BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013471
         (4006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...   769   0.0  
emb|CBI34953.3| unnamed protein product [Vitis vinifera]              751   0.0  
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...   718   0.0  
ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   662   0.0  
ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [S...   619   e-174

>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score =  769 bits (1985), Expect = 0.0
 Identities = 530/1297 (40%), Positives = 706/1297 (54%), Gaps = 48/1297 (3%)
 Frame = -3

Query: 4004 IFSSSFTGDKQTLTSAGVERDGDTSTS-------SSTNHISAVPQPSIETESGRDVPESH 3846
            IFSSSFTGDK+ LT+ GVE++GD            S N++++  + +   ES    P S 
Sbjct: 301  IFSSSFTGDKEALTNGGVEKNGDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASV 360

Query: 3845 LND-VETYVDERGRLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKREDNHSESREAIFNK 3669
             ND VETY+DERGR+RVSRVRAMGIRMTRDLQRNLDLMKEIEQ++               
Sbjct: 361  FNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQDR--------------- 405

Query: 3668 IVFGCPEAFSVNNHNLDATEGRNGVISNSDDDGTDAMEESRTSQTLENRTGLKVSFFEDD 3489
                                      +N D++G   + ++      +N   +++SF +D 
Sbjct: 406  --------------------------TNEDNNGIVTLNKTNEQSIPDNGASIEISFEDDG 439

Query: 3488 TGSKSTEDDDLFTYLVAGSSVTLSPAKNDLSGEHPSDTASVCSWEDGINDEQGVSFSNVV 3309
              +    DD+LF  LVAG+ V +S +   LS   P+D+AS   WE+GI +E+G S  + V
Sbjct: 440  EHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGSCIDNV 499

Query: 3308 KEENQLSLGKETNKXXXXXXXXXXXXXVSGNALPCLDANNKAMSRGSLMEEADLEEAIRR 3129
              E + S+ +E                VS N   C        S+G L EE DL+EAIRR
Sbjct: 500  GVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQEAIRR 559

Query: 3128 SIEDFARDELKFTSSGKENVEISREMDQQNRLIPDLILEKDEIDSLNLPAEKDIRPCKTS 2949
            S+ED   +  K      ++ +I    ++ + +  D   +K++    + P E       + 
Sbjct: 560  SLEDLGGE--KAVGESFKDSDIKEYDEKVHEVKDDAFHKKNDKAEQDFPLENLPEQNGSF 617

Query: 2948 YKAAVGVKELDHVVKNDNTKIIESPHLXXXXXXXXXXXXXXXETLMHRPCEGNLVFEHGI 2769
             K    V++LD V   + ++ I++                  E L +  CE         
Sbjct: 618  CKIVDVVEKLDSVDGMNTSQSIDAS--GRQLTSLLEDNPHKMEVLNNELCEE-------- 667

Query: 2768 LSKATTELGSAHRETPYIHPVSPAEPKAVLLIVNQVLDTSVDGAKESNFVGSICSSKVTS 2589
              K   E G+  RET  ++            ++ + L  +   + +++ + + CS    S
Sbjct: 668  YQKDVGESGNVGRETNEVY------------MIREQLSHASKKSVDTSTLANSCSGD-GS 714

Query: 2588 HVSAALMGDTTEENLVGAYQNYFEAAPRCHSLATTEAANYPEKHSAKELATSVHLEQIRV 2409
            H+S A++G+  +     + +   EAAP  HS  TT+ A  P +   K   T+V  +++  
Sbjct: 715  HISDAMLGNMPDATPADSSKYDSEAAPTWHSNETTDPAIPPGETCIKG-KTAVE-QKLAE 772

Query: 2408 SENGLDVPAEEMRHNINNSTIQNNVEVPIEVSEGSLDEEMLQLRQERINLGEEQRKLERN 2229
              N ++   E+ R N+ NS  ++   V   V+E  L EEM+ L QE +NLG+EQRKLERN
Sbjct: 773  GNNHVNFFMEKER-NMGNSVTEDKKNVQFGVTEDVL-EEMMILDQECLNLGDEQRKLERN 830

Query: 2228 AESVTSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEXXXXXXXXXXXXXXVFLFGARS 2049
            A+ V+SEMFAECQELLQMFGLPYIIAPMEAEAQCAYME              VFLFGARS
Sbjct: 831  ADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 890

Query: 2048 VYKNIFDDRKYVETYFMKDIESDLGLTREQLIRMALLLGSDYTEGVSGIGIVNAIEVVNA 1869
            VYKNIFD+RKYVETYFMKDIE++LGL RE++IRMALLLGSDYTEGVSGIGIVNAIEV+N+
Sbjct: 891  VYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVLNS 950

Query: 1868 FPEEAGLKKFREWIESPDPTILGKLDTQTGAGSKKRGSKASYNGEDCSKEMNGGIATGGD 1689
            FPEE GL KFREW+ESPDP ILGK++ +TG+ S+KRGSK     +  SK  N   A   +
Sbjct: 951  FPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQSHSK--NNMDAFDEN 1008

Query: 1688 VSEGHDNKQSADDIHKTQRIFMDKHRNVSKNWHIPSSFPSEAVVSAYVSPQVDKSTDPFS 1509
            VS+   N +S DDI   ++IFMDKHRNVSKNWHIPSSFPSE V+SAY SPQVD+ST+PFS
Sbjct: 1009 VSQNEHN-ESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFS 1067

Query: 1508 WGKPDLLVLRKLCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSK 1329
            WGKPDL VLRKLC EKFGW NQKADELL+PVLKEYNKHETQLRLEAFYTFNERFAKIRSK
Sbjct: 1068 WGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSK 1127

Query: 1328 RIKKAVKGITGKRSSDVMDPLPEEASTK----RISPSGPDRIKENSFVE-EDTIAENECS 1164
            RIKKAVKGITG ++S+++D   +E S +    + SPS  D  +E    E   T A N  +
Sbjct: 1128 RIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPSKLDNKQEIPINEIGSTAARNGSN 1187

Query: 1163 TSRKLTVKQSRRK--KNSVPVSTEAGEPLIEEEQ----XXXXXXXXXXXXXXXXXXXXXX 1002
             + K T KQSRR+  +  VP   E+ EP ++  Q                          
Sbjct: 1188 ATAKTTPKQSRRRRIRKPVPSDGESAEPPVQAGQKQCNDTGSSKNGRGKGRKKGRGVRRG 1247

Query: 1001 XXXXXXKETPGHESTKTXXXXXXXXNDELEMQLENTERLYEMRESRRPRKQVKYTEDDPE 822
                  +E PG E + T        N+E E+  +  +   E+R S+RPRK V Y  DD E
Sbjct: 1248 RGRSRIQENPGSEISGTSSSDCNSGNEE-EVPAQKLDGSNEVRRSKRPRKAVNYANDDLE 1306

Query: 821  TAGLSNPTNQRDIQGLDKE-VEQEP-----VCEDICKD-AGSNLSQKDGEPFSEDGC-DY 666
                    +Q + +  ++E VE EP     +C D   D +G N  + +     ED C DY
Sbjct: 1307 IDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFSGKNQQKAEDSSPGEDLCGDY 1366

Query: 665  HEKGGGFCLDEDKDENDSPQVVSTSTRFPEDVNVSLEDGFSADYLAMGGGFCMDEGEPD- 489
             E  G  C+    DEN+  Q+ S       D + +  D FS DYL MGGGFC++E E D 
Sbjct: 1367 PETEGVMCM----DENEIGQLDS------RDDDPTFADEFSEDYLKMGGGFCVEEDEKDK 1416

Query: 488  -----------TEPVQLFPSPTRDLDESTGRRVDDLIIT-------DSLNP-LNCIVDHD 366
                        + +   P P  +L       V  L  T        +  P     +D  
Sbjct: 1417 DHNARTYDPAKADTIYENPDPESELAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDCP 1476

Query: 365  STRVGVLQGDRLPKGDPSTTSTA-CLTPMPFLRRKRR 258
            +  +G+   +    GD + T+T   L  MPFLR+KRR
Sbjct: 1477 NATIGLSMPEN--TGDDTGTNTVKALRAMPFLRKKRR 1511


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  751 bits (1939), Expect = 0.0
 Identities = 522/1297 (40%), Positives = 693/1297 (53%), Gaps = 48/1297 (3%)
 Frame = -3

Query: 4004 IFSSSFTGDKQTLTSAGVERDGDTSTS-------SSTNHISAVPQPSIETESGRDVPESH 3846
            IFSSSFTGDK+ LT+ GVE++GD            S N++++  + +   ES    P S 
Sbjct: 301  IFSSSFTGDKEALTNGGVEKNGDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASV 360

Query: 3845 LND-VETYVDERGRLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKREDNHSESREAIFNK 3669
             ND VETY+DERGR+RVSRVRAMGIRMTRDLQRNLDLMKEIEQ++               
Sbjct: 361  FNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQDR--------------- 405

Query: 3668 IVFGCPEAFSVNNHNLDATEGRNGVISNSDDDGTDAMEESRTSQTLENRTGLKVSFFEDD 3489
                                      +N D++G   + ++      +N   +++SF +D 
Sbjct: 406  --------------------------TNEDNNGIVTLNKTNEQSIPDNGASIEISFEDDG 439

Query: 3488 TGSKSTEDDDLFTYLVAGSSVTLSPAKNDLSGEHPSDTASVCSWEDGINDEQGVSFSNVV 3309
              +    DD+LF  LVAG+ V +S +   LS   P+D+AS   WE+GI +E+G S  + V
Sbjct: 440  EHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGSCIDNV 499

Query: 3308 KEENQLSLGKETNKXXXXXXXXXXXXXVSGNALPCLDANNKAMSRGSLMEEADLEEAIRR 3129
              E + S+ +E                VS N   C        S+G L EE DL+EAIRR
Sbjct: 500  GVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQEAIRR 559

Query: 3128 SIEDFARDELKFTSSGKENVEISREMDQQNRLIPDLILEKDEIDSLNLPAEKDIRPCKTS 2949
            S+ED   ++    S    ++   +E D++         + D +D +N           TS
Sbjct: 560  SLEDLGGEKAVGESFKDSDI---KEYDEK---------KLDSVDGMN-----------TS 596

Query: 2948 YKAAVGVKELDHVVKNDNTKIIESPHLXXXXXXXXXXXXXXXETLMHRPCEGNLVFEHGI 2769
                   ++L  +++       ++PH                E L +  CE         
Sbjct: 597  QSIDASGRQLTSLLE-------DNPH--------------KMEVLNNELCEE-------- 627

