BLASTX nr result

ID: Coptis24_contig00013485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013485
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263023.2| PREDICTED: uncharacterized protein LOC100243...   407   e-111
ref|XP_003634913.1| PREDICTED: uncharacterized protein LOC100243...   387   e-105
ref|XP_002527685.1| conserved hypothetical protein [Ricinus comm...   357   5e-96
ref|XP_002329748.1| predicted protein [Populus trichocarpa] gi|2...   354   2e-95
gb|AAO22674.1| unknown protein [Arabidopsis thaliana]                 348   2e-93

>ref|XP_002263023.2| PREDICTED: uncharacterized protein LOC100243690 isoform 1 [Vitis
            vinifera] gi|296088813|emb|CBI38263.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  407 bits (1047), Expect = e-111
 Identities = 224/347 (64%), Positives = 263/347 (75%), Gaps = 2/347 (0%)
 Frame = -2

Query: 1204 HYYFTPSLP--TRLKYPLLNLPSFTLHKTRVGFAVSCSHSAVSTRGKASFDPDLRLVLEL 1031
            H  FT   P  T+  YP+    S +  K  +G   S SHS++S  G+ +FDP+LR VLEL
Sbjct: 7    HLSFTLLHPHSTKPNYPIFRSRSPST-KITLGLVFS-SHSSISRNGQGAFDPELRPVLEL 64

Query: 1030 ATDSELYELEHILFGPSYFSPLLKSVTSSKADVDYFTIGXXXXXXXXXXXXXESRFMYLA 851
            ATDSEL+ELE ILFGPSYFSPLLKS+ S +ADVDY  I              ESRF++LA
Sbjct: 65   ATDSELFELERILFGPSYFSPLLKSI-SRRADVDYAMIEEDLEEREDFISSLESRFLFLA 123

Query: 850  ADARSTLRGWRPSYREILLGVRKKLSVPCSSKLSTEDLEVEIFLHLIQEYSSGETGHASQ 671
            ADARSTLRGWRPSYR +LLGVRKKL+VPCSSKLSTEDLEVEIFLHL+Q+YSS E+G  S+
Sbjct: 124  ADARSTLRGWRPSYRNVLLGVRKKLNVPCSSKLSTEDLEVEIFLHLLQDYSSEESGALSK 183

Query: 670  SWENSMVSNSHHGLELGLNKRKVQAVAALNFGAAELKSTIMKAGSMFTLGKVYQLLARRL 491
            SWENS  S SH  LE GL++ KVQAVAAL  GA+EL+S I+K GSM TLGK+Y LLARRL
Sbjct: 184  SWENSKASTSHGNLEFGLSQWKVQAVAALGAGASELRSIILKGGSMLTLGKIYHLLARRL 243

Query: 490  SGKMLSEAANYQIKCEIIKEGGKLAALSLQPRTXXXXXXXXXXXXASRFLGLRTVMMLFG 311
            SGK+  EAANYQIK E+IK+GG+LAA++L+ R             ASR+LGLR+ + LFG
Sbjct: 244  SGKLFLEAANYQIKNEVIKKGGQLAAINLESRAALLAAKQGFAGAASRYLGLRSTIALFG 303

Query: 310  PMLWGTLLADVVIQMLGTDYARILRAIYAFAQIRITRTYKLASDKDQ 170
            P+LWGT LADVVIQMLGTDYARILRAIYAFAQIRITRTY+L SD D+
Sbjct: 304  PVLWGTFLADVVIQMLGTDYARILRAIYAFAQIRITRTYRLPSDGDR 350


>ref|XP_003634913.1| PREDICTED: uncharacterized protein LOC100243690 isoform 2 [Vitis
            vinifera]
          Length = 346

 Score =  387 bits (995), Expect = e-105
 Identities = 213/333 (63%), Positives = 251/333 (75%), Gaps = 2/333 (0%)
 Frame = -2

Query: 1204 HYYFTPSLP--TRLKYPLLNLPSFTLHKTRVGFAVSCSHSAVSTRGKASFDPDLRLVLEL 1031
            H  FT   P  T+  YP+    S +  K  +G   S SHS++S  G+ +FDP+LR VLEL
Sbjct: 7    HLSFTLLHPHSTKPNYPIFRSRSPST-KITLGLVFS-SHSSISRNGQGAFDPELRPVLEL 64

Query: 1030 ATDSELYELEHILFGPSYFSPLLKSVTSSKADVDYFTIGXXXXXXXXXXXXXESRFMYLA 851
            ATDSEL+ELE ILFGPSYFSPLLKS+ S +ADVDY  I              ESRF++LA
Sbjct: 65   ATDSELFELERILFGPSYFSPLLKSI-SRRADVDYAMIEEDLEEREDFISSLESRFLFLA 123

