BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013502
         (1510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   141   4e-31
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...   134   8e-29
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-26
ref|XP_002889207.1| F-box family protein [Arabidopsis lyrata sub...   113   2e-22
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...   112   3e-22

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  141 bits (356), Expect = 4e-31
 Identities = 130/423 (30%), Positives = 199/423 (47%), Gaps = 24/423 (5%)
 Frame = -1

Query: 1477 AEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXVPKLDFSSRGYSSESAR-- 1304
            + D IS LPD LL +ILSFLPTK  V               VP LDF    + + S    
Sbjct: 8    SRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVE 67

Query: 1303 ------KFMNSIDRVLLSHNLSIIKKFSLSCSNCDNSRINAWLSAILKHKVQELNLSLCV 1142
                   F N +D VL    +S IKKF L   + +   + +W+   L+ +VQEL+L L +
Sbjct: 68   LEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQELDLHLLI 127

Query: 1141 YKKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFFDE-CLTDSF 965
              +  + LP   F C +L V+ LS    +  P+ +  P LK L L+ V++ D+  +    
Sbjct: 128  DWR--VELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLL 185

Query: 964  SSFPVLEELXXXXXXXXXXXXXXXXXNPALKCL-VLEMTDS----YDGGTIDF-FMMNAP 803
            S  PVLEEL                  P+LK L +   TD     Y+    D+  +++AP
Sbjct: 186  SGCPVLEELVIEREERDNQWVVNVSN-PSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAP 244

Query: 802  SLVSLSWVSDYLPIECSLSSMPSLVSAKVIFQKFRPERPKEEMALVSS------KLLEGL 641
            +L  LS ++DYL  +  +  +PSLV A +  ++   E  +       S      +LL  +
Sbjct: 245  NLEYLS-ITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRI 303

Query: 640  SHVKTLNISGQILSCAKDYLND--LPIFENLLWLEVHKDFHHFSTKSLLHLPRIAPYLET 467
            S+VK L+++G  L      + D  LP F N+  LE       F+   L +    +P LE 
Sbjct: 304  SNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEF-LFIGGFNWDFLPNFLHSSPNLEA 362

Query: 466  LVFKGERPYPEDGEGWILET-VPQCSLLHLKKVDYWEFEGHCVEFDVIKYLLENASVLEE 290
            LV +         EGW++   VP C +LHLK+++     G   E + ++YLL+NA VL++
Sbjct: 363  LVIETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQ 422

Query: 289  MVL 281
            M +
Sbjct: 423  MTI 425


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 467

 Score =  134 bits (336), Expect = 8e-29
 Identities = 130/427 (30%), Positives = 199/427 (46%), Gaps = 19/427 (4%)
 Frame = -1

Query: 1501 LKRDNMSVAEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXVPKLDF--SSR 1328
            L+R +M   +D IS LP+ +L+YILS L T++ V               +P  DF  SS 
Sbjct: 13   LQRYHMVDMKDMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDSSP 72

Query: 1327 GYSSESARKFMNSIDRVLLSHNLSIIKKF--SLSCSNCDNSRINAWLSAILKHKVQELNL 1154
              +S+S    ++ +D++L  H  + IKK    L  +  D  ++++ LS+ L H V +L L
Sbjct: 73   KRNSKSPDCLVDLVDQLL--HKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDVHDLTL 130

Query: 1153 SLCVYKKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFFDECLT 974
            +L   +    VLP +  +  SLT L +    +   P  I FP LKIL    V F +E   
Sbjct: 131  NL-ESENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSA 189

Query: 973  DS-FSSFPVLEELXXXXXXXXXXXXXXXXXNPALKCLVLEMTDSYDGGTIDFFMMNAPSL 797
               FS  PVL++L                  P LK L +    S        F ++A +L
Sbjct: 190  QRLFSGCPVLQDLSFEKCYWVNINISVAI--PTLKKLDIFFRSSSLDRNSCMFKIDAVNL 247

Query: 796  VSLSWVSDYLPIECSLSSMPSLVSAKVIFQKFRPERPKEEMALVSSKLLEGLSHVKTLNI 617
            +SLS+ S+   I C L +  S+V A +    F  +  +  +A+ + +L   L  V++L +
Sbjct: 248  LSLSYKSNPT-INCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRL 306

Query: 616  SGQILSC---AKDYLNDLPIFENLLWLEVHKDFHHFSTKSLLHLPRIAPYLETLV----- 461
            S Q + C   AK  L+ LP F+NL  LEVH  F   S + L  + R +P LE L      
Sbjct: 307  SDQTIQCLNYAKSALHLLPSFKNLTRLEVH--FDDPSCEVLADILRKSPKLEFLHIYGVH 364