Query: 2768 LSKATTELGSAHRETPYIHPVSPAEPKAVLLIVNQVLDTSVDGAKESNFVGSICSSKVTS 2589
              K   E G+  RET  ++            ++ + L  +   + +++ + + CS    S
Sbjct: 628  YQKDVGESGNVGRETNEVY------------MIREQLSHASKKSVDTSTLANSCSGD-GS 674

Query: 2588 HVSAALMGDTTEENLVGAYQNYFEAAPRCHSLATTEAANYPEKHSAKELATSVHLEQIRV 2409
            H+S A++G+  +     + +   EAAP  HS  TT+ A  P +   K   T+V  +++  
Sbjct: 675  HISDAMLGNMPDATPADSSKYDSEAAPTWHSNETTDPAIPPGETCIKG-KTAVE-QKLAE 732

Query: 2408 SENGLDVPAEEMRHNINNSTIQNNVEVPIEVSEGSLDEEMLQLRQERINLGEEQRKLERN 2229
              N ++   E+ R N+ NS  ++   V   V+E  L EEM+ L QE +NLG+EQRKLERN
Sbjct: 733  GNNHVNFFMEKER-NMGNSVTEDKKNVQFGVTEDVL-EEMMILDQECLNLGDEQRKLERN 790

Query: 2228 AESVTSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEXXXXXXXXXXXXXXVFLFGARS 2049
            A+ V+SEMFAECQELLQMFGLPYIIAPMEAEAQCAYME              VFLFGARS
Sbjct: 791  ADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 850

Query: 2048 VYKNIFDDRKYVETYFMKDIESDLGLTREQLIRMALLLGSDYTEGVSGIGIVNAIEVVNA 1869
            VYKNIFD+RKYVETYFMKDIE++LGL RE++IRMALLLGSDYTEGVSGIGIVNAIEV+N+
Sbjct: 851  VYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVLNS 910

Query: 1868 FPEEAGLKKFREWIESPDPTILGKLDTQTGAGSKKRGSKASYNGEDCSKEMNGGIATGGD 1689
            FPEE GL KFREW+ESPDP ILGK++ +TG+ S+KRGSK                     
Sbjct: 911  FPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSK--------------------- 949

Query: 1688 VSEGHDNKQSADDIHKTQRIFMDKHRNVSKNWHIPSSFPSEAVVSAYVSPQVDKSTDPFS 1509
                  + +S DDI   ++IFMDKHRNVSKNWHIPSSFPSE V+SAY SPQVD+ST+PFS
Sbjct: 950  ------HNESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFS 1003

Query: 1508 WGKPDLLVLRKLCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSK 1329
            WGKPDL VLRKLC EKFGW NQKADELL+PVLKEYNKHETQLRLEAFYTFNERFAKIRSK
Sbjct: 1004 WGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSK 1063

Query: 1328 RIKKAVKGITGKRSSDVMDPLPEEASTK----RISPSGPDRIKENSFVE-EDTIAENECS 1164
            RIKKAVKGITG ++S+++D   +E S +    + SPS  D  +E    E   T A N  +
Sbjct: 1064 RIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPSKLDNKQEIPINEIGSTAARNGSN 1123

Query: 1163 TSRKLTVKQSRRK--KNSVPVSTEAGEPLIEEEQ----XXXXXXXXXXXXXXXXXXXXXX 1002
             + K T KQSRR+  +  VP   E+ EP ++  Q                          
Sbjct: 1124 ATAKTTPKQSRRRRIRKPVPSDGESAEPPVQAGQKQCNDTGSSKNGRGKGRKKGRGVRRG 1183

Query: 1001 XXXXXXKETPGHESTKTXXXXXXXXNDELEMQLENTERLYEMRESRRPRKQVKYTEDDPE 822
                  +E PG E + T        N+E E+  +  +   E+R S+RPRK V Y  DD E
Sbjct: 1184 RGRSRIQENPGSEISGTSSSDCNSGNEE-EVPAQKLDGSNEVRRSKRPRKAVNYANDDLE 1242

Query: 821  TAGLSNPTNQRDIQGLDKE-VEQEP-----VCEDICKD-AGSNLSQKDGEPFSEDGC-DY 666
                    +Q + +  ++E VE EP     +C D   D +G N  + +     ED C DY
Sbjct: 1243 IDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFSGKNQQKAEDSSPGEDLCGDY 1302

Query: 665  HEKGGGFCLDEDKDENDSPQVVSTSTRFPEDVNVSLEDGFSADYLAMGGGFCMDEGEPD- 489
             E  G  C+    DEN+  Q+ S       D + +  D FS DYL MGGGFC++E E D 
Sbjct: 1303 PETEGVMCM----DENEIGQLDS------RDDDPTFADEFSEDYLKMGGGFCVEEDEKDK 1352

Query: 488  -----------TEPVQLFPSPTRDLDESTGRRVDDLIIT-------DSLNP-LNCIVDHD 366
                        + +   P P  +L       V  L  T        +  P     +D  
Sbjct: 1353 DHNARTYDPAKADTIYENPDPESELAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDCP 1412

Query: 365  STRVGVLQGDRLPKGDPSTTSTA-CLTPMPFLRRKRR 258
            +  +G+   +    GD + T+T   L  MPFLR+KRR
Sbjct: 1413 NATIGLSMPEN--TGDDTGTNTVKALRAMPFLRKKRR 1447


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
            gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
            putative [Ricinus communis]
          Length = 1641