Query: 850  ADARSTLRGWRPSYREILLGVRKKLSVPCSSKLSTEDLEVEIFLHLIQEYSSGETGHASQ 671
            ADARSTLRGWRPSYR +LLGVRKKL+VPCSSKLSTEDLEVEIFLHL+Q+YSS E+G  S+
Sbjct: 124  ADARSTLRGWRPSYRNVLLGVRKKLNVPCSSKLSTEDLEVEIFLHLLQDYSSEESGALSK 183

Query: 670  SWENSMVSNSHHGLELGLNKRKVQAVAALNFGAAELKSTIMKAGSMFTLGKVYQLLARRL 491
            SWENS  S SH  LE GL++ KVQAVAAL  GA+EL+S I+K GSM TLGK+Y LLARRL
Sbjct: 184  SWENSKASTSHGNLEFGLSQWKVQAVAALGAGASELRSIILKGGSMLTLGKIYHLLARRL 243

Query: 490  SGKMLSEAANYQIKCEIIKEGGKLAALSLQPRTXXXXXXXXXXXXASRFLGLRTVMMLFG 311
            SGK+  EAANYQIK E+IK+GG+LAA++L+ R             ASR+LGLR+ + LFG
Sbjct: 244  SGKLFLEAANYQIKNEVIKKGGQLAAINLESRAALLAAKQGFAGAASRYLGLRSTIALFG 303

Query: 310  PMLWGTLLADVVIQMLGTDYARILRAIYAFAQI 212
            P+LWGT LADVVIQMLGTDYARILRAIYAFAQ+
Sbjct: 304  PVLWGTFLADVVIQMLGTDYARILRAIYAFAQV 336


>ref|XP_002527685.1| conserved hypothetical protein [Ricinus communis]
            gi|223532916|gb|EEF34684.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 372

 Score =  357 bits (915), Expect = 5e-96
 Identities = 188/308 (61%), Positives = 227/308 (73%)
 Frame = -2

Query: 1108 VSCSHSAVSTRGKASFDPDLRLVLELATDSELYELEHILFGPSYFSPLLKSVTSSKADVD 929
            + CSH+AVS     + D +LR VLELATDSELYELE ILFGPSYFSPLLKS+T +  DV+
Sbjct: 66   IRCSHAAVS----GTLDRELRSVLELATDSELYELERILFGPSYFSPLLKSITGNGVDVE 121

Query: 928  YFTIGXXXXXXXXXXXXXESRFMYLAADARSTLRGWRPSYREILLGVRKKLSVPCSSKLS 749
            Y T               ESRF+YLAADARSTLRGWRPSYR +LL VRKKL++PCS KL 
Sbjct: 122  YSTFEDDMAEREAFIAALESRFLYLAADARSTLRGWRPSYRNVLLAVRKKLNIPCSRKLP 181

Query: 748  TEDLEVEIFLHLIQEYSSGETGHASQSWENSMVSNSHHGLELGLNKRKVQAVAALNFGAA 569
            TEDLE EIFLHL+Q++ S E+G     WE S V +    LE+GL +   QA+AA+  G A
Sbjct: 182  TEDLEAEIFLHLLQDHPSEESGTVPGLWEFSEVPSDQGSLEIGLRQWNGQAIAAIKLGLA 241

Query: 568  ELKSTIMKAGSMFTLGKVYQLLARRLSGKMLSEAANYQIKCEIIKEGGKLAALSLQPRTX 389
            EL+S I+K G +FTL + YQLLAR+LSGK+  EAANYQIK E+IK+GG+LAA++L+ R  
Sbjct: 242  ELQSVILKGGGVFTLSRFYQLLARKLSGKVFLEAANYQIKKEVIKKGGQLAAINLESRAA 301

Query: 388  XXXXXXXXXXXASRFLGLRTVMMLFGPMLWGTLLADVVIQMLGTDYARILRAIYAFAQIR 209
                       ASR+LG R+++ L GPMLWGT LADVVIQMLGTDYARILRAIYAFA+IR
Sbjct: 302  LLAAKQGLAGAASRYLGFRSMLALLGPMLWGTFLADVVIQMLGTDYARILRAIYAFAKIR 361

Query: 208  ITRTYKLA 185
            ITRTY+L+
Sbjct: 362  ITRTYRLS 369


>ref|XP_002329748.1| predicted protein [Populus trichocarpa] gi|222870656|gb|EEF07787.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  354 bits (909), Expect = 2e-95
 Identities = 188/310 (60%), Positives = 232/310 (74%), Gaps = 1/310 (0%)
 Frame = -2

Query: 1099 SHSAVSTRGK-ASFDPDLRLVLELATDSELYELEHILFGPSYFSPLLKSVTSSKADVDYF 923
            SH++ S + +   FD DLR VLELATDSELYELE+ILFGPS+FSPLLKS+ S +A++DY 
Sbjct: 46   SHASFSPKSQDGPFDRDLRSVLELATDSELYELENILFGPSHFSPLLKSIASKRAEIDYA 105

