BLASTX nr result

ID: Coptis24_contig00013476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013476
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321564.1| predicted protein [Populus trichocarpa] gi|2...   232   3e-59
ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis...   230   1e-58
emb|CBI15085.3| unnamed protein product [Vitis vinifera]              228   3e-58
ref|XP_002283633.1| PREDICTED: endonuclease III-like [Vitis vini...   228   3e-58
ref|XP_003608916.1| Ultraviolet N-glycosylase/AP lyase [Medicago...   219   2e-55

>ref|XP_002321564.1| predicted protein [Populus trichocarpa] gi|222868560|gb|EEF05691.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  232 bits (591), Expect = 3e-59
 Identities = 111/147 (75%), Positives = 131/147 (89%)
 Frame = +2

Query: 14  EDGEKESVLDGLVRTLLSQNTTEVNSKRAFDSLKAAFPTWEQVLAADPKCIENTIKCGGL 193
           E+ E+ES LDGLV+T+LSQNTTEVNS+RAF +LK+AFPTWE VLAA+ K IE+ I+CGGL
Sbjct: 105 EEEEEESALDGLVKTVLSQNTTEVNSQRAFLNLKSAFPTWENVLAAESKFIEDAIRCGGL 164

Query: 194 AVTKASCIKNLLATLLEKKGNLCLEYLRDLPVDQIKAELSGFKGIGPKTVACVLMFNLQR 373
           A TKA+CI+N+L++L+EKKG LCLEYLRDLPV +IKAELS FKGIGPKTVACVLMFNLQ+
Sbjct: 165 APTKAACIRNILSSLMEKKGRLCLEYLRDLPVAEIKAELSHFKGIGPKTVACVLMFNLQK 224

Query: 374 DDFPVDTHVFRITKAMGWIPDSADREK 454
           DDFPVDTHVF I KA+GW+P  ADR K
Sbjct: 225 DDFPVDTHVFEIAKAIGWVPPVADRNK 251


>ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis]
           gi|223550571|gb|EEF52058.1| Endonuclease III, putative
           [Ricinus communis]
          Length = 291

 Score =  230 bits (586), Expect = 1e-58
 Identities = 108/146 (73%), Positives = 129/146 (88%)
 Frame = +2

Query: 17  DGEKESVLDGLVRTLLSQNTTEVNSKRAFDSLKAAFPTWEQVLAADPKCIENTIKCGGLA 196
           D  +E+VLDGLV+T+LSQNTTEVNS+RAFD+LK+ FPTW+ VLAA+PK IEN I+CGGLA
Sbjct: 80  DTAEETVLDGLVKTVLSQNTTEVNSQRAFDNLKSDFPTWQDVLAAEPKWIENAIRCGGLA 139

Query: 197 VTKASCIKNLLATLLEKKGNLCLEYLRDLPVDQIKAELSGFKGIGPKTVACVLMFNLQRD 376
             KASCIKN+L  LLEKKG +CLEYLRD+ VD+IKAELS FKG+GPKTVACVLMF+LQ++
Sbjct: 140 PAKASCIKNILNCLLEKKGKICLEYLRDMSVDEIKAELSQFKGVGPKTVACVLMFHLQQE 199

Query: 377 DFPVDTHVFRITKAMGWIPDSADREK 454
           DFPVDTHVF I KA+GW+P+ ADR K
Sbjct: 200 DFPVDTHVFEIAKALGWVPEVADRNK 225


>emb|CBI15085.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  228 bits (582), Expect = 3e-58
 Identities = 111/144 (77%), Positives = 127/144 (88%)
 Frame = +2

Query: 23  EKESVLDGLVRTLLSQNTTEVNSKRAFDSLKAAFPTWEQVLAADPKCIENTIKCGGLAVT 202
           +KESVLDGLV  +LSQNTT+VNS+RAF SLK+AFPTW+ VLAAD K IEN I+CGGLAVT
Sbjct: 103 QKESVLDGLVSIILSQNTTDVNSQRAFASLKSAFPTWQDVLAADSKSIENAIRCGGLAVT 162

Query: 203 KASCIKNLLATLLEKKGNLCLEYLRDLPVDQIKAELSGFKGIGPKTVACVLMFNLQRDDF 382
           KASCIK +L+ LLE+KG LCLEYLRDL VD+IK ELS FKGIGPKTVACVLMF+LQRDDF
Sbjct: 163 KASCIKKMLSCLLERKGKLCLEYLRDLTVDEIKTELSHFKGIGPKTVACVLMFHLQRDDF 222

Query: 383 PVDTHVFRITKAMGWIPDSADREK 454
           PVDTHV +I KA+GW+P  ADR+K
Sbjct: 223 PVDTHVIQIGKAIGWVPAVADRKK 246


>ref|XP_002283633.1| PREDICTED: endonuclease III-like [Vitis vinifera]
          Length = 310

 Score =  228 bits (582), Expect = 3e-58
 Identities = 111/144 (77%), Positives = 127/144 (88%)
 Frame = +2

Query: 23  EKESVLDGLVRTLLSQNTTEVNSKRAFDSLKAAFPTWEQVLAADPKCIENTIKCGGLAVT 202
           +KESVLDGLV  +LSQNTT+VNS+RAF SLK+AFPTW+ VLAAD K IEN I+CGGLAVT
Sbjct: 103 QKESVLDGLVSIILSQNTTDVNSQRAFASLKSAFPTWQDVLAADSKSIENAIRCGGLAVT 162

Query: 203 KASCIKNLLATLLEKKGNLCLEYLRDLPVDQIKAELSGFKGIGPKTVACVLMFNLQRDDF 382
           KASCIK +L+ LLE+KG LCLEYLRDL VD+IK ELS FKGIGPKTVACVLMF+LQRDDF
Sbjct: 163 KASCIKKMLSCLLERKGKLCLEYLRDLTVDEIKTELSHFKGIGPKTVACVLMFHLQRDDF 222

Query: 383 PVDTHVFRITKAMGWIPDSADREK 454
           PVDTHV +I KA+GW+P  ADR+K
Sbjct: 223 PVDTHVIQIGKAIGWVPAVADRKK 246


>ref|XP_003608916.1| Ultraviolet N-glycosylase/AP lyase [Medicago truncatula]
           gi|355509971|gb|AES91113.1| Ultraviolet N-glycosylase/AP
           lyase [Medicago truncatula]
          Length = 280

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/142 (73%), Positives = 120/142 (84%)
 Frame = +2

Query: 29  ESVLDGLVRTLLSQNTTEVNSKRAFDSLKAAFPTWEQVLAADPKCIENTIKCGGLAVTKA 208
           E+VLDGLVRT+LSQNTTE NS +AF SLK+ FPTWE V  A+ K +EN I+CGGLA TKA
Sbjct: 81  ETVLDGLVRTILSQNTTEANSNKAFASLKSLFPTWEHVHGAESKELENAIRCGGLAPTKA 140

Query: 209 SCIKNLLATLLEKKGNLCLEYLRDLPVDQIKAELSGFKGIGPKTVACVLMFNLQRDDFPV 388
            CIKNLL+ LLE+KG +CLEYLRDL VD++KAELS FKGIGPKTV+CVLMFNLQ DDFPV
Sbjct: 141 KCIKNLLSCLLERKGKMCLEYLRDLSVDEVKAELSLFKGIGPKTVSCVLMFNLQLDDFPV 200

Query: 389 DTHVFRITKAMGWIPDSADREK 454
           DTH+F I K MGW+P +ADR K
Sbjct: 201 DTHIFEIAKTMGWVPAAADRNK 222


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