BLASTX nr result

ID: Coptis24_contig00013460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013460
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|2...   256   6e-66
ref|XP_004163970.1| PREDICTED: uncharacterized protein LOC101227...   233   4e-59
ref|XP_004136760.1| PREDICTED: uncharacterized protein LOC101209...   231   2e-58
ref|XP_002881756.1| PQ-loop repeat family protein [Arabidopsis l...   225   1e-56
ref|XP_002307928.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56

>ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|222867204|gb|EEF04335.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  256 bits (653), Expect = 6e-66
 Identities = 146/228 (64%), Positives = 166/228 (72%)
 Frame = +3

Query: 27  SSPIPVIAPVLPRYGSLGRELYYMSARSLSKSHTPTAGSVLAQTSDCGITPPVAIHDPHS 206
           SSPIP   P L +  S GRELYYMSARSLS SHTP  GS LAQ      +P  ++ +  S
Sbjct: 162 SSPIPF--PTLFQKSSPGRELYYMSARSLSSSHTPAVGSFLAQRV---ASPSFSMRN--S 214

Query: 207 IEEPLLGALVSTQSAPPSNTKSMLCVISAVTLFLSGFNLHISTTNRHTRIREELPQGVVI 386
           IE+PLLG   +TQSAP  NTK+MLCV+S VTL L   NLH S  NR  R  E   QG VI
Sbjct: 215 IEDPLLGGDATTQSAPNLNTKTMLCVVSVVTL-LGTLNLHQSANNRLARAFENKHQGFVI 273

Query: 387 RVGRKLLQDSATSVLRHGDEVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVEGLSPL 566
           +VGRK+LQ S+     +  E  SGIGTF GW+MA IYMGGRLPQI LNIKRGNVEGL+PL
Sbjct: 274 QVGRKILQASSRMSHENYSE-GSGIGTFLGWSMAAIYMGGRLPQIFLNIKRGNVEGLNPL 332

Query: 567 MFIFALVGNMTYVASILVSSIERSKIIANLPWLVDAGGCVLLDTCVSL 710
           MF+FAL+GN+TYVASILV S+  SKI ANLPWLVDAGGCVLLDTC+ L
Sbjct: 333 MFVFALIGNITYVASILVDSVAWSKISANLPWLVDAGGCVLLDTCILL 380


>ref|XP_004163970.1| PREDICTED: uncharacterized protein LOC101227133 [Cucumis sativus]
          Length = 420

 Score =  233 bits (594), Expect = 4e-59
 Identities = 132/226 (58%), Positives = 159/226 (70%)
 Frame = +3

Query: 27  SSPIPVIAPVLPRYGSLGRELYYMSARSLSKSHTPTAGSVLAQTSDCGITPPVAIHDPHS 206
           +SPIP+  P+L +  S GRELYYMSARSLS+SHTPT+GS L Q     +TPP  IH+P  
Sbjct: 180 TSPIPL--PMLRQNSSTGRELYYMSARSLSRSHTPTSGSFLRQK----MTPPY-IHNP-- 230

Query: 207 IEEPLLGALVSTQSAPPSNTKSMLCVISAVTLFLSGFNLHISTTNRHTRIREELPQGVVI 386
           ++EPLL     + +A P N K+MLC++  +T F S  N H S  +R   + +   +G VI
Sbjct: 231 MQEPLLDGNEPSSAARPPNVKTMLCLVFMLTFF-STLNHHHSAESRFYSVSDNSNKGFVI 289

Query: 387 RVGRKLLQDSATSVLRHGDEVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVEGLSPL 566
            VGRKLLQ +        +    GIGT+ GWAMA+IYMGGRLPQICLNIKRG+VEGLSPL
Sbjct: 290 PVGRKLLQVAGVLQNNVNEGGGGGIGTYLGWAMAVIYMGGRLPQICLNIKRGHVEGLSPL 349

Query: 567 MFIFALVGNMTYVASILVSSIERSKIIANLPWLVDAGGCVLLDTCV 704
           MFIFAL+GN TYVASILVSS   SKI  NLPWLVDA GCVLLDT +
Sbjct: 350 MFIFALIGNSTYVASILVSSTSWSKIKPNLPWLVDAFGCVLLDTFI 395


>ref|XP_004136760.1| PREDICTED: uncharacterized protein LOC101209754 [Cucumis sativus]
          Length = 420

 Score =  231 bits (589), Expect = 2e-58
 Identities = 131/226 (57%), Positives = 158/226 (69%)
 Frame = +3

Query: 27  SSPIPVIAPVLPRYGSLGRELYYMSARSLSKSHTPTAGSVLAQTSDCGITPPVAIHDPHS 206
           +SPIP+  P+L +  S GRELYYMSARSLS+SHTPT+GS L Q     +TPP  IH+P  
Sbjct: 180 TSPIPL--PMLRQNSSTGRELYYMSARSLSRSHTPTSGSFLRQK----MTPPY-IHNP-- 230