Query: 460  ------FKGERPYPEDGEGWILETVPQCSLLHLKKVDYWEFEGHCVEFDVIKYLLENASV 299
                  F        D E W  +++P C    LK  D  +F G   E  ++K+LLEN ++
Sbjct: 365  LVSCSRFSSGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTL 424

Query: 298  LEEMVLH 278
            L EM ++
Sbjct: 425  LREMNIY 431


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  125 bits (313), Expect = 4e-26
 Identities = 121/412 (29%), Positives = 175/412 (42%), Gaps = 3/412 (0%)
 Frame = -1

Query: 1498 KRDNMSVAEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXVPKLDFSSRGYS 1319
            K+D        I+ LPD LL +ILSFL TK  V               +  L+F  + Y 
Sbjct: 29   KQDMDDSGGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFH-QCYF 87

Query: 1318 SESARKFMNSIDRVLLSHNLSIIKKFSLSCSNCDNSRINAWLSAILKHKVQELNLSLCVY 1139
                + FMNS++RVLL  + S I+KF+LSC   D +R   W+SA +   V+EL ++    
Sbjct: 88   KAKRKIFMNSVERVLLLRDSSNIEKFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYEG 147

Query: 1138 -KKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFFDECLTDSFS 962
             + ES V P+ LF+CA+LT L ++S G+++  S IS P LKIL L+ V F DE  T    
Sbjct: 148  GESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQIL 207

Query: 961  SFPVLEELXXXXXXXXXXXXXXXXXNPALKCL-VLEM-TDSYDGGTIDFFMMNAPSLVSL 788
            +   LE+L                  P L+ L + EM  +   G      M+   +L   
Sbjct: 208  NLRTLEKL-KISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALTFF 266

Query: 787  SWVSDYLPIECSLSSMPSLVSAKVIFQKFRPERPKEEMALVSSKLLEGLSHVKTLNISGQ 608
            S+   +    C   S  SLV A   F  +       E+A  + K + GLS VK L ++  
Sbjct: 267  SFSGGFWDDYCLFKS-SSLVEA--YFHVYGCYERSREIAHRAYKHIVGLSTVKHLTLTPD 323

Query: 607  ILSCAKDYLNDLPIFENLLWLEVHKDFHHFSTKSLLHLPRIAPYLETLVFKGERPYPEDG 428
            +L                                             +    E P     
Sbjct: 324  VLK--------------------------------------------IELSEELPTNCAK 339

Query: 427  EGWILETVPQCSLLHLKKVDYWEFEGHCVEFDVIKYLLENASVLEEMVLHTS 272
            + WILE VP C    LK ++  +F G   E D +  LL+NA  L++MV+  S
Sbjct: 340  DDWILEPVPPCFQSCLKCIEIRDFGGLIDELDAVALLLKNAIALDDMVITCS 391


>ref|XP_002889207.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297335048|gb|EFH65466.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  113 bits (282), Expect = 2e-22
 Identities = 117/420 (27%), Positives = 194/420 (46%), Gaps = 14/420 (3%)
 Frame = -1

Query: 1498 KRDNMSVAEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXVPKLDFSSRGYS 1319
            KR+  S  EDR+S LP++LL  I+  +PTK VV               VP L+     + 
Sbjct: 8    KRERRS-DEDRLSNLPESLLCQIMLNIPTKDVVKSCVLSRRWRNLWRYVPGLNVEYSEFL 66

Query: 1318 SESARKFMNSIDRVLLSHNLSIIKKFSLSCSNCDN-----SRINAWLSAILKHKVQELNL 1154
              +A  F++ +DR L     S  ++F L   +CD      S +  W++ ++  K++ L++
Sbjct: 67   DYNA--FVSFVDRFLGVERESCFERFRLR-YDCDEEERTISIVKRWINIVVNQKLKVLDV 123

Query: 1153 SLCVYKKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFFDECLT 974
                +  E + +P ++++C SL  + L +V I+  P FIS P +K ++L  V+F +  + 
Sbjct: 124  LDYTWGNEEVQIPPSVYTCESLVSMKLCNV-ILPNPQFISLPLVKAIELDIVKFANALVL 182

