BLASTX nr result

ID: Coptis24_contig00013490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013490
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]   129   3e-28
emb|CBI32833.3| unnamed protein product [Vitis vinifera]              127   2e-27
dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]    125   5e-27
dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Grou...   125   8e-27
ref|NP_001058743.2| Os07g0112400 [Oryza sativa Japonica Group] g...   125   8e-27

>emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
          Length = 208

 Score =  129 bits (325), Expect = 3e-28
 Identities = 78/177 (44%), Positives = 107/177 (60%), Gaps = 10/177 (5%)
 Frame = -3

Query: 620 VVRQWISRIRNMNRYKTDKSIVVGLGVQWRPPSS---NKVATLQLCVGSRCLIFQICRSN 450
           +V  WI  I +++R++  K ++VGL ++WRP ++   N VA LQLCVG RCLIFQ+  + 
Sbjct: 34  MVDSWIGDIEHIHRHRLHK-LIVGLDIEWRPNNARYTNPVAILQLCVGRRCLIFQLLYAP 92

Query: 449 SIPWSLREFLSNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGAS 291
            IP SL +FL +   TFVGV    D+  L  D+ LRV NV++L  LA         R A 
Sbjct: 93  EIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAG 152

Query: 290 MEYLASSVLGFDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQAWKY 120
           ++ LA  VLG + V K + V RS W    L+  QV YACVDA+VSF++G+ L A  Y
Sbjct: 153 IKRLAREVLGRE-VEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGRSLNASAY 208


>emb|CBI32833.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  127 bits (319), Expect = 2e-27
 Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 10/174 (5%)
 Frame = -3

Query: 620 VVRQWISRIRNMNRYKTDKSIVVGLGVQWRPPSS---NKVATLQLCVGSRCLIFQICRSN 450
           +V  WI  I +++R++  K ++VGL ++WRP ++   N VA LQLCVG RCLIFQ+  + 
Sbjct: 34  MVDSWIGDIEHIHRHRLHK-LIVGLDIEWRPNNARYTNPVAILQLCVGRRCLIFQLLYAP 92

Query: 449 SIPWSLREFLSNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGAS 291
            IP SL +FL +   TFVGV    D+  L  D+ LRV NV++L  LA         R A 
Sbjct: 93  EIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAG 152

Query: 290 MEYLASSVLGFDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQA 129
           ++ LA  VLG + V K + V RS W    L+  QV YACVDA+VSF++G+ L A
Sbjct: 153 IKRLAREVLGRE-VEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGRCLNA 205


>dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 212

 Score =  125 bits (315), Expect = 5e-27
 Identities = 74/176 (42%), Positives = 107/176 (60%), Gaps = 10/176 (5%)
 Frame = -3

Query: 617 VRQWISRIRNMNRYKTDKSIVVGLGVQWRPP---SSNKVATLQLCVGSRCLIFQICRSNS 447
           V+ W+ +IR + R+   K ++VGL V+WRP    + N VA LQLCVG RCLIFQ+  ++ 
Sbjct: 28  VKAWLRQIRYVYRWVYHK-LIVGLDVEWRPSFGRAQNPVALLQLCVGRRCLIFQLLHADF 86

Query: 446 IPWSLREFLSNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASM 288
           IP +LR FL++    FVGV   ND D L  D+ L V NV++L  LA +       R A +
Sbjct: 87  IPLALRRFLADPDFRFVGVGVQNDVDRLNDDHGLEVANVVDLRSLAADEMRRPWLRQAGL 146

Query: 287 EYLASSVLGFDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQAWKY 120
           + +A  V+G + + K   V    W    L+QEQ++YAC+DA+VSF++G+KL    Y
Sbjct: 147 KDVAGVVMGAN-LHKPRRVTMGPWDACRLSQEQIQYACIDAFVSFEVGRKLLTGDY 201


>dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|24414042|dbj|BAC22291.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 752

 Score =  125 bits (313), Expect = 8e-27
 Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 10/172 (5%)
 Frame = -3

Query: 629  RAKVVRQWI--SRIRNMNRYKTDKSIVVGLGVQWRPPS-------SNKVATLQLCVGSRC 477
            R  V R+W+  +R R+  R ++   + V +GVQW PPS         +  TLQLCVGSRC
Sbjct: 565  RPAVARRWVFSTRWRHGRRLRSGAGLTVAMGVQWTPPSRALAGGAEPRPGTLQLCVGSRC 624