Query: 207 IEEPLLGALVSTQSAPPSNTKSMLCVISAVTLFLSGFNLHISTTNRHTRIREELPQGVVI 386
           ++EPLL     + +  P N K+MLC++  +T F S  N H S  +R   + +   +G VI
Sbjct: 231 MQEPLLDGNEPSSAPRPPNVKTMLCLVFMLTFF-STLNHHHSAESRFYSVSDNSNKGFVI 289

Query: 387 RVGRKLLQDSATSVLRHGDEVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVEGLSPL 566
            VGRKLLQ +        +    GIGT+ GWAMA+IYMGGRLPQICLNIKRG+VEGLSPL
Sbjct: 290 PVGRKLLQVAGVLQNNVNEGGGGGIGTYLGWAMAVIYMGGRLPQICLNIKRGHVEGLSPL 349

Query: 567 MFIFALVGNMTYVASILVSSIERSKIIANLPWLVDAGGCVLLDTCV 704
           MFIFAL+GN TYVASILVSS   SKI  NLPWLVDA GCVLLDT +
Sbjct: 350 MFIFALIGNSTYVASILVSSTSWSKIKPNLPWLVDAFGCVLLDTFI 395


>ref|XP_002881756.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327595|gb|EFH58015.1| PQ-loop repeat family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 380

 Score =  225 bits (573), Expect = 1e-56
 Identities = 133/236 (56%), Positives = 157/236 (66%)
 Frame = +3

Query: 3   DVSQGAPQSSPIPVIAPVLPRYGSLGRELYYMSARSLSKSHTPTAGSVLAQTSDCGITPP 182
           D +    Q++PI +I P   R    GREL+Y SARSLS SHTP AGSVLAQ    G    
Sbjct: 131 DTTTCGGQTTPITMI-PGSHRTSFTGRELFYTSARSLSSSHTPPAGSVLAQRMARG---- 185

Query: 183 VAIHDPHSIEEPLLGALVSTQSAPPSNTKSMLCVISAVTLFLSGFNLHISTTNRHTRIRE 362
              H   ++EEPLL    +  S PPS TKSMLCV+S V LFL  FNL    +   T    
Sbjct: 186 ---HSEPTLEEPLLPGDSTPPSLPPS-TKSMLCVVS-VFLFLGTFNLPNMLSESRTMALG 240

Query: 363 ELPQGVVIRVGRKLLQDSATSVLRHGDEVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRG 542
           E  +  V+R  RKLLQ ++++V  H    SS IG F GWAMA IYMGGRLPQICLN++RG
Sbjct: 241 ERDRVFVVRAARKLLQVTSSNVGEHSGGESSRIGMFLGWAMAAIYMGGRLPQICLNMRRG 300

Query: 543 NVEGLSPLMFIFALVGNMTYVASILVSSIERSKIIANLPWLVDAGGCVLLDTCVSL 710
           +VEGL+PLMF FALVGNMTYVASILV+S+E  KI  NLPWLVDAGGCV+LD  + L
Sbjct: 301 HVEGLNPLMFFFALVGNMTYVASILVNSVEWLKIAPNLPWLVDAGGCVVLDFLILL 356


>ref|XP_002307928.1| predicted protein [Populus trichocarpa] gi|222853904|gb|EEE91451.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  224 bits (571), Expect = 2e-56
 Identities = 134/235 (57%), Positives = 155/235 (65%), Gaps = 7/235 (2%)
 Frame = +3

Query: 27  SSPIPVIAPVLPRYGSLGRELYYMSARSLSKSHTPTAGSVLAQTSDCGITPPVAIHDPHS 206
           SSPIP   P LP+  S  R+LYY SARSLS SHTPT GS LAQ +    TPP +    +S
Sbjct: 138 SSPIPF--PTLPQKSSPERDLYYASARSLSSSHTPTVGSFLAQRT----TPP-SFSIRNS 190

Query: 207 IEEPLLGALVSTQSAPPSNTKSMLCV------ISAVTLFLSGFNLHISTTNRHTRIREEL 368
           IEEPLLG  V+TQSAP  NTK+ML        +S VT FL   NLH S  +R        
Sbjct: 191 IEEPLLGEDVATQSAPNLNTKTMLFTDNFLFQVSVVT-FLGTLNLHHSANSR-------- 241

Query: 369 PQGVVIRVGRKLLQDSATSVLRHGDEVSSG-IGTFFGWAMAIIYMGGRLPQICLNIKRGN 545
                         D  +S++ H +++    IGTF GW+MA IYMGGRLPQICLNIKRG 
Sbjct: 242 -------------LDRTSSIMSHENDIDGNVIGTFLGWSMAAIYMGGRLPQICLNIKRGK 288

Query: 546 VEGLSPLMFIFALVGNMTYVASILVSSIERSKIIANLPWLVDAGGCVLLDTCVSL 710
           VEGL+PLMF+FALVGN+TYVASILV S+  SKI ANLPWLVDAGGCVLLDTC+ L
Sbjct: 289 VEGLNPLMFVFALVGNITYVASILVDSLAWSKIRANLPWLVDAGGCVLLDTCILL 343


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