 Score =  718 bits (1853), Expect = 0.0
 Identities = 517/1326 (38%), Positives = 698/1326 (52%), Gaps = 77/1326 (5%)
 Frame = -3

Query: 4004 IFSSSFTGDKQTLTSAGVERDGDTS--------TSSSTNHISAVPQPSIETESGRDVPES 3849
            IFSSSFTGDKQ LTS GV+R+G+          T  S N +++  + +  + S +D P  
Sbjct: 372  IFSSSFTGDKQLLTSTGVQRNGNKQQQAPTMNPTFDSMNCVTSTSKSNAVSGSVQDEPRR 431

Query: 3848 HLN-DVETYVDERGRLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKREDNHSESREAIFN 3672
              + DVETY+DE GR+RVSRVRAMG+RMTRDLQRNLDLMKEIEQE+     +   ++   
Sbjct: 432  VFDEDVETYLDENGRIRVSRVRAMGMRMTRDLQRNLDLMKEIEQERTHAIETAPSQSELT 491

Query: 3671 KIVFGCPEAFSVNNHNLDATEGRNGVISNSDDDGTDAME-ESRTSQTLENRTG-LKVSFF 3498
            +   G P++F     ++++          S D  +D+++   R  Q++ N  G +++SF 
Sbjct: 492  RDKIGSPKSFPSKKLHVES----------SHDKHSDSVKLNERNQQSMLNDEGSIQISFE 541

Query: 3497 EDDTGSKSTEDDDLFTYLVAGSSVTLSPAKNDLSGEHPSDTASVCSWEDGINDEQGVSFS 3318
             D        DDD+FT LVAG  V +    N  S    SD+AS   WE+G  + +G S S
Sbjct: 542  ADGRSKCLDSDDDVFTSLVAGQPVNIPSVDNITSRIQTSDSASDGDWEEGTIETRGNSSS 601

Query: 3317 NVVKEENQLSLGKETNKXXXXXXXXXXXXXVSGNALPCLDANNKAMSRGSLMEEADLEEA 3138
            N +  E    L ++                   ++ P    +    SRG + EEADL+EA
Sbjct: 602  NNLALETNPPLKEKNISDDSEVEWEDGGGDHENSSFP--SESKMPASRGYMEEEADLQEA 659

Query: 3137 IRRSIEDFARDELKFTSSGKENVEISREMDQQNRLIPDLILEKDEIDSLNLPAEKDIRPC 2958
            IRRS+ED   +    T S  E ++IS   D+        + ++D    L LP EKD+   
Sbjct: 660  IRRSLEDLGGEIFNNTLSEHEKLKIS---DKNVYKDVGFLDQEDNTGGLILP-EKDVTQQ 715

Query: 2957 KTSYKAAVGVKELDHVVKNDNTKIIESPHLXXXXXXXXXXXXXXXETLMHRPCEGNLVFE 2778
               +       ++D V + D +++  S                  + L ++  E ++   
Sbjct: 716  DQPFSEISATGKIDKVGQYDISQVFSSQS---QLAFSEAHDPDNMDILTNKLYERDMGSN 772

Query: 2777 HGILSKATTELGSAHRETPYIHPVSPAEPKAVLLIVNQVLDTSVDGAKESNFVGSICSSK 2598
             G  S+A    GS  R        +P E   +L    Q  +T+V+       +G   S+K
Sbjct: 773  DGQPSRALNMEGSVCRGMSSAESAAPLETHVIL---KQFSETNVED------MGLSTSTK 823

Query: 2597 VTS---HVSAALMGDTTEENLVGAYQNYFEAAPRCHSLATTEAANYPEKHSAKELATSVH 2427
            + S   ++S A   + +  + +   +N  EA P            Y +       +TSV 
Sbjct: 824  MRSGISNISKAAWSNVSFASSIDDDRNKVEAEPSVLVNEEKRPETYCQSVKITNPSTSVM 883

Query: 2426 LEQIRVSENGLDVPAE-----EMRHNINNST-----IQNNVEVPIEVSEGSLDEEMLQLR 2277
               I ++  G DV ++        H  N        + +N  +  + SE +L EE+L L 
Sbjct: 884  EPSINLAI-GTDVESKLAGEKNSGHLFNEKKQDMEKVVSNENLREDFSEVTLQEEILILG 942

Query: 2276 QERINLGEEQRKLERNAESVTSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEXXXXXX 2097
            QER+NLG EQ+KLERNAESV+SEMFAECQELLQMFGLPYIIAPMEAEAQCAYME      
Sbjct: 943  QERMNLGSEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1002

Query: 2096 XXXXXXXXVFLFGARSVYKNIFDDRKYVETYFMKDIESDLGLTREQLIRMALLLGSDYTE 1917
                    VFLFGAR+VYKNIFDDRKYVETYFMKDIE +LGLTRE+LIRMALLLGSDYTE
Sbjct: 1003 GVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIERELGLTREKLIRMALLLGSDYTE 1062

Query: 1916 GVSGIGIVNAIEVVNAFPEEAGLKKFREWIESPDPTILGKLDTQTGAGSKKRGSKASYNG 1737
            G+SGIGIVNAIEVVNAFPEE GL+KFREWI SPDPTILGKLD + G   +++G   S N 
Sbjct: 1063 GISGIGIVNAIEVVNAFPEEDGLEKFREWIYSPDPTILGKLDVRDGRSMRRKGESDSANN 1122