Query: 973  DS-FSSFPVLEELXXXXXXXXXXXXXXXXXNPALKCL-VLEMTDSYDGGTIDFFMMNAPS 800
            +   SS   LE L                    L+   +   +D +DG  +    ++AP 
Sbjct: 183  EKLISSCSALESLIISRSSVDDIDVLRVRSRSLLRFKHIGNCSDGWDGCEV---AIDAPK 239

Query: 799  LVSLSWVSDYLPIECSLSSMPSLVSA--KVIFQKFR----PERPKEEMALVSSKLLEGLS 638
            L  L+ +SD+   +  + +  SLV A   +IF          RPK +M       L  +S
Sbjct: 240  LEYLN-ISDHSTAKFRIKNSGSLVEANINIIFNMEELPDPNNRPKRKMI---RDFLAEIS 295

Query: 637  HVKTLNISGQILSCAKDYLNDLPIFENLLWLEVHKDFHHFSTKSLLHLPRIAPYLETLVF 458
             VKTL IS   L    D   +LP+F NL    +H DF   S K L    +  P L++LV 
Sbjct: 296  TVKTLFISSHTLEVIFDSSCELPVFHNL--SSLHIDFEDHSLKMLSTFLQSCPNLKSLVV 353

Query: 457  KGERPYPEDGEGWILETVPQCSLLHLKKVDYWE-FEGHCVEFDVIKYLLENASVLEEMVL 281
            + +    EDG G +  ++P C L  L+ V       G      ++ Y+LEN+ +L+++ L
Sbjct: 354  EFKDSSEEDGVGVL--SIPLCFLTTLEYVKIERPITGEARGMKLVSYILENSPILKKLTL 411


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
            F-box family-3 [Medicago truncatula]
          Length = 642

 Score =  112 bits (279), Expect = 3e-22
 Identities = 120/426 (28%), Positives = 191/426 (44%), Gaps = 16/426 (3%)
 Frame = -1

Query: 1501 LKRDNMSVAEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXVPKLDFSS-RG 1325
            ++R NM    D IS LP+ +L +ILS LPTK VV               +    F + R 
Sbjct: 172  IQRHNMDDMIDMISDLPEAVLLHILSLLPTKDVVRTSILAKKWKHLWTYLSAFHFETFRR 231

Query: 1324 YSSESARKFMNSIDRVL-----LSHNLSIIKKFSLSC--SNCDNSRINAWLSAILKHKVQ 1166
             +  S +   N  + +L     L H  + I++  +    S+ D  ++++ +S+   HK+Q
Sbjct: 232  LNESSLQNQKNKANCLLDLVGRLMHKSTRIERLGVQIFRSSIDTDKVSSIISSAANHKLQ 291

Query: 1165 ELNLSLCVYKKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFFD 986
             L+LSL   + ++ VLP +  +  SL  L L     +  PS I FP LK L + +V F +
Sbjct: 292  YLDLSLGD-RNDNFVLPHSFPAFESLNELRLGLQFTLHIPSGICFPILKTLVVTNVTFAN 350

Query: 985  ECLTDS-FSSFPVLEELXXXXXXXXXXXXXXXXXNPALKCLVLEMTDSYDGGTIDFFMMN 809
            E      FS  PVL+EL                 +   K  +  +    D   I    ++
Sbjct: 351  ENSAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYDHIMKLKID 410

Query: 808  APSLVSLSWVSDYLPIECSLSSMPSLVSAKVIFQKFRPERPKEEMALVSSKLLEGLSHVK 629
            A +L+SL  + + + IE    ++ SLV A  IF  +     +   A  S +LL+GL  VK
Sbjct: 411  AVNLLSLYCICNPI-IEVIPVNLTSLVDA-FIFLGYVYPHDEPYAAQCSIELLKGLGSVK 468

Query: 628  TLNISGQILSCAKDYLNDL-------PIFENLLWLEVHKDFHHFSTKSLLHLPRIAPYLE 470
            +L ++  IL      L++L       P F NL  L V       +   ++ + R  P LE
Sbjct: 469  SLKLNDIILMSFYHTLDNLHLHLLPLPTFYNLTHLYVCSVSPGNACALVMDILRKTPKLE 528

Query: 469  TLVFKGERPYPEDGEGWILETVPQCSLLHLKKVDYWEFEGHCVEFDVIKYLLENASVLEE 290
             L   G      D +  IL ++P C    LK++ +  F G+  E   + ++LENA  LEE
Sbjct: 529  DLTIPGVVLNYLDSDDLILNSLPCCFKSSLKRLCFLNFHGNVHEIKFVTFILENAPYLEE 588

Query: 289  MVLHTS 272
            + +H S
Sbjct: 589  IKIHCS 594