BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013469
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1...   258   2e-66
ref|XP_002521322.1| protein with unknown function [Ricinus commu...   255   1e-65
ref|XP_002273931.1| PREDICTED: transcription initiation factor T...   249   9e-64
ref|NP_175816.1| transcription initiation factor TFIID subunit D...   235   1e-59
gb|AFK39086.1| unknown [Medicago truncatula] gi|388516043|gb|AFK...   235   1e-59

>ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1|
           unknown [Populus trichocarpa]
           gi|222846845|gb|EEE84392.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  258 bits (659), Expect = 2e-66
 Identities = 128/169 (75%), Positives = 143/169 (84%)
 Frame = +1

Query: 103 EGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALTDAQVYSEHAGKPTV 282
           EGEE++PR AKI+KSLL S+GV++YEP V+HQF+ELWYR++VD LTDAQVYSEHA K  +
Sbjct: 3   EGEEDMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKTAI 62

Query: 283 DCDDLKLAIQTKVNASFSQPPPREVLLELARIRNKNPLSKSIAGSGIPLPPEEDTLISPN 462
           DCDD+KLAIQ+KVN SFSQPPPREVLLELAR RNK PL KSIAG GIPLPPE+DTLISPN
Sbjct: 63  DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPN 122

Query: 463 YQFAIPKKHRPQAAEETEEDDVGADENPPQEQKTDPQRQQTPLRVSFPL 609
           YQ AIPKK   QA EETEED+  AD N  QEQKTDP  Q TP RVSFPL
Sbjct: 123 YQLAIPKKRTAQAIEETEEDEESADPNQSQEQKTDPP-QLTPQRVSFPL 170


>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score =  255 bits (652), Expect = 1e-65
 Identities = 128/169 (75%), Positives = 142/169 (84%)
 Frame = +1

Query: 103 EGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALTDAQVYSEHAGKPTV 282
           EG+ENLPR AKI+KSLL S+GV++YEP VIHQF+ELWYR++VD LTDAQVYSEHAGK  +
Sbjct: 3   EGDENLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKSAI 62

Query: 283 DCDDLKLAIQTKVNASFSQPPPREVLLELARIRNKNPLSKSIAGSGIPLPPEEDTLISPN 462
           DCDD+KLAIQ+KVN SFSQPPPREVLLELAR RNK PL KSIAG G+PLPPE+DTLISPN
Sbjct: 63  DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGMPLPPEQDTLISPN 122

Query: 463 YQFAIPKKHRPQAAEETEEDDVGADENPPQEQKTDPQRQQTPLRVSFPL 609
           YQ AIPKK   QA EETEED+  AD N  QE KTD   Q TP RVSFPL
Sbjct: 123 YQLAIPKKQSVQATEETEEDEESADPNSSQEPKTDVP-QGTPQRVSFPL 170


>ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis
           vinifera] gi|297742999|emb|CBI35866.3| unnamed protein
           product [Vitis vinifera]
          Length = 177

 Score =  249 bits (635), Expect = 9e-64
 Identities = 123/173 (71%), Positives = 140/173 (80%)
 Frame = +1

Query: 103 EGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALTDAQVYSEHAGKPTV 282
           EG+E+LPR AKI+KSLL S+GV +YEP VIHQF+ELWYR++VD LTDAQVYSEHA KP +
Sbjct: 3   EGDEDLPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAI 62

Query: 283 DCDDLKLAIQTKVNASFSQPPPREVLLELARIRNKNPLSKSIAGSGIPLPPEEDTLISPN 462
           DCDD+KLAIQ+KVN SFSQPP REVLLELAR RNK PL KSIAG GIPLPPE+DTLISPN
Sbjct: 63  DCDDVKLAIQSKVNFSFSQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPN 122