Query: 1736 EDCSKEMNGGIATGGDVSEGHDNKQSADDIHKTQRIFMDKHRNVSKNWHIPSSFPSEAVV 1557
                   N   + G  VSE H  + SAD   + ++IFMDKHRNVSKNWH+PSSFPSEAV+
Sbjct: 1123 -------NVVDSFGKKVSESHKEEDSADHTQEIRQIFMDKHRNVSKNWHVPSSFPSEAVI 1175

Query: 1556 SAYVSPQVDKSTDPFSWGKPDLLVLRK------LCWEKFGWSNQKADELLVPVLKEYNKH 1395
            SAY+SPQVDKST+PF+WGKPDL VLR+      +CWEKF W  QK+DELL+PVLKEYNKH
Sbjct: 1176 SAYMSPQVDKSTEPFTWGKPDLHVLRRQVMIFIICWEKFAWGVQKSDELLLPVLKEYNKH 1235

Query: 1394 ETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGKRSSDVMDPLPEEASTKR----ISP-- 1233
            ETQLRLEAFYTFNERFAKIRS+RIKKA+KGITG +SS++MD   +++S  R    I P  
Sbjct: 1236 ETQLRLEAFYTFNERFAKIRSRRIKKALKGITGYQSSEMMDDDVKDSSKSRKKRTIGPGE 1295

Query: 1232 ---SGPDRIKENSFVEEDTIAENECSTSRKLTVKQSRRKKNSVPVSTEAGEPLIE-EEQX 1065
               S PD   +    E + +  ++  +  K T K+SR++    PV TE   P    + + 
Sbjct: 1296 SVDSEPDAALKR---EREGLFSDKTDSLEKSTTKRSRKRTAGQPVLTERENPGQHLQAEG 1352

Query: 1064 XXXXXXXXXXXXXXXXXXXXXXXXXXXKETPGHESTKTXXXXXXXXNDELEMQLENTERL 885
                                        +  G E + +        +DELE+++E +E  
Sbjct: 1353 RRKTHKGQCGDGRGKGRGRGRGRGRGRGKGSGIELSDSSYDYVSGDDDELEVRIEKSEGP 1412

Query: 884  YEMRESRRPRKQVKYTEDDPETAGLSNPTNQRDIQGLDKEVEQEPVCEDICK--DAGSNL 711
             E+R S R RK   YT D  +   + +  ++ D Q  +   E + +   I K  DA S L
Sbjct: 1413 QELRRSTRSRKPANYTLDGFK-VDVDSAVDRGDKQSNESAAELD-LFGVIGKSTDASSCL 1470

Query: 710  SQKD----GEPFSEDGCDYHEKGGGFCLDEDKDENDSPQVVSTSTRFPEDVNVSLEDGFS 543
            + K+     +   ED    + + G  CL +D           +  ++P   +V      S
Sbjct: 1471 NGKEQHKVEDALPEDFSKDYLENGQHCLTDDN---------GSEPKYPGGASV------S 1515

Query: 542  ADYLAMGGGFCMDEGEPDTEPVQLFPSPTRDLDE------STGRRVDDLIITDSLNPLNC 381
             DYL MGGGFCMDE E  T+      SP+    E      +    +++    + L PL C
Sbjct: 1516 KDYLKMGGGFCMDESETCTDQ-DAAHSPSMPAFEEMADASNVSGSMEETDRGEGLLPLVC 1574

Query: 380  IV--------DHDSTRVGVLQ-----------GDR------LPKGDPSTTSTACLTPMPF 276
             +        D   T     +           GD       LP+   S T    L+ MPF
Sbjct: 1575 SIKRTLNDMQDGGKTNAHDAEPSTDCLNATDIGDHSEASLCLPETTGSKTIAPTLSAMPF 1634

Query: 275  LRRKRR 258
            L+RKRR
Sbjct: 1635 LKRKRR 1640


>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
            max]
          Length = 1707

 Score =  662 bits (1707), Expect = 0.0
 Identities = 491/1334 (36%), Positives = 667/1334 (50%), Gaps = 85/1334 (6%)
 Frame = -3

Query: 4004 IFSSSFTGDKQTLTSAGVERDGDTSTSSSTNHISAVPQPSI------ETESG---RDVPE 3852
            IFSSSFTGDKQ LTS  +E++ DT       H S     SI       T SG    +  E
Sbjct: 455  IFSSSFTGDKQELTSTSLEKNKDTQQKVQGVHPSQNLTDSIVAGNDSNTSSGLVHNEPGE 514

Query: 3851 SHLNDVETYVDERGRLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKREDNHSESREAIFN 3672
                 ++TY+DERGR RVSR+RAMG+RMT D+QRNLDL+KEIEQE+   N + +   + N
Sbjct: 515  PADESIQTYLDERGRFRVSRLRAMGMRMTCDIQRNLDLLKEIEQERAYVNKAANIGTVEN 574

Query: 3671 KIVFGCPEAFSVNNHNLDATEGRNGVISNSDDDGTDAMEES-RTSQTLENR-TGLKVSFF 3498
                G  E+  +             ++  S +   D + ++ +  QT+ +R T +++SF 
Sbjct: 575  AENNGPYESSGIQ------------LVGKSQEMNVDLVGQNMQNEQTMLDRDTLIEISFE 622

