDRVY+D SICP  FRP+    DD    C ++ PLGR+VIGLYG  VPLTV
Sbjct: 56  PPPPPDTTVTDRVYMDFSICPTSFRPE---ADD----CRDSLPLGRLVIGLYGHLVPLTV 108

Query: 379 SNFKQMCIGTSTGSSYKGTLVHKIFPGEYFIAGKQGRRDKGEVKPPYDQLARNTETVESR 558
           SNFK MC G+S GSSYK TLV KIFPG++F+AG+QGRRDKGEV+PP D LARNTETV+SR
Sbjct: 109 SNFKAMCTGSS-GSSYKNTLVQKIFPGQFFVAGRQGRRDKGEVRPPLD-LARNTETVDSR 166

Query: 559 AFLLQHSRPGVVSLCLSENDDEDEIKLDPEYRNVEFLITTGPAPTPQLDGRNIVFGTVLE 738
           AF L+HS+ GVVSLCLSENDD+DEIKL+P+YRNVEFLITTGP P PQLD RNIVFG+VLE
Sbjct: 167 AFALRHSKAGVVSLCLSENDDDDEIKLNPDYRNVEFLITTGPGPCPQLDNRNIVFGSVLE 226

Query: 739 GLDVVTTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGELKVA 918
           GLDVVT IA+IPTYKP++RIRQ NDLAEF GD+RA  AR  WN+PLKTVYISDCGELKV 
Sbjct: 227 GLDVVTAIASIPTYKPAERIRQLNDLAEFLGDDRAPIARATWNKPLKTVYISDCGELKVT 286

Query: 919 K 921
           K
Sbjct: 287 K 287


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