Query: 463 YQFAIPKKHRPQAAEETEEDDVGADENPPQEQKTDPQRQQTPLRVSFPLVGKR 621
           YQ AIPKK   QA EETEED+ GAD +   ++      Q TP RVSFP+  KR
Sbjct: 123 YQLAIPKKRTAQAVEETEEDEEGADPSHASQEGRTDLPQHTPQRVSFPIGAKR 175


>ref|NP_175816.1| transcription initiation factor TFIID subunit D7 [Arabidopsis
           thaliana] gi|4587557|gb|AAD25788.1|AC006577_24 Similar
           to gb|U21858 transcription initiation factor TFIID 31KD
           subunit (TAFII32) from Homo sapiens [Arabidopsis
           thaliana] gi|7638157|gb|AAF65406.1|AF238327_1 putative
           TATA binding protein associated factor 21kDa subunit
           [Arabidopsis thaliana] gi|21593471|gb|AAM65438.1|
           transcriptional activation factor TAFII32, putative
           [Arabidopsis thaliana] gi|39545926|gb|AAR28026.1| TAF9
           [Arabidopsis thaliana] gi|98960943|gb|ABF58955.1|
           At1g54140 [Arabidopsis thaliana]
           gi|332194933|gb|AEE33054.1| transcription initiation
           factor TFIID subunit D7 [Arabidopsis thaliana]
          Length = 183

 Score =  235 bits (600), Expect = 1e-59
 Identities = 117/175 (66%), Positives = 137/175 (78%), Gaps = 6/175 (3%)
 Frame = +1

Query: 103 EGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALTDAQVYSEHAGKPTV 282
           EGEE++PR AKI+KSLL S+GV++YEP VIHQF+ELWYR++V+ LTDAQVYSEHA KP +
Sbjct: 4   EGEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNI 63

Query: 283 DCDDLKLAIQTKVNASFSQPPPREVLLELARIRNKNPLSKSIAGSGIPLPPEEDTLISPN 462
           DCDD+KLAIQ+KVN SFSQPPPREVLLELA  RNK PL KSIAG G+PLPPE+DTL+SPN
Sbjct: 64  DCDDVKLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPN 123

Query: 463 YQFAIPKKHRPQAAEETEEDDVGAD------ENPPQEQKTDPQRQQTPLRVSFPL 609
           YQ  IPKK      EETE+D+   D      E   Q+Q+T     QTP RVSFPL
Sbjct: 124 YQLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQTPQRVSFPL 178


>gb|AFK39086.1| unknown [Medicago truncatula] gi|388516043|gb|AFK46083.1| unknown
           [Medicago truncatula]
          Length = 179

 Score =  235 bits (599), Expect = 1e-59
 Identities = 119/175 (68%), Positives = 143/175 (81%), Gaps = 1/175 (0%)
 Frame = +1

Query: 88  MVDKEEGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALTDAQVYSEHA 267
           M D EE + N+PR AKIM+SLL S+GV+EYEP VI++F+ELWYR++VD LTDAQVYSEHA
Sbjct: 1   MADNEE-DSNMPRDAKIMQSLLKSMGVEEYEPRVINKFLELWYRYVVDVLTDAQVYSEHA 59

Query: 268 GKPTVDCDDLKLAIQTKVNASFSQPPPREVLLELARIRNKNPLSKSIAGSGIPLPPEEDT 447
           GKP +D DD+KLAIQ++VN SFSQPPPREVLLELA+ RNK PL KSIAG G PLPP++DT
Sbjct: 60  GKPAIDVDDVKLAIQSQVNFSFSQPPPREVLLELAQNRNKIPLPKSIAGPGFPLPPDQDT 119

Query: 448 LISPNYQFAIPKKHRPQAAEETEEDDV-GADENPPQEQKTDPQRQQTPLRVSFPL 609
           LI+PNYQFAIP K   +  EETE+++V  AD NP QE+KTD + Q    RVSFPL
Sbjct: 120 LIAPNYQFAIPNKRSVEPMEETEDEEVPNADPNPSQEEKTDAE-QNPHQRVSFPL 173