Query: 922  TIGXXXXXXXXXXXXXESRFMYLAADARSTLRGWRPSYREILLGVRKKLSVPCSSKLSTE 743
             +              ESRF +LAADARSTLRGWRP+YR +LL VRKKLS+ CSSKLSTE
Sbjct: 106  MMDQDMEEREDMISCLESRFFFLAADARSTLRGWRPTYRNVLLTVRKKLSIGCSSKLSTE 165

Query: 742  DLEVEIFLHLIQEYSSGETGHASQSWENSMVSNSHHGLELGLNKRKVQAVAALNFGAAEL 563
            DLE EIFLHL++EY+S ++G     WE S  S+    L +GL++ KVQA+AA   GAA+L
Sbjct: 166  DLEAEIFLHLLEEYASEQSGTFPGLWELSKTSDDQGSLGIGLSQEKVQALAAQKLGAADL 225

Query: 562  KSTIMKAGSMFTLGKVYQLLARRLSGKMLSEAANYQIKCEIIKEGGKLAALSLQPRTXXX 383
            +S I+K G +FTL ++YQ LA++L+GK+  EAANYQIK EIIK+GG+LAA++L+ R    
Sbjct: 226  QSIILKGGGVFTLTRIYQWLAKKLTGKVFLEAANYQIKKEIIKKGGQLAAINLESRAALL 285

Query: 382  XXXXXXXXXASRFLGLRTVMMLFGPMLWGTLLADVVIQMLGTDYARILRAIYAFAQIRIT 203
                     ASR+LGLR++M L GPMLWGT LADVVIQMLGTDYARILRAIYAFAQIRIT
Sbjct: 286  VAKQGFVGAASRYLGLRSMMSLLGPMLWGTFLADVVIQMLGTDYARILRAIYAFAQIRIT 345

Query: 202  RTYKLASDKD 173
            RT +L  D D
Sbjct: 346  RTCRLPCDND 355


>gb|AAO22674.1| unknown protein [Arabidopsis thaliana]
          Length = 350

 Score =  348 bits (893), Expect = 2e-93
 Identities = 186/324 (57%), Positives = 235/324 (72%)
 Frame = -2

Query: 1159 LLNLPSFTLHKTRVGFAVSCSHSAVSTRGKASFDPDLRLVLELATDSELYELEHILFGPS 980
            +L +P     + ++GFA++ S +A  +  +A++DP+LRLV ELATDSELYELE ILFGPS
Sbjct: 26   ILKIPRTGWRRKQLGFALA-STAASESPSEATYDPELRLVFELATDSELYELEKILFGPS 84

Query: 979  YFSPLLKSVTSSKADVDYFTIGXXXXXXXXXXXXXESRFMYLAADARSTLRGWRPSYREI 800
            YFSPLLKS+ + K   D   IG             ESRF++LAADARSTLRGWRPSYR +
Sbjct: 85   YFSPLLKSIPN-KGGGDRLMIGQDIEVRDGFIEALESRFLFLAADARSTLRGWRPSYRNV 143

Query: 799  LLGVRKKLSVPCSSKLSTEDLEVEIFLHLIQEYSSGETGHASQSWENSMVSNSHHGLELG 620
            LL VR  L++PCSS+L TEDLE EIFL+L+  +SS  +G     WENS VS +   LELG
Sbjct: 144  LLAVRNNLNIPCSSQLPTEDLEAEIFLYLVDNFSSEASGVFPGMWENSEVSEAEGSLELG 203

Query: 619  LNKRKVQAVAALNFGAAELKSTIMKAGSMFTLGKVYQLLARRLSGKMLSEAANYQIKCEI 440
            L+K KV+ +AAL  GA E++S I+K G M T  KVYQLLA++LSGK+  EAANYQI+ E+
Sbjct: 204  LSKWKVELLAALQVGATEVQSMILKGGGMITFAKVYQLLAKKLSGKVFLEAANYQIRKEM 263

Query: 439  IKEGGKLAALSLQPRTXXXXXXXXXXXXASRFLGLRTVMMLFGPMLWGTLLADVVIQMLG 260
            +K+GG+ AA++L+ R             ASR++GL+T M L GPM+WGTLLAD+VIQML 
Sbjct: 264  LKKGGQFAAINLESRAALLAAKHGFAGAASRYIGLKTAMQLLGPMMWGTLLADLVIQMLE 323

Query: 259  TDYARILRAIYAFAQIRITRTYKL 188
            TDYARILRAIYAFAQIRITRTY+L
Sbjct: 324  TDYARILRAIYAFAQIRITRTYRL 347


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