BLASTX nr result

ID: Coptis24_contig00013454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013454
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]      145   3e-33
gb|AFV15381.1| AGO4A [Solanum lycopersicum]                           140   8e-32
gb|AFV15382.1| AGO4B [Solanum lycopersicum]                           135   3e-30
ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...   135   5e-30
ref|XP_002279115.2| PREDICTED: protein argonaute 4A-like [Vitis ...   134   1e-29

>gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]
          Length = 933

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/85 (78%), Positives = 77/85 (90%)
 Frame = +1

Query: 1   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELPCNQQLFSLKQKNVNADGDVQTVEVTVS 180
           +DWAKAKRTLKNLRIK SP+NTEYKITGLSE PC +Q+FSLKQK+ N +G+ +T+EVTV 
Sbjct: 317 LDWAKAKRTLKNLRIKTSPANTEYKITGLSEKPCKEQMFSLKQKSGNENGEAETLEVTVY 376

Query: 181 DYFVNYRNIQLRYSGDLPCINVGKP 255
           DYFVNYR I+LRYSGDLPCINVGKP
Sbjct: 377 DYFVNYRKIELRYSGDLPCINVGKP 401


>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
          Length = 909

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/85 (75%), Positives = 75/85 (88%)
 Frame = +1

Query: 1   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELPCNQQLFSLKQKNVNADGDVQTVEVTVS 180
           +DWAKAKR LKNLR+K +P+N EYKITGLS+ PC +QLF+LKQK  +ADG+VQT EVTV 
Sbjct: 295 LDWAKAKRVLKNLRVKTTPTNQEYKITGLSDRPCREQLFTLKQKGKDADGEVQTTEVTVF 354

Query: 181 DYFVNYRNIQLRYSGDLPCINVGKP 255
           DYFVN+RNI+LRYS DLPCINVGKP
Sbjct: 355 DYFVNHRNIELRYSADLPCINVGKP 379


>gb|AFV15382.1| AGO4B [Solanum lycopersicum]
          Length = 913

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/85 (71%), Positives = 74/85 (87%)
 Frame = +1

Query: 1   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELPCNQQLFSLKQKNVNADGDVQTVEVTVS 180
           +DWAKAKR LKNLR+K +P+N E+KITGLSE PC +Q+F+LKQK+ + DG+VQT EVTV 
Sbjct: 298 LDWAKAKRVLKNLRVKTAPANQEFKITGLSEKPCREQMFTLKQKSKDEDGEVQTSEVTVY 357

Query: 181 DYFVNYRNIQLRYSGDLPCINVGKP 255
           DYFVN+RNI LRYS DLPC+NVGKP
Sbjct: 358 DYFVNHRNIDLRYSADLPCLNVGKP 382


>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score =  135 bits (339), Expect = 5e-30
 Identities = 63/86 (73%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELPCNQQLFSLKQKN-VNADGDVQTVEVTV 177
           +DWAKAK+ LKNLR+K SPSNTEYKITGLSE PC +QLF+LKQ+N  + +G+ QT+EVTV
Sbjct: 297 LDWAKAKKMLKNLRVKTSPSNTEYKITGLSEKPCKEQLFTLKQRNGKDENGEAQTIEVTV 356

Query: 178 SDYFVNYRNIQLRYSGDLPCINVGKP 255
            DYFVN+R I+LRYS DLPCINVGKP
Sbjct: 357 FDYFVNHRRIELRYSADLPCINVGKP 382


>ref|XP_002279115.2| PREDICTED: protein argonaute 4A-like [Vitis vinifera]
          Length = 866

 Score =  134 bits (336), Expect = 1e-29
 Identities = 59/85 (69%), Positives = 72/85 (84%)
 Frame = +1

Query: 1   IDWAKAKRTLKNLRIKASPSNTEYKITGLSELPCNQQLFSLKQKNVNADGDVQTVEVTVS 180
           +DW+KAKRTLKNLRIK  PSN+EY+I GLSE PC +Q+F+LK +  N + D +++EVTV 
Sbjct: 250 LDWSKAKRTLKNLRIKVKPSNSEYRIVGLSESPCKEQMFTLKNRGKNGNDDAESIEVTVY 309

Query: 181 DYFVNYRNIQLRYSGDLPCINVGKP 255
           DYFVNYR I+LRYSGDLPCINVGKP
Sbjct: 310 DYFVNYRQIELRYSGDLPCINVGKP 334


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