Query: 3497 EDDTGSKSTEDDDLFTYLVAGSSVTLSPAKNDLSGEHPSDTASVCSWEDGINDEQGVSFS 3318
             D     + ++DD+F+ LV G+ V +  A +  + E PS + S C WE+GI + +  ++ 
Sbjct: 623  YDCKNKFANDEDDIFSSLVGGNPVAIFGADDTAATEQPSHSDSDCDWEEGILEGKSNAYP 682

Query: 3317 NVVKEENQLSLGKETNKXXXXXXXXXXXXXVSGNALPCLDANNKAMSRGSLMEEADLEEA 3138
                 E + S+  +                 + + L     + K  S+G L EE+DL+EA
Sbjct: 683  EHDVVELKSSVADDHKNNEREVEWEEGDCDGANSTL----LSGKLASQGWLEEESDLQEA 738

Query: 3137 IRRSIEDFARDELKFTSSGKENVEI-SREMD-----QQNRLIPDLILEKDEIDSLNLPAE 2976
            IRRS+E     +LK   +  E+      ++D       +    D +   D +  LN    
Sbjct: 739  IRRSLESIGDMKLKCMPAVDEHSNTYENKLDCGLEHGDDLYYSDPVDLNDNVGFLNNKNR 798

Query: 2975 KDIRPCKTSYKAAVGVKELDHVVKNDNTKIIESPHLXXXXXXXXXXXXXXXETLMHRPCE 2796
            +D       ++   G K+ D V  N+     ++ H                         
Sbjct: 799  EDSTEKNELHEIEDGDKKHDFVSGNNE----QTFHF------------------------ 830

Query: 2795 GNLVFEHGILSKATTELGSAHRETPYIHPVSPAEPKAVLLIVNQVLDTSVDGAKESNFVG 2616
                  HG  SK++    S + E   I   +P    +    V+ + DT+V      + V 
Sbjct: 831  ------HGSQSKSSVTFNSNNTE---ILIDTPCRMDSHSCFVDSISDTNV---MTKDLVP 878

Query: 2615 SICSSKVTSHVSAALM---GDTTEENLVGAYQ----NYF-EAAPRCHSLATTEAANYPEK 2460
             +    +  H    +     +T++ + VGA +    NY  E+ P  +S  TT+ A   E 
Sbjct: 879  MVAEQLLDKHDDGKVSFYCDNTSKVDPVGATEEGKKNYIQESEPLSNSTDTTKPAILVES 938

Query: 2459 HSAKELATSVHLEQIRVSENGLDVPAEEMRHNINNSTIQNNVEVPIEVSEGSLDEEMLQL 2280
             S K     + +E    SE+      EE   ++ N  +      P   +E SL+EEM  L
Sbjct: 939  -SLKGSTEDLDIEPKLPSEDSNRNFYEERNSSLGNDVVNTPGHFPAHAAEVSLEEEMQIL 997

Query: 2279 RQERINLGEEQRKLERNAESVTSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEXXXXX 2100
             QE INL  EQRKLERNAESV SE+F ECQELLQMFGLPYIIAPMEAEAQCAY+E     
Sbjct: 998  GQEYINLENEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELEKLV 1057

Query: 2099 XXXXXXXXXVFLFGARSVYKNIFDDRKYVETYFMKDIESDLGLTREQLIRMALLLGSDYT 1920
                     V LFGARSVYKNIFDDRKYVETYFM+DIE +LGLTRE+LIRMALLLGSDYT
Sbjct: 1058 DGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMEDIEKELGLTREKLIRMALLLGSDYT 1117

Query: 1919 EGVSGIGIVNAIEVVNAFPEEAGLKKFREWIESPDPTILGKLDTQTGAGSKKRGSK--AS 1746
            EGVSGIGIVNAIEVVNAFPEE GL KFR+W+ESPDPTILG+LD  +G+ S+K+GSK    
Sbjct: 1118 EGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTILGRLDANSGSNSRKKGSKIEEK 1177

Query: 1745 YNGEDCSKEMNGGIATGGDVSEGHDNKQSADDIHKTQRIFMDKHRNVSKNWHIPSSFPSE 1566
             N   C+ + +   A   ++    +  + +D I + ++ F +KHRNVSKNWHIPSSFPS+
Sbjct: 1178 MNSSSCNVKES---AVMQNICHAQEQNELSDYIQEIKQTFFNKHRNVSKNWHIPSSFPSD 1234

Query: 1565 AVVSAYVSPQVDKSTDPFSWGKPDLLVLRK------LCWEKFGWSNQKADELLVPVLKEY 1404
             V+SAY SP VDKST+PF+WGKPD LVLRK      LCWEKFGW+ QKADEL++PVLKEY
Sbjct: 1235 TVISAYYSPHVDKSTEPFTWGKPDHLVLRKXVHMFRLCWEKFGWTGQKADELILPVLKEY 1294

Query: 1403 NKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGKRSSDVMDPLPEEASTKRISPSGP 1224
            NK ETQLRLEAFY FNERFAKIRSKRIKKAVKGITGK+ SD++D   EE S  R +   P
Sbjct: 1295 NKRETQLRLEAFYNFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAEEFSKSRKTGREP 1354

Query: 1223 DRIKENSFVEEDTIAENECSTSRKLTVKQSR------------RKKNSVPVST------E 1098
            + I     +E     E      RK  +KQSR            +K N  P S       E
Sbjct: 1355 EDIT----LETSRGIEGNLEGRRKSKIKQSRKNDTVAKEQSKKKKVNDDPSSAPGTSEIE 1410

