BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013487
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
emb|CBI21840.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]    69   4e-10
gb|AFK47046.1| unknown [Lotus japonicus]                               65   6e-09

>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = +2

Query: 5   AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184
           AYC+ GL EKAE L+NK + KG  PL  TW YLA GY+  ++ PKA++A++ A++   P 
Sbjct: 369 AYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVEALKKAVVVCPPN 428

Query: 185 WMLNRDTLS 211
           W  +++TL+
Sbjct: 429 WKPSKNTLA 437


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +2

Query: 5   AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184
           AYCK GL+EKAE L+++ +E+G++P++ TW  LA GY   N+  KA+  ++ ALLA    
Sbjct: 302 AYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQG 361

Query: 185 WMLNRDTLS 211
           W  N  TLS
Sbjct: 362 WKPNPVTLS 370


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +2

Query: 5   AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184
           AYCK GL+EKAE L+++ +E+G++P++ TW  LA GY   N+  KA+  ++ ALLA    
Sbjct: 355 AYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQG 414

Query: 185 WMLNRDTLS 211
           W  N  TLS
Sbjct: 415 WKPNPVTLS 423


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +2

Query: 5   AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184
           AYCK GL+EKAE L+++ +E+G++P++ TW  LA GY   N+  KA+  ++ ALLA    
Sbjct: 355 AYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQG 414

Query: 185 WMLNRDTLS 211
           W  N  TLS
Sbjct: 415 WKPNPVTLS 423


>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/68 (44%), Positives = 43/68 (63%)
 Frame = +2

Query: 5   AYCKNGLVEKAEMLLNKTVEKGKKPLSSTWGYLATGYVAANEFPKALKAMESALLARRPK 184
           AYCK GL++KAE  + K ++ GKK   S+W  +A GY   N+  KA++ M+ A+LA RP 
Sbjct: 354 AYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPG 413

Query: 185 WMLNRDTL 208
           W  +  TL
Sbjct: 414 WRPSPSTL 421