BLASTX nr result

ID: Coptis24_contig00013501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013501
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256...   313   9e-83
emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]   310   8e-82
ref|XP_002312220.1| predicted protein [Populus trichocarpa] gi|1...   300   6e-79
ref|XP_002303720.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78
ref|XP_004173920.1| PREDICTED: uncharacterized protein LOC101226...   296   7e-78

>ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256507 [Vitis vinifera]
            gi|297738175|emb|CBI27376.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  313 bits (801), Expect = 9e-83
 Identities = 149/200 (74%), Positives = 173/200 (86%)
 Frame = -2

Query: 1428 QEKRCSFITVNSDPLYVAYHDEEWGVPVHDDKLLFELIVLSGAQVGTDWTSILKKRQEXX 1249
            +EKRCSFIT NSDP YV YHDEEWGVPVHDDK LFEL+V++GAQVG+DWT++LKKRQE  
Sbjct: 199  EEKRCSFITPNSDPSYVEYHDEEWGVPVHDDKRLFELLVMTGAQVGSDWTTVLKKRQEYR 258

Query: 1248 XXXXXXXXDVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFMSFGKYLWGF 1069
                    ++V  F+EK+ITSIS  YGIDL++VRGVVDNS RI+EI+REF SF KY+WGF
Sbjct: 259  DALSGYDAEIVGKFSEKKITSISAYYGIDLSQVRGVVDNSNRILEIKREFGSFHKYIWGF 318

Query: 1068 FNNKPIITKYKSCHKIPVKTSKSETISKDMVRRGFRQVGPTVMHSFMQAAGLTNDHLISC 889
             N+KPI T+YKSCHKIPVKTSKSE+ISKDMVRRGFR VGPTV++SFMQAAGLTNDHLISC
Sbjct: 319  VNHKPITTQYKSCHKIPVKTSKSESISKDMVRRGFRLVGPTVIYSFMQAAGLTNDHLISC 378

Query: 888  PRHLECITLASHRPTVALAL 829
            PRHL+CI L+SH+P VA AL
Sbjct: 379  PRHLQCIALSSHQPAVAPAL 398


>emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]
          Length = 398

 Score =  310 bits (793), Expect = 8e-82
 Identities = 148/200 (74%), Positives = 172/200 (86%)
 Frame = -2

Query: 1428 QEKRCSFITVNSDPLYVAYHDEEWGVPVHDDKLLFELIVLSGAQVGTDWTSILKKRQEXX 1249
            +EKRCSFIT NSDP YV YHDEEWGVPVHDDK LFEL+V++GAQVG+DWT++LKKRQE  
Sbjct: 199  EEKRCSFITPNSDPSYVEYHDEEWGVPVHDDKRLFELLVMTGAQVGSDWTTVLKKRQEYR 258

Query: 1248 XXXXXXXXDVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFMSFGKYLWGF 1069
                    ++V  F+EK+ITSIS  YGIDL++VRGVVDNS RI+EI+REF SF KY+WGF
Sbjct: 259  DAFSGYDAEIVGKFSEKKITSISAYYGIDLSQVRGVVDNSNRILEIKREFGSFHKYIWGF 318

Query: 1068 FNNKPIITKYKSCHKIPVKTSKSETISKDMVRRGFRQVGPTVMHSFMQAAGLTNDHLISC 889
             N+KPI T+ KSCHKIPVKTSKSE+ISKDMVRRGFR VGPTV++SFMQAAGLTNDHLISC
Sbjct: 319  VNHKPITTQXKSCHKIPVKTSKSESISKDMVRRGFRLVGPTVIYSFMQAAGLTNDHLISC 378

Query: 888  PRHLECITLASHRPTVALAL 829
            PRHL+CI L+SH+P VA AL
Sbjct: 379  PRHLQCIALSSHQPAVAPAL 398


>ref|XP_002312220.1| predicted protein [Populus trichocarpa] gi|118486806|gb|ABK95238.1|
            unknown [Populus trichocarpa] gi|222852040|gb|EEE89587.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  300 bits (768), Expect = 6e-79
 Identities = 148/209 (70%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
 Frame = -2

Query: 1455 SSISTTPHSQEKRCSFITVNSDPLYVAYHDEEWGVPVHDDKLLFELIVLSGAQVGTDWTS 1276
            S  + T   +EKRCSFIT NSDP+YVAYHDEEWGVPVHDDK+LFEL+VLSGAQVG+DWTS
Sbjct: 194  SMATKTDQEEEKRCSFITANSDPIYVAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTS 253