Query: 1097 AGEPLIEEEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETPGHESTKTXXXXXXXXNDE 918
              +P ++ E+                             +    +S +T         D+
Sbjct: 1411 NLQPSLQIEEEQHDGKALIRNRSGRGRGRIMGIKRGRDNKGLSFQSCETEASSGSSDIDD 1470

Query: 917  LEMQLENTERLYEMRESRRPRKQVKYTEDDPETAGLSNPTNQRDIQGLDKEVEQE--PVC 744
               ++       ++R S R RK V Y+  +PE     +  ++R+  G  +E        C
Sbjct: 1471 HGPRVHVDRVPKDVRRSMRSRKPVNYSFKEPEDEDSDDSFDRRNQTGPIEENLSHILGAC 1530

Query: 743  EDICKD--AGSNLSQKDGEPFSEDGCDYHEKGGGFCLDEDKDENDSPQVVSTSTRFPEDV 570
            ED   D       S  +  P      D  E GG FC D            +  T  P   
Sbjct: 1531 EDGATDFSMAKECSAMNFPPEENLPTDSLESGGWFCTD------------AGETCHPGTG 1578

Query: 569  NVSLEDGFSADYLAMGGGFCMDEGEP----------DTEPVQL---FPSPTRDLDEST-G 432
            N    D    DYL MGGGFC+D+G+           DT  V     FP  +  LDE+   
Sbjct: 1579 NQDSSD----DYLKMGGGFCLDDGDTGVKQDTSDNVDTATVDYNADFPHGSDYLDETNRD 1634

Query: 431  RRVDDLIITDSLNPLNCI----------------VDHDSTRVGVLQGDRLPKGDPSTTST 300
            +   D++ + +  P N I                  +D + + VL+ +       S  ST
Sbjct: 1635 KSSSDILFSGAEKPENGIQGGGPFNIEPNDLASASSYDHSDIAVLKQENTRNN--SGAST 1692

Query: 299  ACLTPMPFLRRKRR 258
               + MPFL+R+R+
Sbjct: 1693 GAFSAMPFLKRRRK 1706


>ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
            gi|241922167|gb|EER95311.1| hypothetical protein
            SORBIDRAFT_01g043560 [Sorghum bicolor]
          Length = 1489

 Score =  619 bits (1596), Expect = e-174
 Identities = 478/1308 (36%), Positives = 638/1308 (48%), Gaps = 57/1308 (4%)
 Frame = -3

Query: 4004 IFSSSFTGDKQTL------------TSAGVERDGDTSTSSSTNHISAVPQPSIETESGRD 3861
            IFSSSFTGDKQ L            T +  E +    TS+ TN +  +  P+    S   
Sbjct: 317  IFSSSFTGDKQMLAQRREKEHNVENTKSKKEINSSVFTSNPTNSLGTMKPPNSSKPSRDF 376

Query: 3860 VPESHLNDVETYVDERGRLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKRED-------N 3702
             P     DVETY DERGR+RVSRVRAMGIRMTRD+QRNLD +KE EQ K +        N
Sbjct: 377  GP-----DVETYRDERGRIRVSRVRAMGIRMTRDIQRNLDFIKENEQVKSKGQTQTSVHN 431

Query: 3701 HSESREA--IFNKIVFGCPEAFSVNNHNLDATE-GRNGVISNSDDDGTDAMEESRTSQTL 3531
             S   E   +F + +F   +  S  N + D +E  R    ++S  +  D + ES      
Sbjct: 432  GSTGNEEPPVFPEHLFESNKLQSSCNPDEDLSETDRENHQTSSQVEAADNISESSCHG-- 489

Query: 3530 ENRTGLKVSFFEDDTGSKSTEDDDLFTYLVAGSSVTLSPAKNDLSGEHPSDTASVCSWED 3351
             N+  +++SF  D T  K   D+D+F  LV+GS+  +    N L         S C WED
Sbjct: 490  -NKEAIEISFSVDQTELKDG-DEDIFLQLVSGSTSNMFSGNNCLVKNTEESEDSECIWED 547

Query: 3350 GINDEQGVSFSNVVKEENQLSLGKETNKXXXXXXXXXXXXXVSGNALPCLDANNKAMSRG 3171
            G+  E G S   V K +++ SL +  +                 ++    + N     +G
Sbjct: 548  GVI-EAGTSPMKVGKNDHKSSLPENCSDDEMEWEEGDSFAPGVASSS---EHNPCNAPKG 603

Query: 3170 SLMEEADLEEAIRRSIEDFARDELKFTSSG--KENVEISREMDQQNRL--IPDLILEKDE 3003
             L E A ++EAIRRS+EDF +   +  S+G  +E+VE  R +   N +  I + + E D 
Sbjct: 604  DLEEAALVQEAIRRSLEDFEKKASENVSTGDIQESVE-DRSLQFSNNVPKISEALGENDS 662

Query: 3002 ------IDSLNLPAEKDIRPCKTSYKAAVGVKELDHVVKNDNTKIIESP-HLXXXXXXXX 2844
                  ++ +N     +I   K       G+  +D        +++++  HL        
Sbjct: 663  HSGVPVVEEINNETRTEINCDKDDMVQGTGLLGIDRQENETRPQLVKNDGHLGSVPLCTT 722

Query: 2843 XXXXXXXETLMHRPCEGNLVFEHGILSKATTELGSAHRETPYIHPVSPAEPKAVLLIVNQ 2664
                     L  +P          ++   T   G+A         V   +  + L I+N 
Sbjct: 723  FTS-----NLAEKPSNSTEANGEDVMIFTTKLPGTA---------VGDCDKTSNLNIMNS 768

