BLASTX nr result
ID: Coptis24_contig00013487
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013487 (213 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11 emb|CBI21840.3| unnamed protein product [Vitis vinifera] 69 4e-10 ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi... 69 4e-10 emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera] 69 4e-10 gb|AFK47046.1| unknown [Lotus japonicus] 65 6e-09 >ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Vitis vinifera] Length = 494 Score = 73.6 bits (179), Expect = 2e-11 Identities = 32/69 (46%), Positives = 48/69 (69%) Frame = +2 Query: 5 AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184 AYC+ GL EKAE L+NK + KG PL TW YLA GY+ ++ PKA++A++ A++ P Sbjct: 369 AYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVEALKKAVVVCPPN 428 Query: 185 WMLNRDTLS 211 W +++TL+ Sbjct: 429 WKPSKNTLA 437 >emb|CBI21840.3| unnamed protein product [Vitis vinifera] Length = 446 Score = 68.9 bits (167), Expect = 4e-10 Identities = 32/69 (46%), Positives = 46/69 (66%) Frame = +2 Query: 5 AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184 AYCK GL+EKAE L+++ +E+G++P++ TW LA GY N+ KA+ ++ ALLA Sbjct: 302 AYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQG 361 Query: 185 WMLNRDTLS 211 W N TLS Sbjct: 362 WKPNPVTLS 370 >ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Vitis vinifera] Length = 499 Score = 68.9 bits (167), Expect = 4e-10 Identities = 32/69 (46%), Positives = 46/69 (66%) Frame = +2 Query: 5 AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184 AYCK GL+EKAE L+++ +E+G++P++ TW LA GY N+ KA+ ++ ALLA Sbjct: 355 AYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQG 414 Query: 185 WMLNRDTLS 211 W N TLS Sbjct: 415 WKPNPVTLS 423 >emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera] Length = 499 Score = 68.9 bits (167), Expect = 4e-10 Identities = 32/69 (46%), Positives = 46/69 (66%) Frame = +2 Query: 5 AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184 AYCK GL+EKAE L+++ +E+G++P++ TW LA GY N+ KA+ ++ ALLA Sbjct: 355 AYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQG 414 Query: 185 WMLNRDTLS 211 W N TLS Sbjct: 415 WKPNPVTLS 423 >gb|AFK47046.1| unknown [Lotus japonicus] Length = 496 Score = 65.1 bits (157), Expect = 6e-09 Identities = 30/68 (44%), Positives = 43/68 (63%) Frame = +2 Query: 5 AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184 AYCK GL++KAE + K ++ GKK S+W +A GY N+ KA++ M+ A+LA RP Sbjct: 354 AYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPG 413 Query: 185 WMLNRDTL 208 W + TL Sbjct: 414 WRPSPSTL 421