Query: 476  LIFQICRSNSIPWSLREFLSNG-VATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGNR 300
            L+FQ+ + N+ P +LR FL++G VA FVG    +D   L   + L V    EL  + G  
Sbjct: 625  LVFQVAQGNAFPAALRRFLADGGVAAFVGYGIRSDCRKLAAHHGLHVACTRELRAVTGMG 684

Query: 299  GASMEYLASSVLGFDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIG 144
             +SM  +A  +LG  G+ K   VGRS W   +L+++QV+YACVDA++S ++G
Sbjct: 685  SSSMARMAEELLGLAGIKKPAAVGRSRWDAPKLSKKQVKYACVDAFLSHRLG 736



 Score =  117 bits (293), Expect = 2e-24
 Identities = 70/169 (41%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
 Frame = -3

Query: 614 RQWISRIRNMN-RYKTDKSIVVGLGVQWRP--------PSSNKVATLQLCVGSRCLIFQI 462
           R+W+   R ++ R      ++VGLGVQW P              ATLQLCVG RCL+F +
Sbjct: 43  RRWVHTTRWLHHRLLRSGRLLVGLGVQWTPLRRPLHRGSPPPPPATLQLCVGHRCLVFHL 102

Query: 461 CRSNSIPWSLREFLSNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGNRGASMEY 282
             +++IP +LR FL++   TFVG    ND  ML   Y L V +  EL  +A    ASME 
Sbjct: 103 AHADAIPAALRRFLADPRITFVGSGASNDRRMLSAYYDLHVASARELRAVAAMGNASMEA 162

Query: 281 LASSVLGFDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKL 135
           +A   LG+ G+ K   V  S W    L+ EQVEYACVDAY++F++   L
Sbjct: 163 MADRFLGYPGIAKPTNVSMSAWHAPYLSIEQVEYACVDAYLAFRLAVHL 211


>ref|NP_001058743.2| Os07g0112400 [Oryza sativa Japonica Group]
            gi|255677453|dbj|BAF20657.2| Os07g0112400 [Oryza sativa
            Japonica Group]
          Length = 768

 Score =  125 bits (313), Expect = 8e-27
 Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 10/172 (5%)
 Frame = -3

Query: 629  RAKVVRQWI--SRIRNMNRYKTDKSIVVGLGVQWRPPS-------SNKVATLQLCVGSRC 477
            R  V R+W+  +R R+  R ++   + V +GVQW PPS         +  TLQLCVGSRC
Sbjct: 581  RPAVARRWVFSTRWRHGRRLRSGAGLTVAMGVQWTPPSRALAGGAEPRPGTLQLCVGSRC 640

Query: 476  LIFQICRSNSIPWSLREFLSNG-VATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGNR 300
            L+FQ+ + N+ P +LR FL++G VA FVG    +D   L   + L V    EL  + G  
Sbjct: 641  LVFQVAQGNAFPAALRRFLADGGVAAFVGYGIRSDCRKLAAHHGLHVACTRELRAVTGMG 700

Query: 299  GASMEYLASSVLGFDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIG 144
             +SM  +A  +LG  G+ K   VGRS W   +L+++QV+YACVDA++S ++G
Sbjct: 701  SSSMARMAEELLGLAGIKKPAAVGRSRWDAPKLSKKQVKYACVDAFLSHRLG 752



 Score =  117 bits (293), Expect = 2e-24
 Identities = 70/169 (41%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
 Frame = -3

Query: 614 RQWISRIRNMN-RYKTDKSIVVGLGVQWRP--------PSSNKVATLQLCVGSRCLIFQI 462
           R+W+   R ++ R      ++VGLGVQW P              ATLQLCVG RCL+F +
Sbjct: 43  RRWVHTTRWLHHRLLRSGRLLVGLGVQWTPLRRPLHRGSPPPPPATLQLCVGHRCLVFHL 102

Query: 461 CRSNSIPWSLREFLSNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGNRGASMEY 282
             +++IP +LR FL++   TFVG    ND  ML   Y L V +  EL  +A    ASME 
Sbjct: 103 AHADAIPAALRRFLADPRITFVGSGASNDRRMLSAYYDLHVASARELRAVAAMGNASMEA 162

Query: 281 LASSVLGFDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKL 135
           +A   LG+ G+ K   V  S W    L+ EQVEYACVDAY++F++   L
Sbjct: 163 MADRFLGYPGIAKPTNVSMSAWHAPYLSIEQVEYACVDAYLAFRLAVHL 211


Top