Query: 1275 ILKKRQEXXXXXXXXXXDVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFM 1096
            ILKKRQ+          ++VAN +EKQI SIS  YGID++RVRGVVDNS RI+EI++EF 
Sbjct: 254  ILKKRQDFRDAFSGFDAEIVANISEKQIMSISAEYGIDMSRVRGVVDNSNRILEIKKEFG 313

Query: 1095 SFGKYLWGFFNNKPIITKYKSCHKIPVKTSKSETISKDMVRRGFRQVGPTVMHSFMQAAG 916
            SF +Y+W F NNKPI T YK  HKIPVKTSKSETISKDMVRRGFR VGPT++HSFMQAAG
Sbjct: 314  SFDRYIWTFVNNKPISTSYKFGHKIPVKTSKSETISKDMVRRGFRFVGPTMVHSFMQAAG 373

Query: 915  LTNDHLISCPRHLEC-ITLASHRPTVALA 832
            LTNDHLI+C RHL C +  A+ RPT A A
Sbjct: 374  LTNDHLITCHRHLPCTLMAAARRPTEAQA 402


>ref|XP_002303720.1| predicted protein [Populus trichocarpa] gi|222841152|gb|EEE78699.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  298 bits (763), Expect = 2e-78
 Identities = 143/208 (68%), Positives = 173/208 (83%), Gaps = 1/208 (0%)
 Frame = -2

Query: 1458 SSSISTTPHSQEKRCSFITVNSDPLYVAYHDEEWGVPVHDDKLLFELIVLSGAQVGTDWT 1279
            +S  ++T   +EKRCSFIT NSDP+YVAYHDEEWGVPVHDDKLLFEL+ L+GAQVG++WT
Sbjct: 136  NSPATSTITREEKRCSFITPNSDPVYVAYHDEEWGVPVHDDKLLFELLALTGAQVGSEWT 195

Query: 1278 SILKKRQEXXXXXXXXXXDVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREF 1099
            S+LKKR+           ++VA F EK+I SIS  YG+D+++VRGVVDNS RI+E++REF
Sbjct: 196  SVLKKREAFREAFSGFDAEIVAKFTEKKIASISAEYGLDISQVRGVVDNSNRILEVKREF 255

Query: 1098 MSFGKYLWGFFNNKPIITKYKSCHKIPVKTSKSETISKDMVRRGFRQVGPTVMHSFMQAA 919
             SF +YLWG+ N+KPI T+YKSC KIPVKTSKSETISKDMV+RGFR VGPTV+HSFMQA 
Sbjct: 256  GSFDEYLWGYVNHKPISTQYKSCQKIPVKTSKSETISKDMVKRGFRFVGPTVIHSFMQAG 315

Query: 918  GLTNDHLISCPRHLECITLASHRP-TVA 838
            GL+NDHLI+CPRHL+CI LAS  P TVA
Sbjct: 316  GLSNDHLITCPRHLQCIALASQLPRTVA 343


>ref|XP_004173920.1| PREDICTED: uncharacterized protein LOC101226717 [Cucumis sativus]
          Length = 397

 Score =  296 bits (759), Expect = 7e-78
 Identities = 142/200 (71%), Positives = 167/200 (83%)
 Frame = -2

Query: 1437 PHSQEKRCSFITVNSDPLYVAYHDEEWGVPVHDDKLLFELIVLSGAQVGTDWTSILKKRQ 1258
            P  +++RCSFIT NSDP+YVAYHDEEWGVPVHDDK+LFEL+VLS AQVG+DWTSILKKRQ
Sbjct: 180  PAVEDRRCSFITPNSDPIYVAYHDEEWGVPVHDDKMLFELLVLSVAQVGSDWTSILKKRQ 239

Query: 1257 EXXXXXXXXXXDVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFMSFGKYL 1078
            +          ++VANF++KQ+ SIST YGID+NRVRGVVDN+ RI++I++EF SF KY+
Sbjct: 240  DFRNAFSSFDSEIVANFSDKQMVSISTEYGIDINRVRGVVDNAIRILQIKKEFGSFDKYI 299

Query: 1077 WGFFNNKPIITKYKSCHKIPVKTSKSETISKDMVRRGFRQVGPTVMHSFMQAAGLTNDHL 898
            WGF NNKP   +YKS HKIPVKTSKSETISKDMVRRGFR VGPTV+HSFMQAAGLTNDHL
Sbjct: 300  WGFVNNKPFSPQYKSGHKIPVKTSKSETISKDMVRRGFRSVGPTVVHSFMQAAGLTNDHL 359

Query: 897  ISCPRHLECITLASHRPTVA 838
             +C RHL C  +A+ R T A
Sbjct: 360  TTCHRHLHCTLIAAGRRTPA 379


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