Query: 2663 VLDTSVDGAKESNFVGSICSSKVTSH----VSAALMGDTTEENLVGAYQNYFEAAPRCHS 2496
                  D +K SN + S  + +  SH    +   L+ DT E+                  
Sbjct: 769  ------DQSKCSNDIAS--TGETLSHQKDLLIDELLADTAEQ------------------ 802

Query: 2495 LATTEAANYPEKHSAKELATSVHLEQIRVSENGLDVPAEEMRHNINNSTIQNNVEVPIEV 2316
                           KE AT V L+    SE    +   ++  N +N TI          
Sbjct: 803  ---------------KENATQVDLK-FATSE----IDYTQICDNDDNHTI---------- 832

Query: 2315 SEGSLDEEMLQLRQERINLGEEQRKLERNAESVTSEMFAECQELLQMFGLPYIIAPMEAE 2136
            S   +D E+ +LRQE+I+LG E+RKLE +AESV+SEMFAECQELLQMFGLPYIIAP EAE
Sbjct: 833  SASYVDAELSRLRQEQIDLGHERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPTEAE 892

Query: 2135 AQCAYMEXXXXXXXXXXXXXXVFLFGARSVYKNIFDDRKYVETYFMKDIESDLGLTREQL 1956
            AQCAYME              VFLFGAR+VYKNIFDDRKYVETYFMKDIES+LGLTREQL
Sbjct: 893  AQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIESELGLTREQL 952

Query: 1955 IRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEAGLKKFREWIESPDPTILGKLDTQTGA 1776
            IRMALLLGSDYTEGVSGIGIVNAIEVV+AFPEE GL+KF+EWIESPDP+I GKL  +   
Sbjct: 953  IRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQKFKEWIESPDPSIFGKLHVEASG 1012

Query: 1775 GSKKRGSKASYNGEDCSKEMNGGIATGGDVSEGHDNKQSADDIHKTQRIFMDKHRNVSKN 1596
             SKKR  K   N  D       G     +  +G D+KQS+++    + IFM KHRNVSKN
Sbjct: 1013 RSKKR--KLGGNDSD-----GKGKGLEPECIQGSDDKQSSNEAEHVKEIFMSKHRNVSKN 1065

Query: 1595 WHIPSSFPSEAVVSAYVSPQVDKSTDPFSWGKPDLLVLRKLCWEKFGWSNQKADELLVPV 1416
            WHIP++FPSE+VV+AY+SPQVD S +PFSWG+PDL +LRKLCWE+FGW  +KADELL+PV
Sbjct: 1066 WHIPATFPSESVVNAYISPQVDNSMEPFSWGRPDLGLLRKLCWERFGWGKEKADELLIPV 1125

Query: 1415 LKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGKRSSDVMDPLPEEASTKRI- 1239
            L+EYNKHETQLR+EAFY+FNERFAKIRSKRIKKA+KGITGK   D  +P P+  ST +  
Sbjct: 1126 LREYNKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGITGKSFLDTDEPEPDNPSTSKTI 1185

Query: 1238 ---------SPSGPDRIKENSFVEEDTIAENECSTSRKLTVKQSRRKKNSVPVSTEAGEP 1086
                        G  + K NS +      E+    +  L       ++N+     + G P
Sbjct: 1186 KKKEANSSSHARGRGKRKNNSGIRNMESQEDNVGDTNSLADTVEITRENNNTTKRKRGSP 1245

Query: 1085 LIEEEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETPGHESTKTXXXXXXXXNDELEMQ 906
                +                               T   E  +          D  +  
Sbjct: 1246 CGRSK------------------GRGRSRTNAGNDATISQEDYEIEYSTSASDEDSCKRH 1287

Query: 905  LEN--TERLYEMRESRRPRKQVKYTEDDPETAGLSNPTNQRDIQGLDKEVEQEPVCEDIC 732
              +  +E     R SR+ RKQV Y ED  E      P +Q D    +    Q     D+ 
Sbjct: 1288 SNSYGSEGRALRRSSRK-RKQVTYMEDGHEAYDNDVPMHQND----ENNPGQAAAVADMA 1342

Query: 731  -KDAGSNLSQKDGEPFSEDGCDYHEKGGGFCLDEDKDENDSPQVVSTSTRFPEDVNVSLE 555
             +D G NL  +D    SE        G G   D ++D  D            ED  V   
Sbjct: 1343 GEDTGFNLYHQD---TSELNSSRMHIGAGTTEDINEDSQD--------FELREDNQV--- 1388

Query: 554  DGFSADYLAMGGGFCMDEGE-PDTEP------VQLFPSPTRDLDESTGRRVDDLIITDSL 396
            D    DYL  GGGFCM+EGE  + EP       ++ P P+   D   G       +++S 
Sbjct: 1389 DSAPKDYLFSGGGFCMEEGEGNEQEPAGHQSGAEIEPEPSGPCDAMDG-------VSESC 1441

Query: 395  NPLNCIVDHDSTRVGVLQGDRLPKGDPSTTSTACLTPMPFLRRKRRKT 252
               +     + T    ++            ++   + MP L ++RRK+
Sbjct: 1442 KSASLSTAGECTENASMEARGASSSQQRRKASRGFSAMPTLTKRRRKS 1489