BLASTX nr result

ID: Coptis24_contig00013455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013455
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]      145   3e-33
ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...   134   8e-30
gb|AFV15381.1| AGO4A [Solanum lycopersicum]                           133   2e-29
ref|XP_002279115.2| PREDICTED: protein argonaute 4A-like [Vitis ...   130   1e-28
emb|CBI32885.3| unnamed protein product [Vitis vinifera]              130   1e-28

>gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]
          Length = 933

 Score =  145 bits (366), Expect = 3e-33
 Identities = 67/84 (79%), Positives = 76/84 (90%)
 Frame = +2

Query: 2   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCNQQLFSLKQKNGNANGDVQTVEVTVS 181
           +DWAKAKRTLKNLRIK SP+NTEYKITGLSE  C +Q+FSLKQK+GN NG+ +T+EVTV 
Sbjct: 317 LDWAKAKRTLKNLRIKTSPANTEYKITGLSEKPCKEQMFSLKQKSGNENGEAETLEVTVY 376

Query: 182 DYFVNYRNIQLRYSGDLPCINVGK 253
           DYFVNYR I+LRYSGDLPCINVGK
Sbjct: 377 DYFVNYRKIELRYSGDLPCINVGK 400


>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/85 (74%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCNQQLFSLKQKNG-NANGDVQTVEVTV 178
           +DWAKAK+ LKNLR+K SPSNTEYKITGLSE  C +QLF+LKQ+NG + NG+ QT+EVTV
Sbjct: 297 LDWAKAKKMLKNLRVKTSPSNTEYKITGLSEKPCKEQLFTLKQRNGKDENGEAQTIEVTV 356

Query: 179 SDYFVNYRNIQLRYSGDLPCINVGK 253
            DYFVN+R I+LRYS DLPCINVGK
Sbjct: 357 FDYFVNHRRIELRYSADLPCINVGK 381


>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
          Length = 909

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCNQQLFSLKQKNGNANGDVQTVEVTVS 181
           +DWAKAKR LKNLR+K +P+N EYKITGLS+  C +QLF+LKQK  +A+G+VQT EVTV 
Sbjct: 295 LDWAKAKRVLKNLRVKTTPTNQEYKITGLSDRPCREQLFTLKQKGKDADGEVQTTEVTVF 354

Query: 182 DYFVNYRNIQLRYSGDLPCINVGK 253
           DYFVN+RNI+LRYS DLPCINVGK
Sbjct: 355 DYFVNHRNIELRYSADLPCINVGK 378


>ref|XP_002279115.2| PREDICTED: protein argonaute 4A-like [Vitis vinifera]
          Length = 866

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/84 (69%), Positives = 70/84 (83%)
 Frame = +2

Query: 2   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCNQQLFSLKQKNGNANGDVQTVEVTVS 181
           +DW+KAKRTLKNLRIK  PSN+EY+I GLSE  C +Q+F+LK +  N N D +++EVTV 
Sbjct: 250 LDWSKAKRTLKNLRIKVKPSNSEYRIVGLSESPCKEQMFTLKNRGKNGNDDAESIEVTVY 309

Query: 182 DYFVNYRNIQLRYSGDLPCINVGK 253
           DYFVNYR I+LRYSGDLPCINVGK
Sbjct: 310 DYFVNYRQIELRYSGDLPCINVGK 333


>emb|CBI32885.3| unnamed protein product [Vitis vinifera]
          Length = 879

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/84 (69%), Positives = 70/84 (83%)
 Frame = +2

Query: 2   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCNQQLFSLKQKNGNANGDVQTVEVTVS 181
           +DW+KAKRTLKNLRIK  PSN+EY+I GLSE  C +Q+F+LK +  N N D +++EVTV 
Sbjct: 253 LDWSKAKRTLKNLRIKVKPSNSEYRIVGLSESPCKEQMFTLKNRGKNGNDDAESIEVTVY 312

Query: 182 DYFVNYRNIQLRYSGDLPCINVGK 253
           DYFVNYR I+LRYSGDLPCINVGK
Sbjct: 313 DYFVNYRQIELRYSGDLPCINVGK 336


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